Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.2S9CTF Arachis hypogaea HOM05D007670 ORTHO05D009646 0.0e+00 1137.1 597 100.0
arahy.Tifrunner.gnm1.ann1.4HF9FM Arachis hypogaea HOM05D007670 ORTHO05D009646 0.0e+00 1105.5 597 97.8
Glyma.05G042100 Glycine max HOM05D007670 ORTHO05D009646 4.2e-206 721.8 619 67.5
VMungo1215G0346 Vigna mungo HOM05D007670 ORTHO05D009646 5.4e-198 694.9 617 65.5
Psat4g061560 Pisum sativum HOM05D007670 ORTHO05D009646 1.9e-190 669.8 634 63.2
Medtr4g104750 Medicago truncatula HOM05D007670 ORTHO05D009646 3.2e-190 669.1 636 62.6
Lj4g0014046 Lotus japonicus HOM05D007670 ORTHO05D009646 1.2e-189 667.2 628 63.1
Ca_19420_v3 Cicer arietinum L. HOM05D007670 ORTHO05D009646 2.1e-189 666.4 626 63.7
Phvul.003G205800 Phaseolus vulgaris HOM05D007670 ORTHO05D009646 2.8e-186 656.0 616 63.8
TPR.G37476 Trifolium pratense HOM05D007670 ORTHO05D009646 2.2e-183 646.4 662 60.6
Thecc.03G116000 Theobroma cacao HOM05D007670 ORTHO05D009646 7.7e-144 515.0 642 52.2
TWI39G0169 Tripterygium wilfordii HOM05D007670 ORTHO05D009646 2.5e-142 510.0 653 50.4
TWI23G1319 Tripterygium wilfordii HOM05D007670 ORTHO05D009646 1.1e-134 484.6 656 49.7
Gohir.A03G074800 Gossypium hirsutum HOM05D007670 ORTHO05D009646 1.6e-133 480.7 648 50.2
Potri.015G084300 Populus trichocarpa HOM05D007670 ORTHO05D009646 2.6e-131 473.4 609 49.9
Sopen03g031210 Solanum pennellii HOM05D007670 ORTHO05D009646 4.4e-131 472.6 653 48.7
PGSC0003DMG400018192 Solanum tuberosum HOM05D007670 ORTHO05D009646 9.8e-131 471.5 651 48.5
COL.COLO4_33501 Corchorus olitorius HOM05D007670 ORTHO05D009646 2.2e-130 470.3 661 49.2
FAN18G1020 Fragaria x ananassa HOM05D007670 ORTHO05D009646 3.7e-130 469.5 643 48.1
Prupe.5G164600 Prunus persica HOM05D007670 ORTHO05D009646 3.7e-130 469.5 560 52.7
Cc04_g11380 Coffea canephora HOM05D007670 ORTHO05D009646 6.3e-130 468.8 662 47.1
Ciclev10024352m.g Citrus clementina HOM05D007670 ORTHO05D009646 8.3e-130 468.4 654 47.9
PGR044G2723 Punica granatum HOM05D007670 ORTHO05D009646 1.8e-129 467.2 656 49.5
Cfa019228 Carpinus fangiana HOM05D007670 ORTHO05D009646 2.4e-129 466.8 633 49.8
Actinidia08035 Actinidia chinensis HOM05D007670 ORTHO05D009646 7.0e-129 465.3 620 48.9
Nitab4.5_0008913g0020 Nicotiana tabacum HOM05D007670 ORTHO05D009646 1.6e-128 464.2 664 48.9
FvH4_5g06391 Fragaria vesca HOM05D007670 ORTHO05D009646 1.5e-126 457.6 643 47.6
CANSAT80G0945 Cannabis sativa HOM05D007670 ORTHO05D009646 4.3e-126 456.1 638 48.0
FAN08G1903 Fragaria x ananassa HOM05D007670 ORTHO05D009646 9.5e-126 454.9 645 48.4
FAN04G2873 Fragaria x ananassa HOM05D007670 ORTHO05D009646 2.8e-125 453.4 644 47.7
