Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.2X3TQS Arachis hypogaea HOM05D001925 ORTHO05D004257 2.4e-167 592.0 289 100.0
arahy.Tifrunner.gnm1.ann1.E5DFEG Arachis hypogaea HOM05D001925 ORTHO05D004257 1.1e-108 397.1 316 68.7
arahy.Tifrunner.gnm1.ann1.IGP217 Arachis hypogaea HOM05D001925 ORTHO05D004257 1.5e-108 396.7 316 68.7
Glyma.18G234100 Glycine max HOM05D001925 ORTHO05D004257 3.0e-101 372.5 317 64.0
Glyma.09G258600 Glycine max HOM05D001925 ORTHO05D004257 5.6e-100 368.2 317 63.7
Phvul.008G061700 Phaseolus vulgaris HOM05D001925 ORTHO05D004257 1.1e-95 354.0 317 61.5
VMungo1383G2450 Vigna mungo HOM05D001925 ORTHO05D004257 4.2e-95 352.1 317 61.2
Ca_07929_v3 Cicer arietinum L. HOM05D001925 ORTHO05D004257 2.8e-91 339.3 315 59.0
TPR.G37799 Trifolium pratense HOM05D001925 ORTHO05D004257 2.8e-91 339.3 315 58.4
Lj1g0025308 Lotus japonicus HOM05D001925 ORTHO05D004257 5.3e-90 335.1 319 59.2
Lalb_Chr23g0275821 Lupinus albus HOM05D001925 ORTHO05D004257 7.7e-89 331.3 316 57.9
Medtr7g077860 Medicago truncatula HOM05D001925 ORTHO05D004257 1.4e-85 320.5 317 56.8
Psat3g108000 Pisum sativum HOM05D001925 ORTHO05D004257 1.9e-79 300.1 276 59.8
Haze_15511 Corylus avellana HOM05D001925 ORTHO05D005701 1.8e-69 266.9 314 50.3
Atru.chr5.510 Acer truncatum HOM05D001925 ORTHO05D004257 2.9e-64 249.6 322 46.3
CiPaw.02G032000 Carya illinoinensis HOM05D001925 ORTHO05D004257 5.0e-64 248.8 285 50.5
Prupe.2G172100 Prunus persica HOM05D001925 ORTHO05D004257 1.1e-63 247.7 319 48.3
CANSAT21G1319 Cannabis sativa HOM05D001925 ORTHO05D004257 1.9e-63 246.9 319 49.5
Ciclev10021244m.g Citrus clementina HOM05D001925 ORTHO05D004257 1.9e-63 246.9 322 48.1
Dinv32493 Davidia involucrata HOM05D001925 ORTHO05D004257 3.2e-63 246.1 318 44.7
Thecc.01G357700 Theobroma cacao HOM05D001925 ORTHO05D004257 3.2e-63 246.1 312 46.5
Gorai.007G100500 Gossypium raimondii HOM05D001925 ORTHO05D004257 2.1e-62 243.4 320 45.3
Gohir.A11G089800 Gossypium hirsutum HOM05D001925 ORTHO05D004257 6.1e-62 241.9 320 45.0
TAR375G1105 Trochodendron aralioides HOM05D001925 ORTHO05D004257 6.1e-62 241.9 318 45.6
Cfa003907 Carpinus fangiana HOM05D001925 ORTHO05D005701 8.0e-62 241.5 284 49.6
COL.COLO4_12725 Corchorus olitorius HOM05D001925 ORTHO05D005701 1.4e-61 240.7 308 46.4
Gohir.D11G094100 Gossypium hirsutum HOM05D001925 ORTHO05D004257 4.0e-61 239.2 320 44.7
Duzib133G0433 Durio zibethinus HOM05D001925 ORTHO05D004257 6.8e-61 238.4 320 44.7
