Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.2Q0DPQ Arachis hypogaea HOM05D006104 ORTHO05D008303 2.6e-74 282.0 142 100.0
arahy.Tifrunner.gnm1.ann1.LG1UYC Arachis hypogaea HOM05D006104 ORTHO05D008303 2.6e-66 255.4 159 84.3
arahy.Tifrunner.gnm1.ann1.W9ZMNH Arachis hypogaea HOM05D006104 ORTHO05D008303 9.7e-45 183.7 122 77.0
arahy.Tifrunner.gnm1.ann1.4P08NV Arachis hypogaea HOM05D006104 ORTHO05D008303 8.2e-44 180.6 113 81.4
arahy.Tifrunner.gnm1.ann1.B0P6V2 Arachis hypogaea HOM05D006104 ORTHO05D008303 1.1e-43 180.3 122 74.6
Lj6g0001971 Lotus japonicus HOM05D006104 ORTHO05D008303 3.0e-38 162.2 131 62.6
Ca_15100_v3 Cicer arietinum L. HOM05D006104 ORTHO05D008303 4.4e-37 158.3 116 68.1
Phvul.006G083500 Phaseolus vulgaris HOM05D006104 ORTHO05D008303 6.3e-36 154.5 119 64.7
Psat5g144680 Pisum sativum HOM05D006104 ORTHO05D008303 6.3e-36 154.5 98 73.5
TPR.G14061 Trifolium pratense HOM05D006104 ORTHO05D008303 8.2e-36 154.1 133 59.4
VMungo0540G0919 Vigna mungo HOM05D006104 ORTHO05D008303 1.8e-35 152.9 119 64.7
Glyma.11G202900 Glycine max HOM05D006104 ORTHO05D008303 5.3e-35 151.4 131 59.5
Glyma.18G047900 Glycine max HOM05D006104 ORTHO05D008303 7.0e-35 151.0 116 66.4
Lalb_Chr18g0053941 Lupinus albus HOM05D006104 ORTHO05D008303 2.6e-34 149.1 112 67.0
Cfa008019 Carpinus fangiana HOM05D006104 ORTHO05D008303 1.3e-33 146.7 128 58.6
Haze_14041 Corylus avellana HOM05D006104 ORTHO05D008303 2.9e-33 145.6 115 66.1
Medtr3g063250 Medicago truncatula HOM05D006104 ORTHO05D008303 3.8e-33 145.2 131 56.5
CANSAT78G2105 Cannabis sativa HOM05D006104 ORTHO05D008303 5.0e-33 144.8 113 64.6
Dinv19095 Davidia involucrata HOM05D006104 ORTHO05D008303 8.5e-33 144.1 111 65.8
CsaV3_5G024350 Cucumis sativus L. HOM05D006104 ORTHO05D008303 1.5e-32 143.3 126 57.9
QL02p055508 Quercus lobata HOM05D006104 ORTHO05D008303 1.5e-32 143.3 115 65.2
Medtr3g063240 Medicago truncatula HOM05D006104 ORTHO05D008303 1.9e-32 142.9 128 57.0
Sc09g0004650 Simmondsia chinensis HOM05D006104 ORTHO05D008303 3.2e-32 142.1 113 63.7
ClCG01G008400 Citrullus lanatus HOM05D006104 ORTHO05D008303 5.5e-32 141.4 126 57.1
Nitab4.5_0002297g0090 Nicotiana tabacum HOM05D006104 ORTHO05D008303 5.5e-32 141.4 122 59.8
Nitab4.5_0008083g0020 Nicotiana tabacum HOM05D006104 ORTHO05D008303 5.5e-32 141.4 122 59.0
CiPaw.03G009900 Carya illinoinensis HOM05D006104 ORTHO05D008303 9.4e-32 140.6 111 66.7
FvH4_5g39720 Fragaria vesca HOM05D006104 ORTHO05D008303 9.4e-32 140.6 114 64.0
FAN08G3450 Fragaria x ananassa HOM05D006104 ORTHO05D008303 9.4e-32 140.6 114 64.0