Nitab4.5_0002522g0060 Nicotiana tabacum HOM05D007670 ORTHO05D009646 2.8e-125 453.4 660 48.6
FAN13G0035 Fragaria x ananassa HOM05D007670 ORTHO05D009646 1.0e-124 451.4 643 47.0
Manes.06G111300 Manihot esculenta HOM05D007670 ORTHO05D009646 1.5e-123 447.6 527 53.1
MD14G1170500 Malus domestica HOM05D007670 ORTHO05D009646 6.4e-122 442.2 567 50.4
Atru.chr9.2593 Acer truncatum HOM05D007670 ORTHO05D009646 8.3e-122 441.8 642 47.7
RcHm_v2.0_Chr7g0192411 Rosa chinensis HOM05D007670 ORTHO05D009646 6.6e-119 432.2 550 50.9
Gorai.003G106900 Gossypium raimondii HOM05D007670 ORTHO05D009646 8.6e-119 431.8 550 51.1
Glyma.17G124800 Glycine max HOM05D007670 ORTHO05D009646 1.1e-118 431.4 405 62.7
SalBow5G0325 Salvia bowleyana HOM05D007670 ORTHO05D009646 2.5e-118 430.3 678 44.5
SalBow5G5044 Salvia bowleyana HOM05D007670 ORTHO05D009646 2.1e-117 427.2 678 44.4
ClCG03G003050 Citrullus lanatus HOM05D007670 ORTHO05D009646 2.3e-116 423.7 593 47.0
Gohir.D03G101500 Gossypium hirsutum HOM05D007670 ORTHO05D009646 1.5e-115 421.0 550 50.5
Aqoxy3G01244 Aquilegia oxysepala HOM05D007670 ORTHO05D009646 3.7e-114 416.4 667 45.1
DCAR_007451 Daucus carota HOM05D007670 ORTHO05D009646 2.1e-112 410.6 638 43.9
Migut.O00167 Erythranthe guttata HOM05D007670 ORTHO05D009646 1.0e-111 408.3 543 48.1
Sed0003800 Sechium edule HOM05D007670 ORTHO05D009646 1.0e-111 408.3 596 44.6
ECA246G3610 Erigeron canadensis HOM05D007670 ORTHO05D009646 1.8e-108 397.5 710 40.6
Lsat_1_v5_gn_5_13921 Lactuca sativa HOM05D007670 ORTHO05D009646 2.0e-107 394.0 609 44.5
PSO478G3950 Papaver somniferum HOM05D007670 ORTHO05D009646 1.9e-105 387.5 645 43.3
ATR0824G010 Amborella trichopoda HOM05D007670 ORTHO05D009646 2.4e-105 387.1 601 45.4
Lj5C130G15 Lonicera japonica HOM05D007670 ORTHO05D009646 8.9e-100 368.6 602 43.0
GSVIVG01007632001 Vitis vinifera HOM05D007670 ORTHO05D009646 4.6e-96 356.3 435 51.5
Eucgr.K02784 Eucalyptus grandis HOM05D007670 ORTHO05D009646 1.5e-91 341.3 425 49.6
CiPaw.12G031800 Carya illinoinensis HOM05D007670 ORTHO05D009646 2.4e-89 334.0 596 42.6
Hma1.2p1_1092F.1_g255930 Hydrangea macrophylla HOM05D007670 ORTHO05D009646 4.3e-86 323.2 430 47.4
TAR629G1516 Trochodendron aralioides HOM05D007670 ORTHO05D009646 1.8e-84 317.8 303 60.7
HanXRQChr05g0156201 Helianthus annuus HOM05D007670 ORTHO05D009646 2.7e-80 303.9 532 41.7
Glyma.17G124700 Glycine max HOM05D007670 ORTHO05D009646 4.3e-78 296.6 241 70.1
Dinv20593 Davidia involucrata HOM05D007670 ORTHO05D009646 3.7e-77 293.5 434 48.4
QL10p006759 Quercus lobata HOM05D007670 ORTHO05D009646 1.1e-76 292.0 467 44.8
HPP92_003438 Vanilla planifolia HOM05D001493 ORTHO05D001681 1.3e-69 268.5 508 39.6