CSS0032978 Camellia sinensis var. sinensis HOM05D001925 ORTHO05D004257 2.0e-60 236.9 320 44.1
TWI23G0808 Tripterygium wilfordii HOM05D001925 ORTHO05D004257 7.5e-60 235.0 319 45.1
QL04p053608 Quercus lobata HOM05D001925 ORTHO05D004257 8.3e-59 231.5 278 48.2
TAR629G3070 Trochodendron aralioides HOM05D001925 ORTHO05D004257 8.3e-59 231.5 320 44.1
Duzib138G1880 Durio zibethinus HOM05D001925 ORTHO05D004257 1.4e-58 230.7 319 43.6
Nn1g01562 Nelumbo nucifera HOM05D001925 ORTHO05D004257 7.0e-58 228.4 319 43.9
Actinidia02837 Actinidia chinensis HOM05D001925 ORTHO05D004257 2.7e-57 226.5 319 44.5
RcHm_v2.0_Chr1g0355951 Rosa chinensis HOM05D001925 ORTHO05D004257 4.5e-57 225.7 322 45.0
Sabra14G0062300 Salix brachista HOM05D001925 ORTHO05D004257 4.5e-57 225.7 319 45.5
FAN10G2559 Fragaria x ananassa HOM05D001925 ORTHO05D004257 7.7e-57 224.9 318 43.7
Nn6g33385 Nelumbo nucifera HOM05D001925 ORTHO05D004257 7.7e-57 224.9 319 43.9
TAR374G1741 Trochodendron aralioides HOM05D001925 ORTHO05D004257 1.7e-56 223.8 319 42.0
FvH4_7g14520 Fragaria vesca HOM05D001925 ORTHO05D004257 2.2e-56 223.4 318 43.1
Manes.05G033200 Manihot esculenta HOM05D001925 ORTHO05D004257 2.2e-56 223.4 320 44.4
FAN10G1179 Fragaria x ananassa HOM05D001925 ORTHO05D004257 3.8e-56 222.6 318 43.4
Potri.014G086000 Populus trichocarpa HOM05D001925 ORTHO05D004257 3.8e-56 222.6 312 45.2
FAN06G4809 Fragaria x ananassa HOM05D001925 ORTHO05D004257 5.0e-56 222.2 318 42.8
FAN01G0375 Fragaria x ananassa HOM05D001925 ORTHO05D005701 6.5e-56 221.9 319 43.3
FAN06G3089 Fragaria x ananassa HOM05D001925 ORTHO05D004257 1.1e-55 221.1 318 42.8
CiPaw.01G062900 Carya illinoinensis HOM05D001925 ORTHO05D004257 4.2e-55 219.2 321 43.0
Manes.01G255700 Manihot esculenta HOM05D001925 ORTHO05D004257 4.2e-55 219.2 318 43.7
Cc02_g38170 Coffea canephora HOM05D001925 ORTHO05D004257 7.2e-55 218.4 318 42.8
Hma1.2p1_0780F.1_g216780 Hydrangea macrophylla HOM05D001925 ORTHO05D004257 7.2e-55 218.4 339 41.3
Medtr2g027720 Medicago truncatula HOM05D001925 ORTHO05D004257 2.7e-54 216.5 233 54.5
FAN03G0610 Fragaria x ananassa HOM05D001925 ORTHO05D004257 4.7e-54 215.7 315 42.5
Sabra02G0127500 Salix brachista HOM05D001925 ORTHO05D004257 8.0e-54 214.9 305 45.2
vmacro20933 Vaccinium macrocarpon HOM05D001925 ORTHO05D004257 3.0e-53 213.0 322 42.2
Migut.M00740 Erythranthe guttata HOM05D001925 ORTHO05D004257 4.0e-53 212.6 318 43.1
Potri.002G160700 Populus trichocarpa HOM05D001925 ORTHO05D004257 8.8e-53 211.5 309 44.3
