Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.2XNM6Q Arachis hypogaea HOM05D007134 ORTHO05D009004 4.1e-206 721.1 344 100.0
arahy.Tifrunner.gnm1.ann1.40JZG2 Arachis hypogaea HOM05D007134 ORTHO05D009004 1.5e-187 659.4 322 96.3
Glyma.17G154600 Glycine max HOM05D007134 ORTHO05D009004 3.6e-146 521.9 322 76.7
Ca_22068_v3 Cicer arietinum L. HOM05D007134 ORTHO05D009004 4.8e-146 521.5 320 75.9
Glyma.05G112400 Glycine max HOM05D007134 ORTHO05D009004 6.2e-146 521.2 319 77.1
TPR.G28658 Trifolium pratense HOM05D007134 ORTHO05D009004 1.8e-145 519.6 321 76.3
Phvul.003G230000 Phaseolus vulgaris HOM05D007134 ORTHO05D009004 9.0e-145 517.3 319 76.8
Lj4g0007831 Lotus japonicus HOM05D007134 ORTHO05D009004 4.4e-144 515.0 319 74.0
Lalb_Chr05g0220571 Lupinus albus HOM05D007134 ORTHO05D009004 1.0e-140 503.8 320 74.7
Psat4g079040 Pisum sativum HOM05D007134 ORTHO05D009004 3.0e-140 502.3 320 75.0
CiPaw.11G091800 Carya illinoinensis HOM05D007134 ORTHO05D009004 1.5e-128 463.4 320 68.1
Cfa012416 Carpinus fangiana HOM05D007134 ORTHO05D009004 2.5e-126 456.1 320 67.5
Haze_08260 Corylus avellana HOM05D007134 ORTHO05D009004 7.4e-123 444.5 334 65.0
Potri.001G144000 Populus trichocarpa HOM05D007134 ORTHO05D009004 6.9e-121 438.0 295 68.5
Actinidia03384 Actinidia chinensis HOM05D007134 ORTHO05D009004 1.2e-120 437.2 298 68.1
TAR629G3531 Trochodendron aralioides HOM05D007134 ORTHO05D009004 1.5e-120 436.8 321 63.9
GSVIVG01013189001 Vitis vinifera HOM05D007134 ORTHO05D009004 2.6e-120 436.0 290 71.7
CSS0021568 Camellia sinensis var. sinensis HOM05D007134 ORTHO05D009004 3.4e-120 435.6 298 68.1
Atru.chr6.1744 Acer truncatum HOM05D007134 ORTHO05D009004 5.8e-120 434.9 296 68.9
Thecc.03G230400 Theobroma cacao HOM05D007134 ORTHO05D009004 2.2e-119 433.0 296 67.9
Dinv28939 Davidia involucrata HOM05D007134 ORTHO05D009004 5.0e-119 431.8 316 65.8
Manes.15G172000 Manihot esculenta HOM05D007134 ORTHO05D009004 1.1e-118 430.6 296 69.6
COL.COLO4_17065 Corchorus olitorius HOM05D007134 ORTHO05D009004 1.9e-118 429.9 295 67.8
Gohir.D12G211900 Gossypium hirsutum HOM05D007134 ORTHO05D009004 1.2e-117 427.2 298 68.8
Gorai.008G227500 Gossypium raimondii HOM05D007134 ORTHO05D009004 1.2e-117 427.2 298 68.8
Duzib205G1618 Durio zibethinus HOM05D007134 ORTHO05D009004 4.6e-117 425.2 296 68.2
Lj8A293T18 Lonicera japonica HOM05D007134 ORTHO05D009004 1.8e-116 423.3 298 66.8
Peaxi162Scf00006g04220 Petunia axillaris HOM05D007134 ORTHO05D009004 3.0e-116 422.5 298 65.1
Hma1.2p1_0991F.1_g244990 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 6.7e-116 421.4 298 65.4
Hma1.2p1_2785F.1_g328490 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 8.7e-116 421.0 298 65.1
Sabra01G0112400 Salix brachista HOM05D007134 ORTHO05D009004 5.7e-115 418.3 326 61.7
Ciclev10032247m.g Citrus clementina HOM05D007134 ORTHO05D009004 3.7e-114 415.6 295 66.8
CANSAT21G0276 Cannabis sativa HOM05D007134 ORTHO05D009004 8.2e-114 414.5 298 66.1
ClCG10G001760 Citrullus lanatus HOM05D007134 ORTHO05D009004 1.1e-113 414.1 318 61.9
MELO3C013860.2 Cucumis melo HOM05D007134 ORTHO05D009004 1.8e-113 413.3 320 61.2
Prupe.5G039700 Prunus persica HOM05D007134 ORTHO05D009004 2.4e-113 412.9 309 64.1
