Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.2HFS1Z Arachis hypogaea HOM05D006816 ORTHO05D008666 8.7e-252 873.2 465 100.0
arahy.Tifrunner.gnm1.ann1.CH9KSW Arachis hypogaea HOM05D006816 ORTHO05D008666 1.1e-243 846.3 465 97.4
Lalb_Chr07g0185401 Lupinus albus HOM05D006816 ORTHO05D008666 1.1e-166 590.5 404 77.2
Phvul.002G259600 Phaseolus vulgaris HOM05D006816 ORTHO05D008666 4.9e-162 575.1 437 72.5
Glyma.05G174600 Glycine max HOM05D006816 ORTHO05D008666 2.7e-160 569.3 436 72.2
VMungo0251G0196 Vigna mungo HOM05D006816 ORTHO05D008666 1.6e-157 560.1 435 72.2
Ca_17778_v3 Cicer arietinum L. HOM05D006816 ORTHO05D008666 5.2e-156 555.1 379 77.3
TPR.G6183 Trifolium pratense HOM05D006816 ORTHO05D008666 9.9e-155 550.8 422 70.1
Medtr8g089810 Medicago truncatula HOM05D006816 ORTHO05D008666 4.2e-153 545.4 378 74.9
Lj4g0008868 Lotus japonicus HOM05D006816 ORTHO05D008666 1.3e-151 540.4 417 71.2
Psat7g059360 Pisum sativum HOM05D006816 ORTHO05D008666 5.1e-143 511.9 417 68.3
TAR622G0126 Trochodendron aralioides HOM05D006816 ORTHO05D008666 1.8e-124 450.3 432 59.3
QL03p057598 Quercus lobata HOM05D006816 ORTHO05D008666 1.9e-118 430.3 431 58.2
Ciclev10030964m.g Citrus clementina HOM05D006816 ORTHO05D008666 2.5e-118 429.9 447 58.2
Nn4g22582 Nelumbo nucifera HOM05D006816 ORTHO05D008666 1.8e-116 423.7 406 58.9
Thecc.02G261900 Theobroma cacao HOM05D006816 ORTHO05D008666 4.1e-116 422.5 444 58.6
Dinv15216 Davidia involucrata HOM05D006816 ORTHO05D008666 5.3e-116 422.2 429 59.9
GSVIVG01000542001 Vitis vinifera HOM05D006816 ORTHO05D008666 5.3e-116 422.2 471 56.3
Actinidia01356 Actinidia chinensis HOM05D006816 ORTHO05D008666 2.9e-114 416.4 423 58.6
CANSAT01G2021 Cannabis sativa HOM05D006816 ORTHO05D008666 1.1e-113 414.5 404 59.2
CSS0008455 Camellia sinensis var. sinensis HOM05D006816 ORTHO05D008666 5.5e-113 412.1 377 60.2
FvH4_4g25720 Fragaria vesca HOM05D006816 ORTHO05D008666 3.6e-112 409.5 412 59.2
Gohir.D02G158100 Gossypium hirsutum HOM05D006816 ORTHO05D008666 1.0e-111 407.9 411 60.3
Gorai.005G177300 Gossypium raimondii HOM05D006816 ORTHO05D008666 1.0e-111 407.9 411 60.3
PGR119G0117 Punica granatum HOM05D006816 ORTHO05D008666 3.0e-111 406.4 392 61.2
COL.COLO4_23463 Corchorus olitorius HOM05D006816 ORTHO05D008666 3.9e-111 406.0 409 58.7
Atru.chr11.2152 Acer truncatum HOM05D006816 ORTHO05D008666 1.5e-110 404.1 400 59.5
MD13G1099700 Malus domestica HOM05D006816 ORTHO05D008666 4.3e-110 402.5 435 56.1
CiPaw.05G180700 Carya illinoinensis HOM05D006816 ORTHO05D008666 5.7e-110 402.1 364 63.7
DCAR_031163 Daucus carota HOM05D006816 ORTHO05D008666 5.7e-110 402.1 371 60.4
Lj3C1059T10 Lonicera japonica HOM05D006816 ORTHO05D008666 1.7e-109 400.6 414 57.5
TWI36G0164 Tripterygium wilfordii HOM05D006816 ORTHO05D008666 1.7e-109 400.6 422 56.6
Gohir.A03G133700 Gossypium hirsutum HOM05D006816 ORTHO05D008666 1.1e-108 397.9 388 61.3
FAN17G1412 Fragaria x ananassa HOM05D006816 ORTHO05D008666 3.1e-108 396.4 382 61.3
Haze_12261 Corylus avellana HOM05D006816 ORTHO05D008666 4.1e-108 396.0 488 51.6
PSO063G6228 Papaver somniferum HOM05D006816 ORTHO05D008666 6.9e-108 395.2 411 55.0
Cpa.g.sc33.36 Carica papaya HOM05D006816 ORTHO05D008666 1.2e-107 394.4 371 60.4
