Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.2J0XRF Arachis hypogaea HOM05D004971 ORTHO05D006289 3.1e-81 305.4 201 100.0
arahy.Tifrunner.gnm1.ann1.D57MTL Arachis hypogaea HOM05D004971 ORTHO05D006289 1.8e-73 279.6 200 88.0
Glyma.08G035500 Glycine max HOM05D004971 ORTHO05D006289 6.8e-28 128.3 155 44.5
VMungo0251G3379 Vigna mungo HOM05D004971 ORTHO05D006289 1.2e-27 127.5 155 45.2
Psat7g014440 Pisum sativum HOM05D004971 ORTHO05D006289 1.5e-27 127.1 156 42.9
Atru.chr7.1418 Acer truncatum HOM05D004971 ORTHO05D006289 2.2e-26 123.2 155 43.9
Lj4g0001585 Lotus japonicus HOM05D004971 ORTHO05D006289 2.2e-26 123.2 149 42.3
Lalb_Chr05g0223101 Lupinus albus HOM05D004971 ORTHO05D006289 2.2e-26 123.2 155 42.6
Medtr8g102950 Medicago truncatula HOM05D004971 ORTHO05D006289 2.2e-26 123.2 155 42.6
TPR.G23453 Trifolium pratense HOM05D004971 ORTHO05D006289 3.8e-26 122.5 155 43.9
HPP92_012921 Vanilla planifolia HOM05D004971 ORTHO05D006289 1.1e-25 120.9 155 43.9
Ca_17315_v3 Cicer arietinum L. HOM05D004971 ORTHO05D006289 1.4e-25 120.6 145 46.9
HPP92_012900 Vanilla planifolia HOM05D004971 ORTHO05D006289 3.2e-25 119.4 155 43.2
Os08g0540500 Oryza sativa ssp. japonica HOM05D004971 ORTHO05D006289 5.4e-25 118.6 148 41.2
CANSAT56G2306 Cannabis sativa HOM05D004971 ORTHO05D006289 1.2e-24 117.5 154 39.0
Phvul.002G310900 Phaseolus vulgaris HOM05D004971 ORTHO05D006289 1.2e-24 117.5 154 40.9
A03p16290 Brassica napus HOM05D004971 ORTHO05D006289 4.6e-24 115.5 145 40.7
CANSAT56G1645 Cannabis sativa HOM05D004971 ORTHO05D006289 6.0e-24 115.2 154 38.3
Nn3g18146 Nelumbo nucifera HOM05D004971 ORTHO05D006289 6.0e-24 115.2 155 41.3
arahy.Tifrunner.gnm1.ann1.050WC1 Arachis hypogaea HOM05D004971 ORTHO05D006289 1.0e-23 114.4 164 39.0
GSVIVG01015340001 Vitis vinifera HOM05D004971 ORTHO05D006289 2.3e-23 113.2 147 41.5
arahy.Tifrunner.gnm1.ann1.R8N6MQ Arachis hypogaea HOM05D004971 ORTHO05D006289 3.0e-23 112.8 157 40.1
Cfa003218 Carpinus fangiana HOM05D001382 ORTHO05D001266 3.0e-23 112.8 139 43.9
TAR626G1908 Trochodendron aralioides HOM05D001382 ORTHO05D006289 3.0e-23 112.8 155 41.3
TAR636G2606 Trochodendron aralioides HOM05D004971 ORTHO05D006289 3.0e-23 112.8 155 41.3
CiPaw.03G227700 Carya illinoinensis HOM05D004971 ORTHO05D006289 3.9e-23 112.5 154 40.9
Lalb_Chr14g0371731 Lupinus albus HOM05D004971 ORTHO05D006289 3.9e-23 112.5 168 38.7
Gohir.D07G007800 Gossypium hirsutum HOM05D004971 ORTHO05D006289 6.6e-23 111.7 157 41.4
Gorai.001G007500 Gossypium raimondii HOM05D004971 ORTHO05D006289 6.6e-23 111.7 157 41.4
BraA03t10920Z Brassica rapa HOM05D004971 ORTHO05D006289 1.1e-22 110.9 146 39.7
CDE11G0552 Ceratophyllum demersum HOM05D004971 ORTHO05D006289 1.5e-22 110.5 150 40.0
FAN19G1252 Fragaria x ananassa HOM05D001382 ORTHO05D001266 1.5e-22 110.5 154 41.6
CSS0031404 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 1.9e-22 110.2 146 40.4
