Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.2QVW8D Arachis hypogaea HOM05D000765 ORTHO05D015967 9.9e-112 406.8 199 100.0
arahy.Tifrunner.gnm1.ann1.A34T7T Arachis hypogaea HOM05D000765 ORTHO05D015967 3.0e-76 288.9 194 76.8
arahy.Tifrunner.gnm1.ann1.7L4C7U Arachis hypogaea HOM05D001318 ORTHO05D015967 2.3e-23 113.2 80 71.2
arahy.Tifrunner.gnm1.ann1.CWF9S7 Arachis hypogaea HOM05D000394 ORTHO05D015967 1.5e-22 110.5 75 76.0
arahy.Tifrunner.gnm1.ann1.B8LUK6 Arachis hypogaea HOM05D005363 ORTHO05D015967 6.8e-20 101.7 77 63.6
arahy.Tifrunner.gnm1.ann1.BLU73S Arachis hypogaea HOM05D001583 ORTHO05D086753 1.3e-18 97.4 71 66.2
arahy.Tifrunner.gnm1.ann1.44037R Arachis hypogaea HOM05D000140 ORTHO05D011837 2.9e-18 96.3 87 59.8
arahy.Tifrunner.gnm1.ann1.VE4HHH Arachis hypogaea HOM05D001065 ORTHO05D002020 1.3e-15 87.4 57 78.9
arahy.Tifrunner.gnm1.ann1.K9DJ4E Arachis hypogaea HOM05D000140 ORTHO05D015967 6.6e-15 85.1 112 50.0
arahy.Tifrunner.gnm1.ann1.Q8WXS4 Arachis hypogaea HOM05D005363 ORTHO05D006607 8.6e-15 84.7 49 87.8
arahy.Tifrunner.gnm1.ann1.3Z4KTG Arachis hypogaea HOM05D001065 ORTHO05D002020 1.5e-14 84.0 57 77.2
arahy.Tifrunner.gnm1.ann1.9SD0MH Arachis hypogaea HOM05D005363 ORTHO05D015967 5.6e-14 82.0 57 75.4
arahy.Tifrunner.gnm1.ann1.A1P1MM Arachis hypogaea HOM05D000140 ORTHO05D000087 9.5e-14 81.3 53 75.5
arahy.Tifrunner.gnm1.ann1.BTU26G Arachis hypogaea HOM05D005363 ORTHO05D015967 8.0e-13 78.2 126 44.4
arahy.Tifrunner.gnm1.ann1.LG4SFI Arachis hypogaea HOM05D000755 ORTHO05D017477 1.4e-12 77.4 52 78.8
arahy.Tifrunner.gnm1.ann1.22WKTX Arachis hypogaea HOM05D000140 ORTHO05D015967 1.2e-11 74.3 113 45.1
arahy.Tifrunner.gnm1.ann1.74QZJ8 Arachis hypogaea HOM05D003351 ORTHO05D003806 1.5e-11 73.9 50 78.0
arahy.Tifrunner.gnm1.ann1.31PRX6 Arachis hypogaea HOM05D000747 ORTHO05D015967 2.0e-11 73.6 114 40.4
arahy.Tifrunner.gnm1.ann1.DN66JW Arachis hypogaea HOM05D000765 ORTHO05D000613 9.8e-11 71.2 38 89.5
Dinv24973 Davidia involucrata HOM05D000765 ORTHO05D000613 9.8e-11 71.2 38 89.5
Cc11_g13300 Coffea canephora HOM05D000765 ORTHO05D000613 1.7e-10 70.5 38 86.8
Lj6C792G1 Lonicera japonica HOM05D000765 ORTHO05D000613 1.7e-10 70.5 38 86.8
CSS0032093 Camellia sinensis var. sinensis HOM05D000765 ORTHO05D000613 2.2e-10 70.1 38 86.8
Migut.L01318 Erythranthe guttata HOM05D000765 ORTHO05D000613 2.2e-10 70.1 38 84.2
Psat4g175520 Pisum sativum HOM05D000765 ORTHO05D000613 2.2e-10 70.1 38 86.8
vmacro16340 Vaccinium macrocarpon HOM05D000765 ORTHO05D000613 2.2e-10 70.1 37 89.2