MELO3C002304.2 Cucumis melo HOM05D007670 ORTHO05D009646 3.2e-65 253.8 323 48.9
Solyc03g112120.3 Solanum lycopersicum HOM05D007670 ORTHO05D009646 3.2e-65 253.8 288 55.6
HPP92_001311 Vanilla planifolia HOM05D007670 ORTHO05D009646 7.1e-65 252.7 526 40.5
Peaxi162Scf00089g01230 Petunia axillaris HOM05D007670 ORTHO05D009646 1.3e-63 248.4 292 55.8
Zm00001eb388830 Zea mays HOM05D007670 ORTHO05D009646 3.3e-62 243.8 613 36.4
Cpa.g.sc159.12 Carica papaya HOM05D007670 ORTHO05D009646 3.8e-58 230.3 394 42.4
Solyc03g112110.1 Solanum lycopersicum HOM05D007670 ORTHO05D009646 1.2e-51 208.8 358 41.9
Actinidia24601 Actinidia chinensis HOM05D007670 ORTHO05D009646 2.5e-49 201.1 242 49.2
Peaxi162Scf00089g01229 Petunia axillaris HOM05D007670 ORTHO05D009646 3.0e-47 194.1 371 42.0
SEGI_28887 Sequoiadendron giganteum HOM05D007670 ORTHO05D009646 4.8e-45 186.8 268 43.3
TAR629G0999 Trochodendron aralioides HOM05D007670 ORTHO05D009646 2.8e-37 161.0 224 48.2
arahy.Tifrunner.gnm1.ann1.FDP8U9 Arachis hypogaea HOM05D040116 ORTHO05D009646 3.5e-35 154.1 91 95.6
Os01g0909300 Oryza sativa ssp. japonica HOM05D007670 ORTHO05D009646 2.2e-34 151.4 162 49.4
Zm00001eb393770 Zea mays HOM05D007670 ORTHO05D009646 1.0e-31 142.5 238 41.6
Zm00001eb143920 Zea mays HOM05D007670 ORTHO05D009646 5.2e-31 140.2 401 32.7
Sabra15G0107400 Salix brachista HOM05D007670 ORTHO05D009646 3.2e-25 120.9 437 29.5
Pp3c11_2120 Physcomitrium patens HOM05D007670 ORTHO05D009646 2.7e-24 117.9 303 34.3
SEGI_38678 Sequoiadendron giganteum HOM05D007670 ORTHO05D009646 2.3e-23 114.8 406 32.8
Pp3c10_12340 Physcomitrium patens HOM05D007670 ORTHO05D009646 3.4e-22 110.9 326 30.7
Pp3c26_6480 Physcomitrium patens HOM05D007670 ORTHO05D009646 2.2e-21 108.2 294 32.3
Pp3c26_6484 Physcomitrium patens HOM05D007670 ORTHO05D009646 2.2e-21 108.2 294 32.3
Mapoly0020s0028 Marchantia polymorpha HOM05D007670 ORTHO05D009646 1.1e-17 95.9 266 34.2
Pp3c18_13530 Physcomitrium patens HOM05D007670 ORTHO05D009646 1.9e-17 95.1 332 28.0
QL10p006748 Quercus lobata HOM05D007670 ORTHO05D009646 1.9e-17 95.1 132 45.5
Pp3c21_7410 Physcomitrium patens HOM05D007670 ORTHO05D009646 2.5e-17 94.7 226 31.4
arahy.Tifrunner.gnm1.ann1.M7PE33 Arachis hypogaea HOM05D040116 ORTHO05D009646 4.2e-17 94.0 117 52.1
CsaV3_1G008900 Cucumis sativus L. HOM05D007670 ORTHO05D009646 4.7e-16 90.5 107 50.5
SMO118G0556 Selaginella moellendorffii HOM05D007837 ORTHO05D009965 2.2e-13 81.6 217 31.3
Pp3c7_23860 Physcomitrium patens HOM05D007670 ORTHO05D009646 2.3e-10 71.6 306 25.5
VMungo1127G0844 Vigna mungo HOM05D007837 ORTHO05D009965 5.6e-09 67.0 214 27.1
AagrBONN_evm.TU.Sc2ySwM_228.3840 Anthoceros agrestis HOM05D007837 ORTHO05D009965 7.3e-09 66.6 247 26.3