ECA240G1764 Erigeron canadensis HOM05D004971 ORTHO05D006289 2.5e-22 109.8 147 40.1
FAN26G3039 Fragaria x ananassa HOM05D001382 ORTHO05D001266 2.5e-22 109.8 157 41.4
PSO675G4950 Papaver somniferum HOM05D004971 ORTHO05D006289 2.5e-22 109.8 150 41.3
Zm00001eb198370 Zea mays HOM05D004971 ORTHO05D006289 2.5e-22 109.8 145 40.0
Gohir.A07G004400 Gossypium hirsutum HOM05D004971 ORTHO05D006289 3.3e-22 109.4 157 40.8
PSO541G6366 Papaver somniferum HOM05D004971 ORTHO05D006289 3.3e-22 109.4 150 40.7
Actinidia32663 Actinidia chinensis HOM05D004971 ORTHO05D006289 4.3e-22 109.0 161 37.9
Eucgr.C03795 Eucalyptus grandis HOM05D004971 ORTHO05D006289 4.3e-22 109.0 155 38.7
Thhalv10014188m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 5.6e-22 108.6 145 40.0
FvH4_1g05710 Fragaria vesca HOM05D004971 ORTHO05D006289 5.6e-22 108.6 157 40.8
Lsat_1_v5_gn_7_41360 Lactuca sativa HOM05D004971 ORTHO05D006289 9.6e-22 107.8 145 38.6
AT5G51130 Arabidopsis thaliana HOM05D004971 ORTHO05D006289 1.2e-21 107.5 151 39.1
QL01p004043 Quercus lobata HOM05D004971 ORTHO05D006289 1.2e-21 107.5 151 41.1
FAN23G0317 Fragaria x ananassa HOM05D001382 ORTHO05D006289 1.6e-21 107.1 157 40.8
FAN28G1806 Fragaria x ananassa HOM05D001382 ORTHO05D006289 1.6e-21 107.1 157 40.8
Aa31LG3G7640 Aethionema arabicum HOM05D004971 ORTHO05D006289 2.1e-21 106.7 147 40.1
ClCG06G008900 Citrullus lanatus HOM05D004971 ORTHO05D006289 2.1e-21 106.7 156 40.4
MELO3C024707.2 Cucumis melo HOM05D004971 ORTHO05D006289 2.1e-21 106.7 145 41.4
Manes.16G112100 Manihot esculenta HOM05D004971 ORTHO05D006289 2.1e-21 106.7 154 37.7
BcaC01g06076 Brassica carinata HOM05D004971 ORTHO05D006289 2.8e-21 106.3 145 39.3
Duzib150G1337 Durio zibethinus HOM05D004971 ORTHO05D006289 2.8e-21 106.3 155 40.6
Lalb_Chr24g0397391 Lupinus albus HOM05D004971 ORTHO05D006289 2.8e-21 106.3 143 44.1
THA.LOC104811095 Tarenaya hassleriana HOM05D004971 ORTHO05D006289 2.8e-21 106.3 150 38.7
AagrBONN_evm.TU.Sc2ySwM_117.3390 Anthoceros agrestis HOM05D004971 ORTHO05D006289 3.6e-21 105.9 149 41.6
CARHR256940 Cardamine hirsuta HOM05D004971 ORTHO05D006289 3.6e-21 105.9 146 37.7
RcHm_v2.0_Chr2g0091361 Rosa chinensis HOM05D004971 ORTHO05D006289 3.6e-21 105.9 154 40.3
AL8G25390 Arabidopsis lyrata HOM05D004971 ORTHO05D006289 4.7e-21 105.5 151 39.1
Rhsim03G0239000 Rhododendron simsii HOM05D004971 ORTHO05D006289 4.7e-21 105.5 137 38.7
Sopen05g028390 Solanum pennellii HOM05D004971 ORTHO05D006289 4.7e-21 105.5 154 35.1
Dinv41645 Davidia involucrata HOM05D004971 ORTHO05D006289 8.1e-21 104.8 155 38.1
Lj7A659G31 Lonicera japonica HOM05D004971 ORTHO05D006289 1.1e-20 104.4 152 38.8
C03p19180 Brassica napus HOM05D004971 ORTHO05D006289 1.4e-20 104.0 146 37.7
Prupe.7G224700 Prunus persica HOM05D004971 ORTHO05D006289 1.4e-20 104.0 151 37.1
BcaC01g06098 Brassica carinata HOM05D004971 ORTHO05D006289 1.8e-20 103.6 146 37.7
