Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.2YN0NK Arachis hypogaea HOM05D003116 ORTHO05D003619 1.4e-99 366.3 190 100.0
arahy.Tifrunner.gnm1.ann1.3K81QB Arachis hypogaea HOM05D003116 ORTHO05D003619 3.2e-59 232.3 211 64.9
arahy.Tifrunner.gnm1.ann1.UXIK5Z Arachis hypogaea HOM05D003116 ORTHO05D003619 1.6e-58 229.9 217 64.1
arahy.Tifrunner.gnm1.ann1.3K1ZLN Arachis hypogaea HOM05D003116 ORTHO05D003619 1.3e-57 226.9 224 62.9
arahy.Tifrunner.gnm1.ann1.U29Z63 Arachis hypogaea HOM05D003116 ORTHO05D003619 6.6e-57 224.6 211 63.0
arahy.Tifrunner.gnm1.ann1.PEQF49 Arachis hypogaea HOM05D000048 ORTHO05D003619 2.5e-56 222.6 224 60.7
arahy.Tifrunner.gnm1.ann1.T6DYUJ Arachis hypogaea HOM05D003116 ORTHO05D003619 1.6e-55 219.9 211 62.1
arahy.Tifrunner.gnm1.ann1.9H48GU Arachis hypogaea HOM05D003116 ORTHO05D085597 4.6e-34 148.7 108 75.0
Medtr7g102760 Medicago truncatula HOM05D003116 ORTHO05D003619 2.2e-28 129.8 217 44.7
Lalb_Chr25g0288771 Lupinus albus HOM05D003116 ORTHO05D003619 1.4e-27 127.1 224 40.6
Psat3g038280 Pisum sativum HOM05D003116 ORTHO05D003619 6.7e-25 118.2 218 44.0
Lj1g0028191 Lotus japonicus HOM05D003116 ORTHO05D003619 1.5e-21 107.1 230 37.0
Glyma.19G188500 Glycine max HOM05D003116 ORTHO05D003619 2.5e-19 99.8 225 36.0
VMungo1383G1045 Vigna mungo HOM05D003116 ORTHO05D003619 8.8e-17 91.3 226 34.5
Phvul.001G183700 Phaseolus vulgaris HOM05D003116 ORTHO05D003619 1.1e-16 90.9 226 33.2
Dinv37361 Davidia involucrata HOM05D003116 ORTHO05D003619 1.7e-15 87.0 226 32.7
DCAR_014783 Daucus carota HOM05D003116 ORTHO05D003619 8.2e-15 84.7 192 34.4
TAR636G1518 Trochodendron aralioides HOM05D003116 ORTHO05D003619 1.4e-14 84.0 219 33.8
TAR625G1207 Trochodendron aralioides HOM05D003116 ORTHO05D003619 6.9e-14 81.6 219 33.8
Thecc.05G075800 Theobroma cacao HOM05D003116 ORTHO05D003619 1.5e-13 80.5 223 28.7
Peaxi162Scf00110g00082 Petunia axillaris HOM05D003116 ORTHO05D003619 5.9e-13 78.6 223 28.7
TAR636G2277 Trochodendron aralioides HOM05D003116 ORTHO05D003619 7.7e-13 78.2 170 35.3
TAR636G1363 Trochodendron aralioides HOM05D003116 ORTHO05D003619 3.8e-12 75.9 219 32.4
Cc02_g09220 Coffea canephora HOM05D003116 ORTHO05D003619 5.5e-11 72.0 226 30.5
CDE02G2540 Ceratophyllum demersum HOM05D003116 ORTHO05D003619 7.2e-11 71.6 225 29.3
Duzib128G1204 Durio zibethinus HOM05D003116 ORTHO05D003619 7.2e-11 71.6 224 27.2
Sopen04g004940 Solanum pennellii HOM05D003116 ORTHO05D003619 7.2e-11 71.6 227 31.7
Solyc04g009810.3 Solanum lycopersicum HOM05D003116 ORTHO05D003619 9.4e-11 71.2 227 31.7
Nn3g20158 Nelumbo nucifera HOM05D003116 ORTHO05D003619 2.1e-10 70.1 227 31.3
Nitab4.5_0009004g0010 Nicotiana tabacum HOM05D003116 ORTHO05D003619 2.1e-10 70.1 227 31.7
GSVIVG01033716001 Vitis vinifera HOM05D003116 ORTHO05D003619 2.7e-10 69.7 203 32.5
CSS0019916 Camellia sinensis var. sinensis HOM05D003116 ORTHO05D003619 3.6e-10 69.3 227 30.4
Hma1.2p1_0171F.1_g075610 Hydrangea macrophylla HOM05D003116 ORTHO05D003619 3.6e-10 69.3 227 30.8