FAN18G3652 Fragaria x ananassa HOM05D006104 ORTHO05D008303 9.4e-32 140.6 114 64.0
Oeu058858.1 Olea europaea HOM05D006104 ORTHO05D008303 9.4e-32 140.6 110 64.5
Prupe.8G267800 Prunus persica HOM05D006104 ORTHO05D008303 1.2e-31 140.2 117 62.4
Eucgr.J01650 Eucalyptus grandis HOM05D006104 ORTHO05D008303 1.6e-31 139.8 112 64.3
Lj4A249G56 Lonicera japonica HOM05D006104 ORTHO05D008303 1.6e-31 139.8 122 58.2
AUR62035547 Chenopodium quinoa HOM05D006104 ORTHO05D008303 2.1e-31 139.4 113 61.9
Rhsim10G0186700 Rhododendron simsii HOM05D006104 ORTHO05D008303 2.1e-31 139.4 111 63.1
RcHm_v2.0_Chr7g0242021 Rosa chinensis HOM05D006104 ORTHO05D008303 2.1e-31 139.4 115 62.6
Hund22221 Selenicereus undatus HOM05D006104 ORTHO05D008303 2.1e-31 139.4 114 61.4
MELO3C025108.2 Cucumis melo HOM05D006104 ORTHO05D008303 3.6e-31 138.7 93 71.0
Sed0008277 Sechium edule HOM05D006104 ORTHO05D008303 3.6e-31 138.7 115 61.7
PGSC0003DMG400021455 Solanum tuberosum HOM05D006104 ORTHO05D008303 6.1e-31 137.9 131 53.4
Ah.06g191390 Amaranthus hybridus HOM05D006104 ORTHO05D008303 8.0e-31 137.5 114 60.5
Actinidia32997 Actinidia chinensis HOM05D006104 ORTHO05D008303 1.0e-30 137.1 111 61.3
Solyc02g036470.4 Solanum lycopersicum HOM05D006104 ORTHO05D008303 1.0e-30 137.1 131 53.4
DCAR_003391 Daucus carota HOM05D006104 ORTHO05D008303 1.4e-30 136.7 115 60.0
FAN04G1807 Fragaria x ananassa HOM05D006104 ORTHO05D008303 1.4e-30 136.7 82 80.5
SGA_v2.0_scaffold199G41251 Striga asiatica HOM05D006104 ORTHO05D008303 1.4e-30 136.7 129 57.4
vmacro20444 Vaccinium macrocarpon HOM05D006104 ORTHO05D008303 1.4e-30 136.7 111 62.2
Migut.K01201 Erythranthe guttata HOM05D006104 ORTHO05D008303 1.8e-30 136.3 108 65.7
Sopen02g011830 Solanum pennellii HOM05D006104 ORTHO05D008303 1.8e-30 136.3 131 52.7
MSTRG.15618 Avicennia marina HOM05D006104 ORTHO05D008303 2.3e-30 136.0 115 60.9
AUR62037537 Chenopodium quinoa HOM05D006104 ORTHO05D008303 3.0e-30 135.6 115 59.1
Peaxi162Scf00784g00028 Petunia axillaris HOM05D006104 ORTHO05D008303 3.0e-30 135.6 111 61.3
Cpa.g.sc108.21 Carica papaya HOM05D006104 ORTHO05D008303 5.2e-30 134.8 122 54.9
MD09G1187600 Malus domestica HOM05D006104 ORTHO05D008303 5.2e-30 134.8 114 62.3
EL10Ac1g01448 Beta vulgaris HOM05D006104 ORTHO05D008303 8.8e-30 134.0 114 58.8
Manes.01G125800 Manihot esculenta HOM05D006104 ORTHO05D008303 8.8e-30 134.0 120 59.2
TWI74G1645 Tripterygium wilfordii HOM05D006104 ORTHO05D008303 1.2e-29 133.7 111 63.1
CAN.G304.9 Capsicum annuum HOM05D006104 ORTHO05D008303 1.5e-29 133.3 109 60.6