BolC3t14306H Brassica oleracea HOM05D004971 ORTHO05D006289 1.8e-20 103.6 146 37.7
Migut.J01131 Erythranthe guttata HOM05D004971 ORTHO05D006289 2.4e-20 103.2 137 38.7
Nitab4.5_0003331g0010 Nicotiana tabacum HOM05D004971 ORTHO05D006289 2.4e-20 103.2 154 36.4
Sc08g0007770 Simmondsia chinensis HOM05D004971 ORTHO05D006289 2.4e-20 103.2 154 40.3
Solyc05g050000.3 Solanum lycopersicum HOM05D004971 ORTHO05D006289 3.1e-20 102.8 154 34.4
COL.COLO4_34800 Corchorus olitorius HOM05D004971 ORTHO05D006289 4.0e-20 102.4 137 42.3
Haze_02526 Corylus avellana HOM05D004971 ORTHO05D006289 4.0e-20 102.4 131 42.0
HanXRQChr09g0239411 Helianthus annuus HOM05D004971 ORTHO05D006289 4.0e-20 102.4 152 36.8
BcaC03g14623 Brassica carinata HOM05D004971 ORTHO05D006289 6.9e-20 101.7 149 35.6
BolC2t08195H Brassica oleracea HOM05D004971 ORTHO05D006289 6.9e-20 101.7 149 35.6
Carub.0008s1117 Capsella rubella HOM05D004971 ORTHO05D006289 6.9e-20 101.7 150 35.3
Sabra18G0073100 Salix brachista HOM05D004971 ORTHO05D006289 9.0e-20 101.3 151 39.1
Sed0000382 Sechium edule HOM05D004971 ORTHO05D006289 1.2e-19 100.9 146 39.0
SGA_v2.0_scaffold20G09148 Striga asiatica HOM05D004971 ORTHO05D006289 1.5e-19 100.5 143 38.5
C02p20580 Brassica napus HOM05D004971 ORTHO05D006289 2.0e-19 100.1 149 35.6
Nitab4.5_0000066g0130 Nicotiana tabacum HOM05D004971 ORTHO05D006289 2.0e-19 100.1 154 35.7
PGR102G0147 Punica granatum HOM05D004971 ORTHO05D006289 2.0e-19 100.1 147 40.1
SGA_v2.0_scaffold22G09903 Striga asiatica HOM05D004971 ORTHO05D006289 2.0e-19 100.1 140 37.1
MD15G1192600 Malus domestica HOM05D004971 ORTHO05D006289 2.6e-19 99.8 145 39.3
Sp6g13340 Schrenkiella parvula HOM05D004971 ORTHO05D006289 2.6e-19 99.8 151 35.1
Potri.018G084700 Populus trichocarpa HOM05D004971 ORTHO05D006289 3.4e-19 99.4 151 37.1
Aqoxy7G01513 Aquilegia oxysepala HOM05D004971 ORTHO05D006289 4.4e-19 99.0 150 37.3
Hund26242 Selenicereus undatus HOM05D004971 ORTHO05D006289 4.4e-19 99.0 157 37.6
Thecc.09G104800 Theobroma cacao HOM05D004971 ORTHO05D006289 4.4e-19 99.0 156 37.8
MSTRG.19566 Avicennia marina HOM05D004971 ORTHO05D006289 5.8e-19 98.6 146 34.9
TWI12G1172 Tripterygium wilfordii HOM05D004971 ORTHO05D006289 5.8e-19 98.6 76 55.3
Cc06_g10130 Coffea canephora HOM05D004971 ORTHO05D006289 7.6e-19 98.2 137 37.2
BcaB05g24018 Brassica carinata HOM05D004971 ORTHO05D006289 9.9e-19 97.8 145 35.9
AUR62021639 Chenopodium quinoa HOM05D004971 ORTHO05D006289 9.9e-19 97.8 152 38.8
A02p12480 Brassica napus HOM05D004971 ORTHO05D006289 1.7e-18 97.1 151 36.4
BraA02t06311Z Brassica rapa HOM05D004971 ORTHO05D006289 1.7e-18 97.1 151 36.4
SEGI_33858 Sequoiadendron giganteum HOM05D004971 ORTHO05D006289 2.2e-18 96.7 75 56.0
CsaV3_1G020790 Cucumis sativus L. HOM05D004971 ORTHO05D006289 4.9e-18 95.5 128 41.4
Nitab4.5_0002165g0080 Nicotiana tabacum HOM05D004971 ORTHO05D006289 4.9e-18 95.5 76 57.9