Lsat_1_v5_gn_8_2981 Lactuca sativa HOM05D003116 ORTHO05D003619 3.6e-10 69.3 227 30.8
PGSC0003DMG400025436 Solanum tuberosum HOM05D003116 ORTHO05D003619 3.6e-10 69.3 227 31.7
TAR636G0211 Trochodendron aralioides HOM05D003116 ORTHO05D003619 3.6e-10 69.3 227 30.8
AagrBONN_evm.TU.Sc2ySwM_344.2897 Anthoceros agrestis HOM05D003116 ORTHO05D003619 4.7e-10 68.9 224 29.0
CiPaw.02G065200 Carya illinoinensis HOM05D003116 ORTHO05D003619 6.1e-10 68.6 228 30.3
ECA233G1402 Erigeron canadensis HOM05D003116 ORTHO05D003619 6.1e-10 68.6 227 30.4
Gohir.A04G068200 Gossypium hirsutum HOM05D003116 ORTHO05D003619 7.9e-10 68.2 199 29.6
Ah.13g070600 Amaranthus hybridus HOM05D003116 ORTHO05D003619 1.0e-09 67.8 225 29.8
A03p57410 Brassica napus HOM05D003116 ORTHO05D003619 1.0e-09 67.8 238 28.2
Ciclev10023555m.g Citrus clementina HOM05D003116 ORTHO05D003619 1.0e-09 67.8 221 29.4
BcaNung01649 Brassica carinata HOM05D003116 ORTHO05D003619 1.4e-09 67.4 226 30.5
Manes.08G104900 Manihot esculenta HOM05D003116 ORTHO05D003619 1.4e-09 67.4 227 30.0
Aa31LG7G11540 Aethionema arabicum HOM05D003116 ORTHO05D003619 1.8e-09 67.0 226 29.6
EL10Ac1g01549 Beta vulgaris HOM05D003116 ORTHO05D003619 1.8e-09 67.0 226 29.2
HPP92_011793 Vanilla planifolia HOM05D003116 ORTHO05D003619 1.8e-09 67.0 220 30.0
AL7G25070 Arabidopsis lyrata HOM05D003116 ORTHO05D003619 2.3e-09 66.6 226 30.1
Gohir.D08G244300 Gossypium hirsutum HOM05D003116 ORTHO05D003619 2.3e-09 66.6 225 29.8
Gorai.004G260600 Gossypium raimondii HOM05D003116 ORTHO05D003619 2.3e-09 66.6 225 29.8
Nitab4.5_0007901g0020 Nicotiana tabacum HOM05D003116 ORTHO05D003619 2.3e-09 66.6 227 31.3
Aqoxy5G00402 Aquilegia oxysepala HOM05D003116 ORTHO05D003619 3.0e-09 66.2 227 29.5
AT4G27650 Arabidopsis thaliana HOM05D003116 ORTHO05D003619 3.0e-09 66.2 226 29.6
A01p18940 Brassica napus HOM05D003116 ORTHO05D003619 3.0e-09 66.2 226 30.1
TPR.G14663 Trifolium pratense HOM05D003116 ORTHO05D003619 3.0e-09 66.2 227 28.6
BcaC06g32676 Brassica carinata HOM05D003116 ORTHO05D003619 3.9e-09 65.9 226 28.8
SGA_v2.0_scaffold7G04085 Striga asiatica HOM05D003116 ORTHO05D003619 3.9e-09 65.9 221 29.9
Actinidia38911 Actinidia chinensis HOM05D003116 ORTHO05D003619 5.1e-09 65.5 227 30.0
ATR0609G064 Amborella trichopoda HOM05D003116 ORTHO05D003619 5.1e-09 65.5 220 28.6
CARHR235350 Cardamine hirsuta HOM05D003116 ORTHO05D003619 5.1e-09 65.5 226 28.8
AUR62036544 Chenopodium quinoa HOM05D003116 ORTHO05D003619 5.1e-09 65.5 227 28.2
FAN09G4293 Fragaria x ananassa HOM05D003116 ORTHO05D003619 5.1e-09 65.5 205 29.3
TWI14G0774 Tripterygium wilfordii HOM05D003116 ORTHO05D003619 5.1e-09 65.5 227 29.5
EL10Ac4g09413 Beta vulgaris HOM05D003116 ORTHO05D003619 6.7e-09 65.1 226 27.9
CARHR168750 Cardamine hirsuta HOM05D003116 ORTHO05D003619 6.7e-09 65.1 224 29.5
Eucgr.B01382 Eucalyptus grandis HOM05D003116 ORTHO05D003619 6.7e-09 65.1 227 30.0
MD12G1258200 Malus domestica HOM05D003116 ORTHO05D003619 6.7e-09 65.1 228 31.1
Medtr1g078400 Medicago truncatula HOM05D003116 ORTHO05D003619 6.7e-09 65.1 227 29.1