CARHR076690 Cardamine hirsuta HOM05D006104 ORTHO05D008303 2.6e-29 132.5 111 60.4
Thecc.04G056600 Theobroma cacao HOM05D006104 ORTHO05D008303 2.6e-29 132.5 123 56.1
Sabra12G0109100 Salix brachista HOM05D006104 ORTHO05D008303 3.3e-29 132.1 117 59.0
CSS0044834 Camellia sinensis var. sinensis HOM05D006104 ORTHO05D008303 4.4e-29 131.7 73 84.9
Duzib138G0961 Durio zibethinus HOM05D006104 ORTHO05D008303 4.4e-29 131.7 111 60.4
PGR042G1876 Punica granatum HOM05D006104 ORTHO05D008303 5.7e-29 131.3 119 59.7
Gohir.A12G053200 Gossypium hirsutum HOM05D006104 ORTHO05D008303 7.5e-29 131.0 119 56.3
Lsat_1_v5_gn_8_114940 Lactuca sativa HOM05D006104 ORTHO05D008303 7.5e-29 131.0 115 57.4
Thhalv10020801m.g Eutrema salsugineum HOM05D006104 ORTHO05D008303 9.7e-29 130.6 111 59.5
TAR371G0041 Trochodendron aralioides HOM05D006104 ORTHO05D008303 9.7e-29 130.6 111 59.5
COL.COLO4_13439 Corchorus olitorius HOM05D006104 ORTHO05D008303 1.3e-28 130.2 109 61.5
Gohir.D12G051700 Gossypium hirsutum HOM05D006104 ORTHO05D008303 1.3e-28 130.2 113 58.4
Gorai.008G055000 Gossypium raimondii HOM05D006104 ORTHO05D008303 1.3e-28 130.2 113 58.4
Hma1.2p1_0085F.1_g043890 Hydrangea macrophylla HOM05D006104 ORTHO05D008303 1.3e-28 130.2 115 61.7
Sp3g01720 Schrenkiella parvula HOM05D006104 ORTHO05D008303 1.3e-28 130.2 107 61.7
ECA232G1605 Erigeron canadensis HOM05D006104 ORTHO05D008303 1.7e-28 129.8 119 55.5
Carub.0003s0179 Capsella rubella HOM05D006104 ORTHO05D008303 2.2e-28 129.4 111 58.6
Potri.012G145300 Populus trichocarpa HOM05D006104 ORTHO05D008303 2.2e-28 129.4 115 58.3
SalBow5G0256 Salvia bowleyana HOM05D006104 ORTHO05D008303 3.7e-28 128.6 115 60.0
HanXRQChr15g0486461 Helianthus annuus HOM05D006104 ORTHO05D008303 4.8e-28 128.3 115 53.0
AT3G02690 Arabidopsis thaliana HOM05D006104 ORTHO05D008303 8.2e-28 127.5 109 57.8
AL3G12080 Arabidopsis lyrata HOM05D006104 ORTHO05D008303 1.1e-27 127.1 111 57.7
BolC1t05884H Brassica oleracea HOM05D006104 ORTHO05D008303 1.1e-27 127.1 111 57.7
Aa31LG5G13170 Aethionema arabicum HOM05D006104 ORTHO05D008303 1.4e-27 126.7 109 59.6
BNapus_Darmor_BZH_scaffold_122p00170 Brassica napus HOM05D006104 ORTHO05D008303 2.4e-27 125.9 111 57.7
BraA01t04624Z Brassica rapa HOM05D006104 ORTHO05D008303 3.1e-27 125.6 109 57.8
Ciclev10011871m.g Citrus clementina HOM05D006104 ORTHO05D008303 4.1e-27 125.2 111 59.5
PSO063G5766 Papaver somniferum HOM05D006104 ORTHO05D008303 4.1e-27 125.2 121 54.5
Atru.chr1.2189 Acer truncatum HOM05D006104 ORTHO05D008303 5.3e-27 124.8 110 57.3