vmacro06238 Vaccinium macrocarpon HOM05D004971 ORTHO05D006289 1.1e-17 94.4 131 39.7
unitig_748.g8739 Utricularia gibba HOM05D004971 ORTHO05D006289 2.4e-17 93.2 137 35.0
Peaxi162Scf00539g00614 Petunia axillaris HOM05D004971 ORTHO05D006289 3.2e-17 92.8 150 37.3
SMO232G0003 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 3.2e-17 92.8 149 34.9
PGSC0003DMG400021659 Solanum tuberosum HOM05D004971 ORTHO05D006289 3.2e-17 92.8 145 33.8
Ciclev10009268m.g Citrus clementina HOM05D004971 ORTHO05D006289 5.4e-17 92.0 79 54.4
CAN.G399.3 Capsicum annuum HOM05D004971 ORTHO05D006289 9.3e-17 91.3 132 37.1
Lalb_Chr24g0397371 Lupinus albus HOM05D004971 ORTHO05D006289 9.3e-17 91.3 130 43.1
Oeu000366.2 Olea europaea HOM05D004971 ORTHO05D006289 9.3e-17 91.3 135 37.8
HanXRQChr03g0061421 Helianthus annuus HOM05D004971 ORTHO05D006289 2.1e-16 90.1 64 60.9
SHI02711 Sapria himalayana HOM05D004971 ORTHO05D006289 2.7e-16 89.7 138 37.7
DCAR_028679 Daucus carota HOM05D004971 ORTHO05D006289 4.6e-16 89.0 125 40.0
CBR_g687 Chara braunii HOM05D004971 ORTHO05D006289 1.0e-15 87.8 71 50.7
Mapoly0002s0233 Marchantia polymorpha HOM05D004971 ORTHO05D006289 1.0e-15 87.8 89 43.8
Haze_02523 Corylus avellana HOM05D004971 ORTHO05D006289 2.3e-15 86.7 120 40.8
AUR62008451 Chenopodium quinoa HOM05D004971 ORTHO05D006289 5.1e-15 85.5 124 39.5
SMO241G0030 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 8.7e-15 84.7 150 34.0
Pp3c17_15270 Physcomitrium patens HOM05D004971 ORTHO05D006289 1.5e-14 84.0 79 44.3
Thhalv10006518m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 1.9e-14 83.6 132 37.9
Thhalv10027230m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 1.9e-14 83.6 132 37.9
Oeu017816.1 Olea europaea HOM05D004971 ORTHO05D006289 2.1e-13 80.1 125 35.2
Thhalv10026861m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 6.2e-13 78.6 129 36.4
Thhalv10027410m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 6.2e-13 78.6 129 36.4
Thhalv10027350m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 1.1e-12 77.8 137 35.0
Cre15.g636450 Chlamydomonas reinhardtii HOM05D004971 ORTHO05D006289 1.4e-12 77.4 84 38.1
Actinidia07401 Actinidia chinensis HOM05D004971 ORTHO05D006289 2.4e-12 76.6 69 50.7
CSS0032398 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 1.2e-11 74.3 49 63.3
MCO09G154 Micromonas commoda HOM05D004971 ORTHO05D006289 2.6e-11 73.2 77 46.8
Cpa.g.sc40.24 Carica papaya HOM05D004971 ORTHO05D006289 7.6e-11 71.6 49 63.3
PRCOL_00000240 Prasinoderma coloniale HOM05D004971 ORTHO05D006289 2.1e-08 63.5 77 39.0
Nitab4.5_0001706g0070 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.9e-06 57.0 54 48.1
MD02G1058100 Malus domestica HOM05D004971 ORTHO05D006289 9.6e-06 54.7 33 66.7


User provided reference genes

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