Thecc.05G204800 Theobroma cacao HOM05D003116 ORTHO05D003619 6.7e-09 65.1 225 29.8
Oeu033264.1 Olea europaea HOM05D003116 ORTHO05D003619 8.8e-09 64.7 227 30.0
Aa31LG7G11530 Aethionema arabicum HOM05D003116 ORTHO05D003619 1.1e-08 64.3 228 27.6
AUR62006711 Chenopodium quinoa HOM05D003116 ORTHO05D003619 1.1e-08 64.3 226 30.1
AUR62006712 Chenopodium quinoa HOM05D003116 ORTHO05D003619 1.1e-08 64.3 226 30.1
Sp7g25620 Schrenkiella parvula HOM05D003116 ORTHO05D003619 1.1e-08 64.3 226 30.5
Hund07322 Selenicereus undatus HOM05D003116 ORTHO05D003619 1.1e-08 64.3 226 29.2
Gohir.A08G224000 Gossypium hirsutum HOM05D003116 ORTHO05D003619 1.5e-08 63.9 225 28.9
HanXRQChr05g0156871 Helianthus annuus HOM05D003116 ORTHO05D003619 1.5e-08 63.9 227 30.0
Mapoly0014s0040 Marchantia polymorpha HOM05D003116 ORTHO05D003619 1.5e-08 63.9 221 27.6
PGSC0003DMG400028274 Solanum tuberosum HOM05D003116 ORTHO05D003619 1.5e-08 63.9 233 25.8
Carub.0007s1320 Capsella rubella HOM05D003116 ORTHO05D003619 2.0e-08 63.5 226 29.6
AUR62000365 Chenopodium quinoa HOM05D003116 ORTHO05D003619 2.0e-08 63.5 226 30.1
FAN14G1801 Fragaria x ananassa HOM05D003116 ORTHO05D003619 2.0e-08 63.5 205 29.8
Actinidia39860 Actinidia chinensis HOM05D003116 ORTHO05D003619 2.6e-08 63.2 69 42.0
Duzib128G0562 Durio zibethinus HOM05D003116 ORTHO05D003619 2.6e-08 63.2 225 28.9
Duzib177G0648 Durio zibethinus HOM05D003116 ORTHO05D003619 2.6e-08 63.2 237 29.5
Thhalv10025473m.g Eutrema salsugineum HOM05D003116 ORTHO05D003619 2.6e-08 63.2 226 30.1
FAN02G4520 Fragaria x ananassa HOM05D003116 ORTHO05D003619 2.6e-08 63.2 205 29.8
Zm00001eb067580 Zea mays HOM05D003116 ORTHO05D003619 3.3e-08 62.8 221 30.3
MSTRG.9020 Avicennia marina HOM05D003116 ORTHO05D003619 4.4e-08 62.4 227 29.5
FAN05G5198 Fragaria x ananassa HOM05D003116 ORTHO05D003619 4.4e-08 62.4 208 26.4
CANSAT54G1522 Cannabis sativa HOM05D003116 ORTHO05D003619 5.7e-08 62.0 228 30.3
Ciclev10013675m.g Citrus clementina HOM05D003116 ORTHO05D003619 5.7e-08 62.0 227 28.6
Peaxi162Scf00135g01111 Petunia axillaris HOM05D003116 ORTHO05D003619 5.7e-08 62.0 227 29.5
TPR.G14646 Trifolium pratense HOM05D003116 ORTHO05D003619 5.7e-08 62.0 227 28.6
arahy.Tifrunner.gnm1.ann1.9IK2W2 Arachis hypogaea HOM05D003116 ORTHO05D003619 7.4e-08 61.6 228 29.8
Lj5g0010554 Lotus japonicus HOM05D003116 ORTHO05D003619 7.4e-08 61.6 227 28.6
Nitab4.5_0000132g0470 Nicotiana tabacum HOM05D003116 ORTHO05D003619 7.4e-08 61.6 68 44.1
Potri.005G204500 Populus trichocarpa HOM05D003116 ORTHO05D003619 7.4e-08 61.6 225 27.1
SEGI_30925 Sequoiadendron giganteum HOM05D003116 ORTHO05D003619 7.4e-08 61.6 220 26.8
Lalb_Chr06g0168431 Lupinus albus HOM05D003116 ORTHO05D003619 9.7e-08 61.2 228 29.8
Sc25g0001710 Simmondsia chinensis HOM05D003116 ORTHO05D003619 9.7e-08 61.2 227 29.5
Atru.chr12.2147 Acer truncatum HOM05D003116 ORTHO05D003619 1.3e-07 60.8 227 27.8
Migut.F01553 Erythranthe guttata HOM05D003116 ORTHO05D003619 1.3e-07 60.8 223 30.0