SalBow8G4919 Salvia bowleyana HOM05D001925 ORTHO05D004257 8.8e-53 211.5 317 41.3
MBI18_g02843_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D004257 2.0e-52 210.3 322 41.9
Hma1.2p1_0780F.1_g216750 Hydrangea macrophylla HOM05D001925 ORTHO05D004257 4.4e-52 209.1 340 39.1
Nitab4.5_0008206g0010 Nicotiana tabacum HOM05D001925 ORTHO05D004257 7.5e-52 208.4 313 42.2
Eucgr.D02304 Eucalyptus grandis HOM05D001925 ORTHO05D004257 9.8e-52 208.0 319 43.3
Lj9A584T67 Lonicera japonica HOM05D001925 ORTHO05D004257 1.1e-50 204.5 284 44.0
TWI59G0730 Tripterygium wilfordii HOM05D001925 ORTHO05D004257 2.4e-50 203.4 274 43.1
ClCG05G001470 Citrullus lanatus HOM05D001925 ORTHO05D004257 3.1e-50 203.0 309 43.7
PGR042G2528 Punica granatum HOM05D001925 ORTHO05D004257 4.1e-50 202.6 324 39.8
PGR031G2850 Punica granatum HOM05D001925 ORTHO05D004257 5.4e-50 202.2 318 41.8
Peaxi162Scf00020g00730 Petunia axillaris HOM05D001925 ORTHO05D004257 7.0e-50 201.8 314 40.4
PGSC0003DMG400000175 Solanum tuberosum HOM05D001925 ORTHO05D004257 9.1e-50 201.4 314 41.1
Ah.05g180510 Amaranthus hybridus HOM05D001925 ORTHO05D004257 5.9e-49 198.7 334 41.0
MSTRG.14225 Avicennia marina HOM05D001925 ORTHO05D004257 5.9e-49 198.7 312 41.7
MD01G1065100 Malus domestica HOM05D001925 ORTHO05D004257 1.3e-48 197.6 333 41.1
CsaV3_3G008850 Cucumis sativus L. HOM05D001925 ORTHO05D004257 1.7e-48 197.2 309 42.4
Cpa.g.sc11.19 Carica papaya HOM05D001925 ORTHO05D004257 6.6e-48 195.3 318 42.8
Nitab4.5_0000583g0190 Nicotiana tabacum HOM05D001925 ORTHO05D004257 6.6e-48 195.3 303 41.3
Nitab4.5_0000386g0060 Nicotiana tabacum HOM05D001925 ORTHO05D004257 8.6e-48 194.9 304 41.4
Sed0006621 Sechium edule HOM05D001925 ORTHO05D004257 8.6e-48 194.9 309 43.0
MELO3C006104.2 Cucumis melo HOM05D001925 ORTHO05D004257 1.5e-47 194.1 309 41.7
Actinidia10041 Actinidia chinensis HOM05D001925 ORTHO05D004257 1.2e-46 191.0 286 43.7
Lalb_Chr11g0072911 Lupinus albus HOM05D001925 ORTHO05D004257 2.1e-46 190.3 302 42.4
MD07G1135300 Malus domestica HOM05D001925 ORTHO05D004257 2.8e-46 189.9 328 40.5
Rhsim07G0013800 Rhododendron simsii HOM05D001925 ORTHO05D004257 8.0e-46 188.3 303 39.9
PSO782G1204 Papaver somniferum HOM05D001925 ORTHO05D004257 1.0e-45 188.0 302 39.7
Nitab4.5_0006018g0030 Nicotiana tabacum HOM05D001925 ORTHO05D004257 1.8e-45 187.2 305 40.0
Oeu031215.1 Olea europaea HOM05D001925 ORTHO05D004257 4.0e-45 186.0 318 38.4
GSVIVG01026948001 Vitis vinifera HOM05D001925 ORTHO05D004257 8.9e-45 184.9 304 40.5