ECA246G0346 Erigeron canadensis HOM05D000765 ORTHO05D000613 2.9e-10 69.7 38 86.8
HanXRQChr05g0139101 Helianthus annuus HOM05D000765 ORTHO05D000613 2.9e-10 69.7 38 86.8
arahy.Tifrunner.gnm1.ann1.7SL7L9 Arachis hypogaea HOM05D001812 ORTHO05D004247 3.7e-10 69.3 56 64.3
CARHR145290 Cardamine hirsuta HOM05D000765 ORTHO05D000613 3.7e-10 69.3 38 84.2
CiPaw.05G137800 Carya illinoinensis HOM05D000765 ORTHO05D000613 3.7e-10 69.3 38 84.2
COL.COLO4_22975 Corchorus olitorius HOM05D000765 ORTHO05D000613 3.7e-10 69.3 38 84.2
Duzib251G0898 Durio zibethinus HOM05D000765 ORTHO05D000613 3.7e-10 69.3 38 84.2
Glyma.08G298500 Glycine max HOM05D000765 ORTHO05D000613 3.7e-10 69.3 37 89.2
Glyma.18G123400 Glycine max HOM05D000765 ORTHO05D000613 3.7e-10 69.3 37 89.2
Gohir.A03G099300 Gossypium hirsutum HOM05D000765 ORTHO05D000613 3.7e-10 69.3 38 84.2
Gohir.A13G072900 Gossypium hirsutum HOM05D000765 ORTHO05D000613 3.7e-10 69.3 38 84.2
Gohir.D02G124200 Gossypium hirsutum HOM05D000765 ORTHO05D000613 3.7e-10 69.3 38 84.2
Gohir.D12G169300 Gossypium hirsutum HOM05D000765 ORTHO05D000613 3.7e-10 69.3 38 84.2
Gohir.D13G072900 Gossypium hirsutum HOM05D000765 ORTHO05D000613 3.7e-10 69.3 38 84.2
Gorai.005G139700 Gossypium raimondii HOM05D000765 ORTHO05D000613 3.7e-10 69.3 38 84.2
Gorai.008G181900 Gossypium raimondii HOM05D000765 ORTHO05D000613 3.7e-10 69.3 38 84.2
Gorai.013G083700 Gossypium raimondii HOM05D000765 ORTHO05D000613 3.7e-10 69.3 38 84.2
Lj4g0012235 Lotus japonicus HOM05D000765 ORTHO05D000613 3.7e-10 69.3 37 89.2
Phvul.003G067600 Phaseolus vulgaris HOM05D000765 ORTHO05D000613 3.7e-10 69.3 37 89.2
SGA_v2.0_scaffold302G47839 Striga asiatica HOM05D000765 ORTHO05D000613 3.7e-10 69.3 38 84.2
VMungo0251G2823 Vigna mungo HOM05D000765 ORTHO05D000613 3.7e-10 69.3 37 89.2
AL5G12410 Arabidopsis lyrata HOM05D000765 ORTHO05D000613 4.9e-10 68.9 38 84.2
AT2G02860 Arabidopsis thaliana HOM05D000765 ORTHO05D000613 4.9e-10 68.9 38 84.2
MSTRG.686 Avicennia marina HOM05D000765 ORTHO05D000613 4.9e-10 68.9 38 81.6
BcaC06g31211 Brassica carinata HOM05D000765 ORTHO05D000613 4.9e-10 68.9 38 84.2
Cpa.g.sc183.30 Carica papaya HOM05D000765 ORTHO05D000613 4.9e-10 68.9 38 81.6
BcaC03g17173 Brassica carinata HOM05D000765 ORTHO05D000613 6.4e-10 68.6 38 84.2
BcaC06g34032 Brassica carinata HOM05D000765 ORTHO05D000613 6.4e-10 68.6 38 84.2
A02p33150 Brassica napus HOM05D000765 ORTHO05D000613 6.4e-10 68.6 38 84.2
A06p43420 Brassica napus HOM05D000765 ORTHO05D000613 6.4e-10 68.6 38 84.2