Glyma.20G219800 Glycine max HOM05D003116 ORTHO05D003619 1.3e-07 60.8 228 28.9
Actinidia29561 Actinidia chinensis HOM05D003116 ORTHO05D003619 1.7e-07 60.5 200 32.5
Glyma.10G170200 Glycine max HOM05D003116 ORTHO05D003619 1.7e-07 60.5 228 28.5
C07p55620 Brassica napus HOM05D003116 ORTHO05D003619 2.2e-07 60.1 226 28.8
MD04G1241200 Malus domestica HOM05D003116 ORTHO05D003619 2.2e-07 60.1 227 30.0
PSO357G0261 Papaver somniferum HOM05D003116 ORTHO05D003619 2.2e-07 60.1 226 27.4
Psat6g052120 Pisum sativum HOM05D003116 ORTHO05D003619 2.2e-07 60.1 227 27.8
THA.LOC104821795 Tarenaya hassleriana HOM05D003116 ORTHO05D003619 2.2e-07 60.1 229 28.4
AUR62031139 Chenopodium quinoa HOM05D003116 ORTHO05D003619 2.8e-07 59.7 210 28.6
FvH4_6g17270 Fragaria vesca HOM05D003116 ORTHO05D003619 2.8e-07 59.7 209 26.3
Os04g0659900 Oryza sativa ssp. japonica HOM05D003116 ORTHO05D003619 2.8e-07 59.7 221 29.9
PGR119G1776 Punica granatum HOM05D003116 ORTHO05D003619 2.8e-07 59.7 227 28.6
RcHm_v2.0_Chr3g0448271 Rosa chinensis HOM05D003116 ORTHO05D003619 2.8e-07 59.7 228 28.9
GSVIVG01019146001 Vitis vinifera HOM05D003116 ORTHO05D003619 2.8e-07 59.7 227 28.2
Sabra05G0155200 Salix brachista HOM05D003116 ORTHO05D003619 4.8e-07 58.9 235 26.4
BraA03t14807Z Brassica rapa HOM05D003116 ORTHO05D003619 6.3e-07 58.5 229 29.3
MELO3C008594.2 Cucumis melo HOM05D003116 ORTHO05D003619 8.2e-07 58.2 228 28.5
FAN05G0861 Fragaria x ananassa HOM05D003116 ORTHO05D003619 8.2e-07 58.2 197 29.4
C01p23890 Brassica napus HOM05D003116 ORTHO05D003619 1.1e-06 57.8 228 27.6
BraA01t01835Z Brassica rapa HOM05D003116 ORTHO05D003619 1.1e-06 57.8 230 28.7
Atru.chr8.1701 Acer truncatum HOM05D003116 ORTHO05D003619 1.4e-06 57.4 171 30.4
CsaV3_2G010350 Cucumis sativus L. HOM05D003116 ORTHO05D003619 1.4e-06 57.4 228 28.5
Prupe.6G358700 Prunus persica HOM05D003116 ORTHO05D003619 1.4e-06 57.4 228 28.5
BcaC09g50563 Brassica carinata HOM05D003116 ORTHO05D003619 1.8e-06 57.0 212 26.9
COL.COLO4_22257 Corchorus olitorius HOM05D003116 ORTHO05D003619 1.8e-06 57.0 221 26.7
VMungo0720G2849 Vigna mungo HOM05D003116 ORTHO05D003619 1.8e-06 57.0 228 27.6
arahy.Tifrunner.gnm1.ann1.6AR5V7 Arachis hypogaea HOM05D003116 ORTHO05D003619 2.4e-06 56.6 220 29.5
Hund20972 Selenicereus undatus HOM05D003116 ORTHO05D382736 2.4e-06 56.6 60 48.3
BcaB04g18111 Brassica carinata HOM05D003116 ORTHO05D003619 3.1e-06 56.2 55 49.1
PSO210G3889 Papaver somniferum HOM05D003116 ORTHO05D003619 3.1e-06 56.2 227 27.8
SMO356G0619 Selaginella moellendorffii HOM05D003116 ORTHO05D003619 4.1e-06 55.8 221 25.8
ClCG11G007480 Citrullus lanatus HOM05D003116 ORTHO05D003619 5.3e-06 55.5 235 28.5
FvH4_6g00790 Fragaria vesca HOM05D003116 ORTHO05D003619 7.0e-06 55.1 222 27.0
Phvul.010G077790 Phaseolus vulgaris HOM05D003116 ORTHO05D003619 7.0e-06 55.1 227 26.4
RcHm_v2.0_Chr4g0442151 Rosa chinensis HOM05D003116 ORTHO05D003619 9.1e-06 54.7 228 27.2


User provided reference genes

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