PSO478G2649 Papaver somniferum HOM05D001925 ORTHO05D004257 1.2e-44 184.5 301 39.5
Sopen10g006250 Solanum pennellii HOM05D001925 ORTHO05D004257 1.2e-44 184.5 312 39.1
CAN.G78.91 Capsicum annuum HOM05D001925 ORTHO05D004257 5.7e-44 182.2 313 37.7
AUR62022581 Chenopodium quinoa HOM05D001925 ORTHO05D004257 9.8e-44 181.4 258 43.8
Solyc10g012420.3 Solanum lycopersicum HOM05D001925 ORTHO05D004257 1.7e-43 180.6 312 38.5
Sopen01g038550 Solanum pennellii HOM05D001925 ORTHO05D004257 1.7e-43 180.6 306 39.9
Peaxi162Scf00008g02423 Petunia axillaris HOM05D001925 ORTHO05D004257 4.1e-42 176.0 313 37.7
Sed0020685 Sechium edule HOM05D001925 ORTHO05D004257 2.7e-41 173.3 308 40.3
Aqoxy7G00278 Aquilegia oxysepala HOM05D001925 ORTHO05D004257 1.0e-40 171.4 309 38.2
THA.LOC104825845 Tarenaya hassleriana HOM05D001925 ORTHO05D004257 1.7e-40 170.6 319 37.0
Thhalv10029186m.g Eutrema salsugineum HOM05D001925 ORTHO05D004257 2.3e-40 170.2 324 38.0
AUR62004372 Chenopodium quinoa HOM05D001925 ORTHO05D004257 2.9e-40 169.9 257 43.2
PGSC0003DMG400006504 Solanum tuberosum HOM05D001925 ORTHO05D004257 2.9e-40 169.9 273 39.9
Oeu005388.3 Olea europaea HOM05D001925 ORTHO05D004257 6.6e-40 168.7 311 38.3
Aa31LG5G590 Aethionema arabicum HOM05D001925 ORTHO05D004257 1.1e-39 167.9 322 38.2
CAN.G116.9 Capsicum annuum HOM05D001925 ORTHO05D004257 1.5e-39 167.5 313 37.7
Eucgr.E00120 Eucalyptus grandis HOM05D001925 ORTHO05D004257 2.1e-38 163.7 282 39.4
Sp6g00430 Schrenkiella parvula HOM05D001925 ORTHO05D004257 2.1e-38 163.7 315 38.4
EL10Ac1g00401 Beta vulgaris HOM05D001925 ORTHO05D004257 1.4e-37 161.0 304 37.2
DCAR_007445 Daucus carota HOM05D001925 ORTHO05D004257 1.8e-37 160.6 278 38.5
Hund27265 Selenicereus undatus HOM05D001925 ORTHO05D004257 1.2e-36 157.9 337 34.7
Sc26g0000880 Simmondsia chinensis HOM05D001925 ORTHO05D004257 1.2e-36 157.9 303 36.0
Actinidia20895 Actinidia chinensis HOM05D001925 ORTHO05D005701 4.4e-36 156.0 228 44.3
Oeu061351.3 Olea europaea HOM05D001925 ORTHO05D004257 9.8e-36 154.8 265 36.2
unitig_749.g13536 Utricularia gibba HOM05D001925 ORTHO05D004257 1.7e-35 154.1 321 36.4
THA.LOC104817027 Tarenaya hassleriana HOM05D001925 ORTHO05D004257 2.9e-35 153.3 281 37.0
TAR636G0324 Trochodendron aralioides HOM05D001925 ORTHO05D004257 1.4e-34 151.0 298 36.9
DCAR_025195 Daucus carota HOM05D001925 ORTHO05D004257 2.4e-34 150.2 305 33.8
Dinv43827 Davidia involucrata HOM05D001925 ORTHO05D005701 2.4e-34 150.2 292 36.0
PSO017G3573 Papaver somniferum HOM05D001925 ORTHO05D004257 4.1e-34 149.4 307 36.5