C02p50960 Brassica napus HOM05D000765 ORTHO05D000613 6.4e-10 68.6 38 84.2
C07p33530 Brassica napus HOM05D000765 ORTHO05D000613 6.4e-10 68.6 38 84.2
BolC2t11187H Brassica oleracea HOM05D000765 ORTHO05D000613 6.4e-10 68.6 38 84.2
BolC7t43864H Brassica oleracea HOM05D000765 ORTHO05D000613 6.4e-10 68.6 38 84.2
BraA02t08338Z Brassica rapa HOM05D000765 ORTHO05D000613 6.4e-10 68.6 38 84.2
BraA06t27227Z Brassica rapa HOM05D000765 ORTHO05D000613 6.4e-10 68.6 38 84.2
Thhalv10003879m.g Eutrema salsugineum HOM05D000765 ORTHO05D000613 6.4e-10 68.6 38 84.2
FAN22G0484 Fragaria x ananassa HOM05D000765 ORTHO05D000613 6.4e-10 68.6 142 33.1
MD16G1075900 Malus domestica HOM05D000765 ORTHO05D000613 6.4e-10 68.6 38 84.2
Oeu001581.1 Olea europaea HOM05D000765 ORTHO05D000613 6.4e-10 68.6 38 81.6
Prupe.1G271500 Prunus persica HOM05D000765 ORTHO05D000613 6.4e-10 68.6 38 84.2
Sp2g13940 Schrenkiella parvula HOM05D000765 ORTHO05D000613 6.4e-10 68.6 38 84.2
BcaB07g30319 Brassica carinata HOM05D000765 ORTHO05D000613 8.3e-10 68.2 38 81.6
Carub.0005s0175 Capsella rubella HOM05D000765 ORTHO05D000613 8.3e-10 68.2 38 84.2
Ca_24250_v3 Cicer arietinum L. HOM05D000765 ORTHO05D000613 8.3e-10 68.2 37 86.5
Hma1.2p1_0598F.1_g186790 Hydrangea macrophylla HOM05D000765 ORTHO05D000613 8.3e-10 68.2 38 84.2
Lalb_Chr16g0392631 Lupinus albus HOM05D000765 ORTHO05D000613 8.3e-10 68.2 37 86.5
Manes.05G099000 Manihot esculenta HOM05D000765 ORTHO05D000613 8.3e-10 68.2 38 81.6
Nitab4.5_0003062g0010 Nicotiana tabacum HOM05D000765 ORTHO05D000613 8.3e-10 68.2 38 81.6
Nitab4.5_0003586g0020 Nicotiana tabacum HOM05D000765 ORTHO05D000613 8.3e-10 68.2 38 81.6
Rhsim12G0131800 Rhododendron simsii HOM05D000765 ORTHO05D000613 8.3e-10 68.2 37 86.5
Solyc05g007190.4 Solanum lycopersicum HOM05D000765 ORTHO05D000613 8.3e-10 68.2 38 81.6
Sopen05g003150 Solanum pennellii HOM05D000765 ORTHO05D000613 8.3e-10 68.2 38 81.6
Thecc.02G348700 Theobroma cacao HOM05D000765 ORTHO05D000613 8.3e-10 68.2 38 81.6
Cfa009005 Carpinus fangiana HOM05D000765 ORTHO05D000613 1.1e-09 67.8 38 78.9
Haze_12034 Corylus avellana HOM05D000765 ORTHO05D000613 1.1e-09 67.8 38 78.9
Medtr8g468330 Medicago truncatula HOM05D000765 ORTHO05D000613 1.1e-09 67.8 37 83.8
TPR.G33255 Trifolium pratense HOM05D000765 ORTHO05D000613 1.1e-09 67.8 37 83.8
TAR371G0057 Trochodendron aralioides HOM05D000765 ORTHO05D000613 1.1e-09 67.8 38 81.6
Actinidia08221 Actinidia chinensis HOM05D000765 ORTHO05D000613 1.4e-09 67.4 38 84.2
EL10Ac6g13176 Beta vulgaris HOM05D000765 ORTHO05D000613 1.4e-09 67.4 38 81.6