Nn4g25028 Nelumbo nucifera HOM05D006104 ORTHO05D008303 5.3e-27 124.8 106 61.3
THA.LOC104820927 Tarenaya hassleriana HOM05D006104 ORTHO05D008303 5.3e-27 124.8 111 58.6
Aqoxy3G04351 Aquilegia oxysepala HOM05D006104 ORTHO05D008303 4.5e-26 121.7 111 55.9
CDE04G1404 Ceratophyllum demersum HOM05D006104 ORTHO05D008303 1.7e-25 119.8 115 56.5
HPP92_022205 Vanilla planifolia HOM05D006104 ORTHO05D008303 2.2e-25 119.4 117 55.6
arahy.Tifrunner.gnm1.ann1.12AD17 Arachis hypogaea HOM05D000052 ORTHO05D000046 2.9e-25 119.0 61 96.7
unitig_748.g7253 Utricularia gibba HOM05D006104 ORTHO05D008303 3.8e-25 118.6 109 57.8
Zm00001eb044830 Zea mays HOM05D006104 ORTHO05D008303 3.8e-25 118.6 111 56.8
Psat0s2701g0160 Pisum sativum HOM05D006104 ORTHO05D000113 5.0e-25 118.2 131 51.9
AagrBONN_evm.TU.Sc2ySwM_368.1984 Anthoceros agrestis HOM05D006104 ORTHO05D008303 6.5e-25 117.9 120 50.8
ATR0124G053 Amborella trichopoda HOM05D006104 ORTHO05D008303 1.1e-24 117.1 115 51.3
SEGI_11411 Sequoiadendron giganteum HOM05D006104 ORTHO05D008303 4.2e-24 115.2 106 54.7
SMO364G0667 Selaginella moellendorffii HOM05D006104 ORTHO05D008303 1.2e-23 113.6 139 44.6
MBI06_g37978_MAGBIO Magnolia biondii HOM05D006104 ORTHO05D008303 6.1e-23 111.3 121 51.2
Mapoly0068s0059 Marchantia polymorpha HOM05D006104 ORTHO05D008303 6.1e-23 111.3 132 44.7
Pp3c19_6070 Physcomitrium patens HOM05D006104 ORTHO05D008303 1.4e-22 110.2 120 45.0
Cc07_g12610 Coffea canephora HOM05D006104 ORTHO05D008303 2.0e-21 106.3 94 61.7
MCO16G393 Micromonas commoda HOM05D006104 ORTHO05D008303 2.0e-21 106.3 105 50.5
GSVIVG01033198001 Vitis vinifera HOM05D006104 ORTHO05D008303 8.3e-20 100.9 94 56.4
CBR_g22386 Chara braunii HOM05D006104 ORTHO05D008303 5.4e-19 98.2 122 41.0
Pp3c7_24690 Physcomitrium patens HOM05D006104 ORTHO05D008303 1.9e-16 89.7 73 57.5
Cre12.g507950 Chlamydomonas reinhardtii HOM05D006104 ORTHO05D008303 1.0e-14 84.0 105 44.8
BNapus_Darmor_BZH_scaffold_99p00200 Brassica napus HOM05D006104 ORTHO05D008303 9.8e-13 77.4 81 49.4
PRCOL_00000403 Prasinoderma coloniale HOM05D006104 ORTHO05D008303 2.0e-10 69.7 94 40.4
Psat7g173760 Pisum sativum HOM05D006104 ORTHO05D008303 1.0e-09 67.4 37 81.1
Psat4g208440 Pisum sativum HOM05D006104 ORTHO05D008303 1.2e-07 60.5 84 41.7
EL10Ac4g08870 Beta vulgaris HOM05D006104 ORTHO05D008303 6.8e-06 54.7 60 46.7
Psat4g208520 Pisum sativum HOM05D006104 ORTHO05D008303 8.9e-06 54.3 67 47.8


User provided reference genes

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