AL6G53090 Arabidopsis lyrata HOM05D001925 ORTHO05D004257 9.2e-34 148.3 309 36.2
Rhsim01G0159000 Rhododendron simsii HOM05D001925 ORTHO05D004257 1.2e-33 147.9 287 39.7
AL4G45210 Arabidopsis lyrata HOM05D001925 ORTHO05D004257 7.8e-33 145.2 305 37.4
ATR0680G064 Amborella trichopoda HOM05D001925 ORTHO05D004257 1.0e-32 144.8 312 36.9
ECA236G3632 Erigeron canadensis HOM05D001925 ORTHO05D004257 1.3e-32 144.4 299 35.5
PSO063G1799 Papaver somniferum HOM05D001925 ORTHO05D004257 1.7e-32 144.1 307 36.2
Aa31LG1G27390 Aethionema arabicum HOM05D001925 ORTHO05D004257 1.5e-31 141.0 301 34.6
Carub.0006s3688 Capsella rubella HOM05D001925 ORTHO05D004257 1.9e-31 140.6 310 36.1
CARHR248450 Cardamine hirsuta HOM05D001925 ORTHO05D004257 2.5e-31 140.2 308 36.4
THA.LOC104817300 Tarenaya hassleriana HOM05D001925 ORTHO05D004257 5.6e-31 139.0 300 34.0
Thhalv10001583m.g Eutrema salsugineum HOM05D001925 ORTHO05D004257 7.3e-31 138.7 309 36.9
Carub.0004s2868 Capsella rubella HOM05D001925 ORTHO05D004257 2.1e-30 137.1 305 35.4
SalBow3G4075 Salvia bowleyana HOM05D001925 ORTHO05D004257 2.8e-30 136.7 302 32.5
Sc23g0002810 Simmondsia chinensis HOM05D001925 ORTHO05D004257 8.0e-30 135.2 269 39.4
Sp4g28050 Schrenkiella parvula HOM05D001925 ORTHO05D004257 1.4e-29 134.4 307 34.5
AT2G45980 Arabidopsis thaliana HOM05D001925 ORTHO05D004257 1.8e-29 134.0 300 36.7
A05p05970 Brassica napus HOM05D001925 ORTHO05D004257 5.2e-29 132.5 298 35.2
HanXRQChr13g0426611 Helianthus annuus HOM05D001925 ORTHO05D004257 8.9e-29 131.7 254 35.8
BraA05t19560Z Brassica rapa HOM05D001925 ORTHO05D004257 1.2e-28 131.3 298 34.9
CARHR141250 Cardamine hirsuta HOM05D001925 ORTHO05D004257 7.5e-28 128.6 307 33.2
THA.LOC104802035 Tarenaya hassleriana HOM05D001925 ORTHO05D004257 1.7e-27 127.5 307 33.6
C04p06900 Brassica napus HOM05D001925 ORTHO05D004257 1.4e-26 124.4 306 33.3
BolC4t22311H Brassica oleracea HOM05D001925 ORTHO05D004257 1.4e-26 124.4 306 33.3
AT4G00355 Arabidopsis thaliana HOM05D001925 ORTHO05D004257 3.2e-26 123.2 304 34.9
HPP92_025783 Vanilla planifolia HOM05D001925 ORTHO05D004257 6.0e-25 119.0 305 30.2
Lsat_1_v5_gn_7_4301 Lactuca sativa HOM05D001925 ORTHO05D004257 8.6e-24 115.2 310 29.7
unitig_8.g3798 Utricularia gibba HOM05D001925 ORTHO05D004257 3.6e-22 109.8 268 33.2
A04p34180 Brassica napus HOM05D001925 ORTHO05D004257 1.4e-21 107.8 303 32.0
BraA04t18879Z Brassica rapa HOM05D001925 ORTHO05D004257 1.4e-21 107.8 303 32.0