Dinv34173 Davidia involucrata HOM05D000765 ORTHO05D000613 1.4e-09 67.4 38 84.2
HanXRQChr04g0095911 Helianthus annuus HOM05D000765 ORTHO05D000613 1.4e-09 67.4 38 84.2
HanXRQChr17g0545151 Helianthus annuus HOM05D000765 ORTHO05D000613 1.4e-09 67.4 38 84.2
PGR102G2827 Punica granatum HOM05D000765 ORTHO05D000613 1.4e-09 67.4 38 81.6
THA.LOC104805147 Tarenaya hassleriana HOM05D000765 ORTHO05D000613 1.4e-09 67.4 38 81.6
CANSAT64G0700 Cannabis sativa HOM05D000765 ORTHO05D000613 1.9e-09 67.0 37 83.8
CiPaw.06G082700 Carya illinoinensis HOM05D000765 ORTHO05D000613 1.9e-09 67.0 38 81.6
CDE08G0866 Ceratophyllum demersum HOM05D000765 ORTHO05D000613 1.9e-09 67.0 38 81.6
DCAR_031034 Daucus carota HOM05D000765 ORTHO05D000613 1.9e-09 67.0 37 83.8
FvH4_4g31620 Fragaria vesca HOM05D000765 ORTHO05D000613 1.9e-09 67.0 37 83.8
MD13G1074600 Malus domestica HOM05D000765 ORTHO05D000613 1.9e-09 67.0 38 81.6
Nn3g17174 Nelumbo nucifera HOM05D000765 ORTHO05D000613 1.9e-09 67.0 38 81.6
QL03p064873 Quercus lobata HOM05D000765 ORTHO05D000613 1.9e-09 67.0 38 81.6
TWI38G1798 Tripterygium wilfordii HOM05D000765 ORTHO05D000613 1.9e-09 67.0 38 81.6
TWI39G1005 Tripterygium wilfordii HOM05D000765 ORTHO05D000613 1.9e-09 67.0 38 81.6
Actinidia31198 Actinidia chinensis HOM05D000765 ORTHO05D000613 2.4e-09 66.6 37 83.8
FAN07G0613 Fragaria x ananassa HOM05D000765 ORTHO05D000613 2.4e-09 66.6 37 83.8
Lsat_1_v5_gn_8_52120 Lactuca sativa HOM05D000765 ORTHO05D000613 2.4e-09 66.6 38 81.6
RcHm_v2.0_Chr4g0440131 Rosa chinensis HOM05D000765 ORTHO05D000613 2.4e-09 66.6 37 83.8
TAR622G1436 Trochodendron aralioides HOM05D000765 ORTHO05D000613 2.4e-09 66.6 38 81.6
unitig_747.g21173 Utricularia gibba HOM05D000765 ORTHO05D000613 2.4e-09 66.6 38 78.9
CAN.G512.4 Capsicum annuum HOM05D000765 ORTHO05D000613 3.2e-09 66.2 37 78.4
Os02g0827200 Oryza sativa ssp. japonica HOM05D000765 ORTHO05D000613 3.2e-09 66.2 38 76.3
PSO017G5296 Papaver somniferum HOM05D000765 ORTHO05D000613 3.2e-09 66.2 38 78.9
PSO478G0577 Papaver somniferum HOM05D000765 ORTHO05D000613 3.2e-09 66.2 38 78.9
Sc11g0001770 Simmondsia chinensis HOM05D000765 ORTHO05D000613 3.2e-09 66.2 37 81.1
TAR629G0095 Trochodendron aralioides HOM05D000765 ORTHO05D000613 3.2e-09 66.2 38 78.9
TAR629G0992 Trochodendron aralioides HOM05D000765 ORTHO05D000613 3.2e-09 66.2 38 78.9
Aqoxy3G00705 Aquilegia oxysepala HOM05D000765 ORTHO05D000613 5.4e-09 65.5 38 76.3
Eucgr.B03418 Eucalyptus grandis HOM05D000765 ORTHO05D000613 7.0e-09 65.1 37 81.1
Zm00001eb259340 Zea mays HOM05D000765 ORTHO05D000613 7.0e-09 65.1 37 81.1