Solyc08g077090.3 Solanum lycopersicum HOM05D007134 ORTHO05D009004 2.4e-113 412.9 298 64.1
TWI81G0484 Tripterygium wilfordii HOM05D007134 ORTHO05D009004 5.3e-113 411.8 296 65.2
CAN.G1659.3 Capsicum annuum HOM05D007134 ORTHO05D009004 9.0e-113 411.0 298 64.1
FvH4_5g21740 Fragaria vesca HOM05D007134 ORTHO05D009004 5.9e-112 408.3 308 66.2
Nitab4.5_0002931g0030 Nicotiana tabacum HOM05D007134 ORTHO05D009004 7.7e-112 407.9 298 64.4
Sed0020644 Sechium edule HOM05D007134 ORTHO05D009004 2.2e-111 406.4 297 64.3
Sopen08g025670 Solanum pennellii HOM05D007134 ORTHO05D009004 2.2e-111 406.4 297 64.0
CsaV3_3G001860 Cucumis sativus L. HOM05D007134 ORTHO05D009004 2.9e-111 406.0 291 65.3
MD06G1032400 Malus domestica HOM05D007134 ORTHO05D009004 5.0e-111 405.2 309 64.1
Aqoxy3G02427 Aquilegia oxysepala HOM05D007134 ORTHO05D009004 6.5e-111 404.8 308 62.7
FAN08G2031 Fragaria x ananassa HOM05D007134 ORTHO05D009004 8.5e-111 404.4 308 65.6
RcHm_v2.0_Chr7g0209231 Rosa chinensis HOM05D007134 ORTHO05D009004 1.4e-110 403.7 303 64.7
PGR042G2424 Punica granatum HOM05D007134 ORTHO05D009004 2.5e-110 402.9 299 64.2
Sc01g0007540 Simmondsia chinensis HOM05D007134 ORTHO05D009004 9.4e-110 401.0 319 60.5
PSO782G3567 Papaver somniferum HOM05D007134 ORTHO05D009004 1.2e-109 400.6 298 62.4
PGSC0003DMG400017530 Solanum tuberosum HOM05D007134 ORTHO05D009004 6.1e-109 398.3 326 58.9
FAN13G3184 Fragaria x ananassa HOM05D007134 ORTHO05D009004 7.9e-109 397.9 319 63.0
Nitab4.5_0001276g0070 Nicotiana tabacum HOM05D007134 ORTHO05D009004 1.4e-108 397.1 290 65.2
AUR62007266 Chenopodium quinoa HOM05D007134 ORTHO05D009004 2.3e-108 396.4 317 60.3
Ah.12g054890 Amaranthus hybridus HOM05D007134 ORTHO05D009004 5.1e-108 395.2 297 62.6
FAN18G1678 Fragaria x ananassa HOM05D007134 ORTHO05D009004 5.1e-108 395.2 333 61.3
Eucgr.E00292 Eucalyptus grandis HOM05D007134 ORTHO05D009004 6.7e-108 394.8 315 60.6
EL10Ac5g12144 Beta vulgaris HOM05D007134 ORTHO05D009004 2.0e-107 393.3 293 63.5
Cc08_g02480 Coffea canephora HOM05D007134 ORTHO05D009004 3.3e-107 392.5 290 64.8
Aa31LG9G15330 Aethionema arabicum HOM05D007134 ORTHO05D009004 3.7e-106 389.0 296 62.8
THA.LOC104814437 Tarenaya hassleriana HOM05D007134 ORTHO05D009004 4.1e-105 385.6 315 60.0
AL4G31350 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 5.3e-105 385.2 296 61.5
CDE12G0960 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 9.1e-105 384.4 298 63.8
SGA_v2.0_scaffold34G13941 Striga asiatica HOM05D007134 ORTHO05D009004 1.2e-104 384.0 301 61.5
MSTRG.6669 Avicennia marina HOM05D007134 ORTHO05D009004 1.5e-104 383.6 300 61.3
AL457U10010 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 4.5e-104 382.1 296 61.1
AT2G35320 Arabidopsis thaliana HOM05D007134 ORTHO05D009004 4.5e-104 382.1 296 60.1
Carub.0004s1701 Capsella rubella HOM05D007134 ORTHO05D009004 4.5e-104 382.1 293 61.4
Sp4g17520 Schrenkiella parvula HOM05D007134 ORTHO05D009004 2.2e-103 379.8 297 60.6
A03p19520 Brassica napus HOM05D007134 ORTHO05D009004 1.9e-102 376.7 304 58.6
C03p22750 Brassica napus HOM05D007134 ORTHO05D009004 1.9e-102 376.7 304 58.9
BraA03t11205Z Brassica rapa HOM05D007134 ORTHO05D009004 1.9e-102 376.7 304 58.6
Thhalv10016981m.g Eutrema salsugineum HOM05D007134 ORTHO05D009004 2.5e-102 376.3 295 61.0