AUR62024254 Chenopodium quinoa HOM05D006816 ORTHO05D008666 2.0e-107 393.7 376 58.5
Eucgr.H02486 Eucalyptus grandis HOM05D006816 ORTHO05D008666 4.5e-107 392.5 399 57.6
PSO754G0080 Papaver somniferum HOM05D006816 ORTHO05D008666 5.9e-107 392.1 411 54.5
Sabra10G0021100 Salix brachista HOM05D006816 ORTHO05D008666 5.9e-107 392.1 457 54.0
FAN22G0176 Fragaria x ananassa HOM05D006816 ORTHO05D008666 1.3e-106 391.0 412 57.5
FAN12G1622 Fragaria x ananassa HOM05D006816 ORTHO05D008666 5.0e-106 389.0 382 60.5
RcHm_v2.0_Chr4g0433151 Rosa chinensis HOM05D006816 ORTHO05D008666 6.5e-106 388.7 413 56.4
CsaV3_5G031010 Cucumis sativus L. HOM05D006816 ORTHO05D008666 1.1e-105 387.9 442 54.1
Nitab4.5_0000524g0100 Nicotiana tabacum HOM05D006816 ORTHO05D008666 2.5e-105 386.7 377 62.6
EL10Ac6g13857 Beta vulgaris HOM05D006816 ORTHO05D008666 3.2e-105 386.3 427 55.7
Potri.010G047500 Populus trichocarpa HOM05D006816 ORTHO05D008666 7.2e-105 385.2 447 53.9
Lsat_1_v5_gn_4_4020 Lactuca sativa HOM05D006816 ORTHO05D008666 1.2e-104 384.4 400 55.2
Ah.02g130220 Amaranthus hybridus HOM05D006816 ORTHO05D008666 2.7e-104 383.3 443 52.6
HanXRQChr17g0569531 Helianthus annuus HOM05D006816 ORTHO05D008666 2.7e-104 383.3 373 59.8
Nitab4.5_0006963g0030 Nicotiana tabacum HOM05D006816 ORTHO05D008666 1.0e-103 381.3 408 59.1
Hund06034 Selenicereus undatus HOM05D006816 ORTHO05D008666 2.3e-103 380.2 419 53.5
BcaC08g46032 Brassica carinata HOM05D006816 ORTHO05D008666 1.1e-102 377.9 382 59.4
C06p38240 Brassica napus HOM05D006816 ORTHO05D008666 2.0e-102 377.1 380 59.7
MELO3C011940.2 Cucumis melo HOM05D006816 ORTHO05D008666 3.3e-102 376.3 455 52.7
ECA234G3219 Erigeron canadensis HOM05D006816 ORTHO05D008666 5.7e-102 375.6 363 59.2
BolC6t38923H Brassica oleracea HOM05D006816 ORTHO05D008666 9.7e-102 374.8 382 59.2
Aqoxy5G03738 Aquilegia oxysepala HOM05D006816 ORTHO05D008666 1.3e-101 374.4 360 57.2
Sopen05g008580 Solanum pennellii HOM05D006816 ORTHO05D008666 2.8e-101 373.2 408 55.9
PGSC0003DMG400018598 Solanum tuberosum HOM05D006816 ORTHO05D008666 2.8e-101 373.2 408 57.1
AT1G67840 Arabidopsis thaliana HOM05D006816 ORTHO05D008666 4.8e-101 372.5 438 53.9
CARHR060480 Cardamine hirsuta HOM05D006816 ORTHO05D008666 4.8e-101 372.5 406 56.2
FAN07G2231 Fragaria x ananassa HOM05D006816 ORTHO05D008666 4.8e-101 372.5 419 55.4
Prupe.1G246300 Prunus persica HOM05D006816 ORTHO05D008666 4.8e-101 372.5 438 51.6
Manes.13G022900 Manihot esculenta HOM05D006816 ORTHO05D008666 1.1e-100 371.3 425 54.8
Carub.0002s1430 Capsella rubella HOM05D006816 ORTHO05D008666 1.4e-100 370.9 398 56.5
Sed0004203 Sechium edule HOM05D006816 ORTHO05D008666 1.4e-100 370.9 406 54.4
BraA07t30858Z Brassica rapa HOM05D006816 ORTHO05D008666 4.1e-100 369.4 383 59.3
Solyc05g013670.3 Solanum lycopersicum HOM05D006816 ORTHO05D008666 4.1e-100 369.4 408 55.4
AL2G26590 Arabidopsis lyrata HOM05D006816 ORTHO05D008666 7.0e-100 368.6 377 58.4
ClCG05G025840 Citrullus lanatus HOM05D006816 ORTHO05D008666 9.1e-100 368.2 422 53.3
BcaB03g15378 Brassica carinata HOM05D006816 ORTHO05D008666 1.6e-99 367.5 383 59.3
Aa31sc755G30 Aethionema arabicum HOM05D006816 ORTHO05D008666 2.0e-99 367.1 380 60.0