Aa31LG2G7430 Aethionema arabicum HOM05D000765 ORTHO05D000613 9.2e-09 64.7 38 81.6
ClCG09G021940 Citrullus lanatus HOM05D000765 ORTHO05D000613 9.2e-09 64.7 36 77.8
Ciclev10030996m.g Citrus clementina HOM05D000765 ORTHO05D000613 9.2e-09 64.7 38 76.3
MELO3C002966.2 Cucumis melo HOM05D000765 ORTHO05D000613 9.2e-09 64.7 36 77.8
CsaV3_5G025170 Cucumis sativus L. HOM05D000765 ORTHO05D000613 9.2e-09 64.7 36 77.8
Potri.010G093600 Populus trichocarpa HOM05D000765 ORTHO05D000613 9.2e-09 64.7 38 78.9
Sabra10G0066000 Salix brachista HOM05D000765 ORTHO05D000613 9.2e-09 64.7 38 78.9
Sed0005819 Sechium edule HOM05D000765 ORTHO05D000613 9.2e-09 64.7 36 77.8
Sed0012271 Sechium edule HOM05D000765 ORTHO05D000613 9.2e-09 64.7 36 77.8
AUR62005747 Chenopodium quinoa HOM05D000765 ORTHO05D000613 1.2e-08 64.3 38 76.3
AUR62028811 Chenopodium quinoa HOM05D000765 ORTHO05D000613 1.2e-08 64.3 38 76.3
arahy.Tifrunner.gnm1.ann1.07ATAK Arachis hypogaea HOM05D003741 ORTHO05D004247 1.6e-08 63.9 49 67.3
arahy.Tifrunner.gnm1.ann1.KKV2SS Arachis hypogaea HOM05D000765 ORTHO05D000613 1.6e-08 63.9 32 93.8
Potri.008G148100 Populus trichocarpa HOM05D000765 ORTHO05D000613 1.6e-08 63.9 38 78.9
Gohir.A12G165900 Gossypium hirsutum HOM05D000765 ORTHO05D000613 2.0e-08 63.5 38 78.9
ATR0564G387 Amborella trichopoda HOM05D000765 ORTHO05D000613 2.7e-08 63.2 38 76.3
HPP92_025717 Vanilla planifolia HOM05D000765 ORTHO05D000613 2.7e-08 63.2 36 83.3
HPP92_025759 Vanilla planifolia HOM05D000765 ORTHO05D000613 2.7e-08 63.2 36 83.3
GSVIVG01020031001 Vitis vinifera HOM05D000765 ORTHO05D000613 3.5e-08 62.8 36 77.8
ATR0564G342 Amborella trichopoda HOM05D000765 ORTHO05D000613 4.6e-08 62.4 38 73.7
AagrBONN_evm.TU.Sc2ySwM_362.2807 Anthoceros agrestis HOM05D000765 ORTHO05D000613 7.8e-08 61.6 38 71.1
Mapoly0037s0109 Marchantia polymorpha HOM05D000765 ORTHO05D000613 7.8e-08 61.6 40 75.0
Lsat_1_v5_gn_7_65280 Lactuca sativa HOM05D000765 ORTHO05D000613 3.0e-07 59.7 38 71.1
Pp3c2_3000 Physcomitrium patens HOM05D000765 ORTHO05D000613 3.0e-07 59.7 36 77.8
Pp3c8_24670 Physcomitrium patens HOM05D000765 ORTHO05D000613 3.0e-07 59.7 39 64.1
Pp3c24_20510 Physcomitrium patens HOM05D000765 ORTHO05D000613 3.9e-07 59.3 39 61.5
Pp3c1_32060 Physcomitrium patens HOM05D000765 ORTHO05D000613 6.6e-07 58.5 36 75.0
SMO164G0191 Selaginella moellendorffii HOM05D000765 ORTHO05D000613 8.6e-07 58.2 39 61.5
Mapoly0009s0099 Marchantia polymorpha HOM05D000765 ORTHO05D000613 1.1e-06 57.8 39 66.7