Migut.B01767 Erythranthe guttata HOM05D001925 ORTHO05D004257 1.4e-21 107.8 310 31.3
SGA_v2.0_scaffold55G19707 Striga asiatica HOM05D001925 ORTHO05D004257 1.4e-21 107.8 251 33.1
BcaB01g02169 Brassica carinata HOM05D001925 ORTHO05D004257 6.8e-21 105.5 315 29.8
BcaC01g06884 Brassica carinata HOM05D001925 ORTHO05D004257 8.9e-21 105.1 313 29.4
C04p71970 Brassica napus HOM05D001925 ORTHO05D004257 2.6e-20 103.6 298 32.2
Lj6A572T61 Lonicera japonica HOM05D001925 ORTHO05D004257 1.7e-19 100.9 225 29.8
HPP92_014720 Vanilla planifolia HOM05D001925 ORTHO05D004257 2.2e-19 100.5 307 28.7
BolC3t16197H Brassica oleracea HOM05D001925 ORTHO05D004257 3.7e-19 99.8 314 29.9
CDE08G0634 Ceratophyllum demersum HOM05D001925 ORTHO05D004257 3.7e-19 99.8 323 25.4
C03p39260 Brassica napus HOM05D001925 ORTHO05D004257 4.9e-19 99.4 315 30.5
MBI17_g42624_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D004257 1.1e-18 98.2 189 34.4
Os02g0821900 Oryza sativa ssp. japonica HOM05D001925 ORTHO05D004257 3.2e-18 96.7 300 27.0
A03p32220 Brassica napus HOM05D001925 ORTHO05D004257 2.7e-17 93.6 322 29.2
BraA03t12392Z Brassica rapa HOM05D001925 ORTHO05D004257 2.7e-17 93.6 322 29.2
CDE05G2831 Ceratophyllum demersum HOM05D001925 ORTHO05D004257 3.5e-17 93.2 267 29.6
Os04g0165300 Oryza sativa ssp. japonica HOM05D001925 ORTHO05D004257 1.3e-16 91.3 284 28.2
Zm00001eb103050 Zea mays HOM05D001925 ORTHO05D004257 7.3e-15 85.5 160 38.8
SGA_v2.0_scaffold4G02300 Striga asiatica HOM05D001925 ORTHO05D004257 9.6e-15 85.1 259 28.2
BolC4t28695H Brassica oleracea HOM05D001925 ORTHO05D004257 2.1e-14 84.0 301 29.2
Zm00001eb318800 Zea mays HOM05D001925 ORTHO05D004257 8.1e-14 82.0 90 53.3
HanXRQChr04g0121161 Helianthus annuus HOM05D001925 ORTHO05D004257 1.1e-13 81.6 253 29.2
Zm00001eb191080 Zea mays HOM05D001925 ORTHO05D004257 2.4e-13 80.5 306 25.8
SEGI_07880 Sequoiadendron giganteum HOM05D001925 ORTHO05D004257 4.6e-09 66.2 137 33.6
Zm00001eb305930 Zea mays HOM05D001925 ORTHO05D004257 6.0e-09 65.9 298 25.8
SGA_v2.0_scaffold95G28831 Striga asiatica HOM05D001925 ORTHO05D004257 2.3e-08 63.9 254 27.2
Oeu051126.2 Olea europaea HOM05D001925 ORTHO05D004257 1.3e-06 58.2 146 35.6
A05p05940 Brassica napus HOM05D001925 ORTHO05D004257 3.6e-06 56.6 63 47.6
BraA05t19557Z Brassica rapa HOM05D001925 ORTHO05D004257 3.6e-06 56.6 63 47.6
Os07g0418200 Oryza sativa ssp. japonica HOM05D001925 ORTHO05D004257 4.8e-06 56.2 300 23.7


User provided reference genes

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