Gohir.D05G113500 Gossypium hirsutum HOM05D007837 ORTHO05D009965 7.3e-09 66.6 211 27.0
Gorai.009G117500 Gossypium raimondii HOM05D007837 ORTHO05D009965 9.5e-09 66.2 211 27.0
Lj3g0012849 Lotus japonicus HOM05D007837 ORTHO05D009965 1.6e-08 65.5 295 23.4
Gohir.A05G113000 Gossypium hirsutum HOM05D007837 ORTHO05D009965 4.7e-08 63.9 211 27.0
Aqoxy3G00774 Aquilegia oxysepala HOM05D007670 ORTHO05D009646 6.1e-08 63.5 127 36.2
PSO675G4978 Papaver somniferum HOM05D007837 ORTHO05D009965 6.1e-08 63.5 229 25.8
Actinidia36758 Actinidia chinensis HOM05D007670 ORTHO05D009646 8.0e-08 63.2 65 49.2
MELO3C007007.2 Cucumis melo HOM05D007837 ORTHO05D009965 1.0e-07 62.8 239 24.7
Oeu008970.1 Olea europaea HOM05D007837 ORTHO05D009965 1.4e-07 62.4 229 24.0
PSO541G2349 Papaver somniferum HOM05D007837 ORTHO05D009965 1.4e-07 62.4 229 25.8
CsaV3_6G053020 Cucumis sativus L. HOM05D007837 ORTHO05D009965 1.8e-07 62.0 240 24.6
GSVIVG01037969001 Vitis vinifera HOM05D007837 ORTHO05D009965 1.8e-07 62.0 142 31.0
Phvul.011G003300 Phaseolus vulgaris HOM05D007837 ORTHO05D009965 2.3e-07 61.6 213 25.4
Psat7g145400 Pisum sativum HOM05D007837 ORTHO05D009965 2.3e-07 61.6 259 23.9
Peaxi162Scf00195g00413 Petunia axillaris HOM05D007837 ORTHO05D009965 5.2e-07 60.5 230 25.2
TWI15G0587 Tripterygium wilfordii HOM05D007837 ORTHO05D009965 5.2e-07 60.5 255 23.9
Duzib160G0902 Durio zibethinus HOM05D007837 ORTHO05D009965 1.5e-06 58.9 244 25.0
Ciclev10017939m.g Citrus clementina HOM05D007837 ORTHO05D009965 2.0e-06 58.5 248 24.2
MELO3C031542.2 Cucumis melo HOM05D007670 ORTHO05D009646 2.0e-06 58.5 104 44.2
Cpa.g.sc192.12 Carica papaya HOM05D007837 ORTHO05D009965 2.6e-06 58.2 220 25.5
PGR042G0413 Punica granatum HOM05D007837 ORTHO05D009965 2.6e-06 58.2 192 25.0
Atru.chr10.652 Acer truncatum HOM05D007837 ORTHO05D009965 4.4e-06 57.4 233 24.5
ClCG01G025810 Citrullus lanatus HOM05D007837 ORTHO05D009965 4.4e-06 57.4 282 23.4
Glyma.12G002600 Glycine max HOM05D007837 ORTHO05D009965 4.4e-06 57.4 336 23.8
Solyc02g069550.1 Solanum lycopersicum HOM05D007837 ORTHO05D009965 4.4e-06 57.4 213 25.4
Sopen02g018680 Solanum pennellii HOM05D007837 ORTHO05D009965 4.4e-06 57.4 213 25.4
arahy.Tifrunner.gnm1.ann1.FUT705 Arachis hypogaea HOM05D007837 ORTHO05D009965 5.8e-06 57.0 133 25.6
SEGI_16109 Sequoiadendron giganteum HOM05D007837 ORTHO05D009965 5.8e-06 57.0 206 24.3
Aqoxy3G03542 Aquilegia oxysepala HOM05D007837 ORTHO05D009965 7.5e-06 56.6 285 22.1
Thecc.06G015600 Theobroma cacao HOM05D007837 ORTHO05D009965 9.8e-06 56.2 358 25.4


User provided reference genes

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