Phvul.011G046200 Phaseolus vulgaris HOM05D001065 ORTHO05D002020 1.1e-06 57.8 59 52.5
VMungo1127G1908 Vigna mungo HOM05D001065 ORTHO05D002020 1.1e-06 57.8 59 52.5
CBR_g41453 Chara braunii HOM05D000765 ORTHO05D000613 1.5e-06 57.4 34 67.6
arahy.Tifrunner.gnm1.ann1.BB6FSG Arachis hypogaea HOM05D000323 ORTHO05D000201 1.9e-06 57.0 71 47.9
HPP92_011260 Vanilla planifolia HOM05D000765 ORTHO05D000613 1.9e-06 57.0 38 60.5
Glyma.12G044200 Glycine max HOM05D001065 ORTHO05D002020 2.5e-06 56.6 59 50.8
Haze_17899 Corylus avellana HOM05D000765 ORTHO05D000613 3.3e-06 56.2 39 59.0
Haze_17909 Corylus avellana HOM05D000765 ORTHO05D000613 3.3e-06 56.2 39 59.0
FvH4_2g40120 Fragaria vesca HOM05D000765 ORTHO05D000613 3.3e-06 56.2 39 61.5
FvH4_5g04290 Fragaria vesca HOM05D000765 ORTHO05D000613 3.3e-06 56.2 39 61.5
FvH4_5g04340 Fragaria vesca HOM05D000765 ORTHO05D000613 3.3e-06 56.2 39 61.5
FAN04G3125 Fragaria x ananassa HOM05D000765 ORTHO05D000613 3.3e-06 56.2 39 61.5
FAN13G3296 Fragaria x ananassa HOM05D000765 ORTHO05D000613 3.3e-06 56.2 39 61.5
FAN15G1819 Fragaria x ananassa HOM05D000765 ORTHO05D000613 3.3e-06 56.2 39 61.5
FAN18G1245 Fragaria x ananassa HOM05D000765 ORTHO05D000613 3.3e-06 56.2 39 61.5
FAN18G3683 Fragaria x ananassa HOM05D000765 ORTHO05D000613 3.3e-06 56.2 39 61.5
FAN18G3761 Fragaria x ananassa HOM05D000765 ORTHO05D000612 3.3e-06 56.2 39 61.5
FAN27G3329 Fragaria x ananassa HOM05D000765 ORTHO05D000613 3.3e-06 56.2 39 61.5
SalBow7G1984 Salvia bowleyana HOM05D000765 ORTHO05D000613 3.3e-06 56.2 39 61.5
Lj3g0022498 Lotus japonicus HOM05D001065 ORTHO05D002020 4.3e-06 55.8 67 47.8
SMO145G0269 Selaginella moellendorffii HOM05D000765 ORTHO05D000613 4.3e-06 55.8 57 49.1
THA.LOC104814113 Tarenaya hassleriana HOM05D000765 ORTHO05D000613 4.3e-06 55.8 39 59.0
HPP92_024968 Vanilla planifolia HOM05D000765 ORTHO05D000613 4.3e-06 55.8 43 53.5
Zm00001eb244930 Zea mays HOM05D000765 ORTHO05D000613 4.3e-06 55.8 38 65.8
SMO364G0254 Selaginella moellendorffii HOM05D000765 ORTHO05D000613 5.6e-06 55.5 33 72.7
Zm00001eb183000 Zea mays HOM05D000765 ORTHO05D000613 5.6e-06 55.5 38 65.8
Ciclev10000828m.g Citrus clementina HOM05D000765 ORTHO05D000613 9.5e-06 54.7 56 48.2
MD10G1045900 Malus domestica HOM05D000765 ORTHO05D000613 9.5e-06 54.7 56 48.2
Os02g0576600 Oryza sativa ssp. japonica HOM05D000765 ORTHO05D000613 9.5e-06 54.7 38 63.2
Os03g0170900 Oryza sativa ssp. japonica HOM05D000765 ORTHO05D000613 9.5e-06 54.7 38 57.9


User provided reference genes

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