A07p32350 Brassica napus HOM05D006816 ORTHO05D008666 2.6e-99 366.7 381 59.1
Thhalv10018280m.g Eutrema salsugineum HOM05D006816 ORTHO05D008666 2.6e-99 366.7 381 58.3
Duzib251G0886 Durio zibethinus HOM05D006816 ORTHO05D008666 1.3e-98 364.4 385 59.5
Oeu057544.1 Olea europaea HOM05D006816 ORTHO05D008666 1.3e-98 364.4 447 51.7
Sp5g22850 Schrenkiella parvula HOM05D006816 ORTHO05D008666 1.7e-98 364.0 381 58.0
Migut.K00611 Erythranthe guttata HOM05D006816 ORTHO05D008666 6.5e-98 362.1 372 57.8
THA.LOC104825556 Tarenaya hassleriana HOM05D006816 ORTHO05D008666 3.2e-97 359.8 366 56.6
vmacro01121 Vaccinium macrocarpon HOM05D006816 ORTHO05D008666 1.2e-96 357.8 442 51.4
SalBow2G0630 Salvia bowleyana HOM05D006816 ORTHO05D008666 3.0e-95 353.2 400 53.2
Peaxi162Scf00128g00318 Petunia axillaris HOM05D006816 ORTHO05D008666 3.1e-92 343.2 417 53.2
Cc11_g15850 Coffea canephora HOM05D006816 ORTHO05D008666 1.3e-90 337.8 376 55.6
ATR0824G245 Amborella trichopoda HOM05D006816 ORTHO05D008666 6.1e-88 328.9 431 47.8
unitig_699.g19932 Utricularia gibba HOM05D006816 ORTHO05D008666 7.5e-86 322.0 391 50.9
Os12g0292900 Oryza sativa ssp. japonica HOM05D006816 ORTHO05D008666 4.1e-84 316.2 379 50.1
AUR62005487 Chenopodium quinoa HOM05D006816 ORTHO05D008666 5.4e-84 315.8 455 45.9
Zm00001eb319330 Zea mays HOM05D006816 ORTHO05D008666 3.6e-80 303.1 431 48.5
Sc11g0000930 Simmondsia chinensis HOM05D006816 ORTHO05D008666 7.7e-75 285.4 301 55.5
CAN.G436.5 Capsicum annuum HOM05D006816 ORTHO05D008666 4.0e-71 273.1 304 54.9
SGA_v2.0_scaffold100G29566 Striga asiatica HOM05D006816 ORTHO05D008666 1.7e-69 267.7 340 47.6
CDE02G3152 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 9.5e-65 251.9 373 44.0
SEGI_18687 Sequoiadendron giganteum HOM05D006816 ORTHO05D008666 1.4e-63 248.1 375 40.5
MBI17_g43191_MAGBIO Magnolia biondii HOM05D006816 ORTHO05D008666 3.4e-62 243.4 284 52.8
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 1.4e-52 211.5 237 54.4
Psat3g153200 Pisum sativum HOM05D006816 ORTHO05D008666 7.3e-49 199.1 135 79.3
Mapoly0088s0066 Marchantia polymorpha HOM05D006816 ORTHO05D008666 2.1e-43 181.0 417 33.6
Psat2g121560 Pisum sativum HOM05D006816 ORTHO05D008666 1.6e-40 171.4 116 80.2
Psat4g077560 Pisum sativum HOM05D006816 ORTHO05D008666 3.8e-37 160.2 98 86.7
HPP92_023364 Vanilla planifolia HOM05D006816 ORTHO05D008666 3.3e-33 147.1 150 55.3
Pp3c11_24610 Physcomitrium patens HOM05D006816 ORTHO05D008666 1.3e-32 145.2 373 33.5
CBR_g52389 Chara braunii HOM05D006816 ORTHO05D008666 1.2e-30 138.7 341 31.4
HPP92_023363 Vanilla planifolia HOM05D006816 ORTHO05D008666 3.2e-28 130.6 131 53.4
COL.COLO4_35805 Corchorus olitorius HOM05D006816 ORTHO05D008666 3.3e-25 120.6 101 63.4
Glyma.08G131775 Glycine max HOM05D006816 ORTHO05D008666 5.8e-22 109.8 85 64.7
Actinidia08129 Actinidia chinensis HOM05D006816 ORTHO05D008666 2.3e-18 97.8 80 65.0
FvH4_4g35670 Fragaria vesca HOM05D006816 ORTHO05D008666 1.3e-13 82.0 89 50.6
FAN22G1065 Fragaria x ananassa HOM05D000247 ORTHO05D000288 2.7e-11 74.3 111 43.2
Atru.chr11.2546 Acer truncatum HOM05D006816 ORTHO05D008666 3.4e-06 57.4 72 48.6


User provided reference genes

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