ECA233G0754 Erigeron canadensis HOM05D007134 ORTHO05D009004 3.2e-102 375.9 294 60.5
Rhsim11G0013400 Rhododendron simsii HOM05D007134 ORTHO05D009004 5.5e-102 375.2 419 48.0
BolC3t14673H Brassica oleracea HOM05D007134 ORTHO05D009004 1.6e-101 373.6 297 59.3
CARHR129460 Cardamine hirsuta HOM05D007134 ORTHO05D009004 2.1e-101 373.2 295 59.3
Oeu036071.3 Olea europaea HOM05D007134 ORTHO05D009004 2.1e-101 373.2 332 56.3
CDE04G0512 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 3.6e-101 372.5 301 62.5
Gohir.A12G209200 Gossypium hirsutum HOM05D007134 ORTHO05D009004 4.7e-101 372.1 263 69.6
ATR0049G037 Amborella trichopoda HOM05D007134 ORTHO05D009004 6.1e-101 371.7 310 59.7
SalBow7G1996 Salvia bowleyana HOM05D007134 ORTHO05D009004 1.8e-100 370.2 304 58.2
DCAR_032214 Daucus carota HOM05D007134 ORTHO05D009004 2.3e-100 369.8 300 58.3
Medtr4g098510 Medicago truncatula HOM05D007134 ORTHO05D009004 7.4e-99 364.8 245 73.1
SalBow7G3039 Salvia bowleyana HOM05D007134 ORTHO05D009004 1.7e-98 363.6 298 58.4
Lsat_1_v5_gn_6_64760 Lactuca sativa HOM05D007134 ORTHO05D009004 1.4e-97 360.5 297 57.6
Hund11255 Selenicereus undatus HOM05D007134 ORTHO05D009004 1.8e-97 360.1 341 52.8
Os06g0110100 Oryza sativa ssp. japonica HOM05D007134 ORTHO05D009004 2.0e-96 356.7 295 57.3
Migut.M00165 Erythranthe guttata HOM05D007134 ORTHO05D009004 1.3e-95 354.0 289 59.2
HanXRQChr06g0178411 Helianthus annuus HOM05D007134 ORTHO05D009004 2.2e-95 353.2 301 56.1
vmacro00339 Vaccinium macrocarpon HOM05D007134 ORTHO05D009004 9.4e-94 347.8 437 44.6
Zm00001eb417090 Zea mays HOM05D007134 ORTHO05D009004 3.6e-93 345.9 291 57.0
unitig_749.g14086 Utricularia gibba HOM05D007134 ORTHO05D009004 1.1e-91 340.9 295 56.9
Nn6g33621 Nelumbo nucifera HOM05D007134 ORTHO05D009004 1.7e-90 337.0 298 55.4
AUR62018733 Chenopodium quinoa HOM05D007134 ORTHO05D009004 2.1e-85 320.1 317 51.1
FAN04G0135 Fragaria x ananassa HOM05D007134 ORTHO05D009004 2.6e-83 313.2 308 52.9
BcaC01g05731 Brassica carinata HOM05D007134 ORTHO05D009004 5.7e-83 312.0 297 52.2
PSO063G6706 Papaver somniferum HOM05D007134 ORTHO05D009004 4.1e-81 305.8 298 50.7
VMungo0251G0669 Vigna mungo HOM05D007134 ORTHO05D009004 2.5e-78 296.6 180 76.7
AagrBONN_evm.TU.Sc2ySwM_117.2263 Anthoceros agrestis HOM05D007134 ORTHO05D009004 3.1e-73 279.6 303 46.9
Pp3c2_15970 Physcomitrium patens HOM05D007134 ORTHO05D009004 2.0e-72 276.9 295 45.8
Pp3c1_31250 Physcomitrium patens HOM05D007134 ORTHO05D009004 4.4e-67 259.2 302 43.7
Pp3c2_10940 Physcomitrium patens HOM05D007134 ORTHO05D009004 3.2e-57 226.5 304 40.8
VMungo0251G0585 Vigna mungo HOM05D007134 ORTHO05D009004 7.0e-57 225.3 140 77.9
QL12p006104 Quercus lobata HOM05D007134 ORTHO05D009004 6.6e-55 218.8 149 67.1
Pp3c17_17110 Physcomitrium patens HOM05D007134 ORTHO05D009004 1.4e-49 201.1 258 40.3
SEGI_12545 Sequoiadendron giganteum HOM05D007134 ORTHO05D009004 5.8e-35 152.5 149 53.0
Cpa.g.sc71.65 Carica papaya HOM05D007134 ORTHO05D009004 7.8e-32 142.1 85 67.1
Nn6g33134 Nelumbo nucifera HOM05D007134 ORTHO05D009004 1.5e-11 74.7 64 59.4
Cre09.g398150 Chlamydomonas reinhardtii HOM05D007134 ORTHO05D009004 1.9e-06 57.8 343 21.0


User provided reference genes

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