Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.2H8IEQ Arachis hypogaea HOM05D003721 ORTHO05D004303 6.1e-26 120.2 66 100.0
arahy.Tifrunner.gnm1.ann1.B4ZXCR Arachis hypogaea HOM05D003721 ORTHO05D004303 4.4e-24 114.0 66 95.5
arahy.Tifrunner.gnm1.ann1.TR1UXP Arachis hypogaea HOM05D003721 ORTHO05D004303 7.5e-24 113.2 66 95.5
arahy.Tifrunner.gnm1.ann1.4H30G8 Arachis hypogaea HOM05D003721 ORTHO05D004303 2.8e-23 111.3 66 93.9
arahy.Tifrunner.gnm1.ann1.J8U9TP Arachis hypogaea HOM05D003721 ORTHO05D004303 2.4e-22 108.2 66 92.4
arahy.Tifrunner.gnm1.ann1.0WEA7F Arachis hypogaea HOM05D003721 ORTHO05D004303 3.1e-22 107.8 66 92.4
arahy.Tifrunner.gnm1.ann1.X01UQ7 Arachis hypogaea HOM05D003721 ORTHO05D004303 5.4e-22 107.1 66 90.9
arahy.Tifrunner.gnm1.ann1.EAH0NM Arachis hypogaea HOM05D003721 ORTHO05D004303 9.1e-22 106.3 66 87.9
arahy.Tifrunner.gnm1.ann1.BE33XR Arachis hypogaea HOM05D003721 ORTHO05D004303 4.5e-21 104.0 61 95.1
Glyma.18G239200 Glycine max HOM05D003721 ORTHO05D004303 2.6e-16 88.2 68 75.0
Psat3g105680 Pisum sativum HOM05D003721 ORTHO05D004303 1.3e-15 85.9 68 75.0
Glyma.09G253700 Glycine max HOM05D003721 ORTHO05D004303 2.8e-15 84.7 66 71.2
VMungo1383G3272 Vigna mungo HOM05D003721 ORTHO05D004303 2.8e-15 84.7 66 69.7
arahy.Tifrunner.gnm1.ann1.QXLJ4L Arachis hypogaea HOM05D003721 ORTHO05D004303 7.0e-14 80.1 67 70.1
Phvul.008G057500 Phaseolus vulgaris HOM05D003721 ORTHO05D004303 4.5e-13 77.4 66 65.2
arahy.Tifrunner.gnm1.ann1.M56506 Arachis hypogaea HOM05D003721 ORTHO05D004303 1.3e-12 75.9 64 68.8
Glyma.07G062500 Glycine max HOM05D003721 ORTHO05D004303 2.9e-12 74.7 66 66.7
Ca_07946_v3 Cicer arietinum L. HOM05D003721 ORTHO05D004303 3.9e-12 74.3 68 67.6
Glyma.16G030600 Glycine max HOM05D003721 ORTHO05D004303 4.3e-11 70.9 66 62.1
arahy.Tifrunner.gnm1.ann1.N4BQ9I Arachis hypogaea HOM05D003721 ORTHO05D004303 5.6e-11 70.5 43 83.7
Ca_03491_v3 Cicer arietinum L. HOM05D003721 ORTHO05D004303 7.3e-11 70.1 66 59.1
Medtr7g079200 Medicago truncatula HOM05D003721 ORTHO05D004303 7.3e-11 70.1 68 63.2
Lj1g0019249 Lotus japonicus HOM05D003721 ORTHO05D004303 1.6e-10 68.9 68 64.7
VMungo0331G1476 Vigna mungo HOM05D003721 ORTHO05D004303 1.8e-09 65.5 54 64.8
CSS0042065 Camellia sinensis var. sinensis HOM05D003721 ORTHO05D004303 5.2e-09 63.9 68 58.8
Phvul.010G105500 Phaseolus vulgaris HOM05D003721 ORTHO05D004303 5.2e-09 63.9 54 63.0
Duzib133G0509 Durio zibethinus HOM05D003721 ORTHO05D004303 2.0e-08 62.0 68 54.4
Lalb_Chr17g0338961 Lupinus albus HOM05D003721 ORTHO05D004303 2.6e-08 61.6 66 54.5
Dinv43871 Davidia involucrata HOM05D003721 ORTHO05D004303 4.4e-08 60.8 68 57.4
MD07G1130300 Malus domestica HOM05D003721 ORTHO05D004303 9.8e-08 59.7 66 53.0
Potri.002G165500 Populus trichocarpa HOM05D003721 ORTHO05D004303 2.2e-07 58.5 68 52.9
Ciclev10018933m.g Citrus clementina HOM05D003721 ORTHO05D004303 2.9e-07 58.2 68 50.0
TPR.G29569 Trifolium pratense HOM05D003721 ORTHO05D004303 2.9e-07 58.2 68 57.4
Cfa003861 Carpinus fangiana HOM05D003721 ORTHO05D004303 3.7e-07 57.8 65 55.4
Sabra02G0146000 Salix brachista HOM05D003721 ORTHO05D004303 3.7e-07 57.8 67 52.2
Dinv32529 Davidia involucrata HOM05D003721 ORTHO05D004303 6.4e-07 57.0 68 52.9
Sed0002636 Sechium edule HOM05D003721 ORTHO05D004303 8.3e-07 56.6 65 50.8
vmacro13221 Vaccinium macrocarpon HOM05D003721 ORTHO05D004303 8.3e-07 56.6 68 51.5
MD01G1072600 Malus domestica HOM05D003721 ORTHO05D004303 1.4e-06 55.8 66 50.0
Potri.014G091300 Populus trichocarpa HOM05D003721 ORTHO05D004303 1.4e-06 55.8 68 50.0
Haze_15575 Corylus avellana HOM05D003721 ORTHO05D004303 1.9e-06 55.5 66 51.5
Lalb_Chr04g0259331 Lupinus albus HOM05D003721 ORTHO05D004303 1.9e-06 55.5 66 51.5
Thecc.01G351200 Theobroma cacao HOM05D003721 ORTHO05D004303 1.9e-06 55.5 68 48.5
Atru.chr5.592 Acer truncatum HOM05D003721 ORTHO05D004303 2.4e-06 55.1 68 50.0
Haze_15580 Corylus avellana HOM05D003721 ORTHO05D004303 2.4e-06 55.1 66 51.5
QL04p055909 Quercus lobata HOM05D003721 ORTHO05D004303 2.4e-06 55.1 65 53.8
MELO3C021177.2 Cucumis melo HOM05D003721 ORTHO05D004303 3.2e-06 54.7 66 47.0
Gohir.D11G097866 Gossypium hirsutum HOM05D003721 ORTHO05D004303 4.1e-06 54.3 68 47.1
Gorai.007G104100 Gossypium raimondii HOM05D003721 ORTHO05D004303 4.1e-06 54.3 68 47.1
Manes.07G084500 Manihot esculenta HOM05D003721 ORTHO05D004303 4.1e-06 54.3 67 52.2
CSS0014201 Camellia sinensis var. sinensis HOM05D003721 ORTHO05D004303 5.4e-06 53.9 66 54.5
CSS0038344 Camellia sinensis var. sinensis HOM05D003721 ORTHO05D004303 5.4e-06 53.9 66 54.5
CsaV3_6G000920 Cucumis sativus L. HOM05D003721 ORTHO05D004303 5.4e-06 53.9 66 47.0
COL.COLO4_06374 Corchorus olitorius HOM05D003721 ORTHO05D004303 7.0e-06 53.5 68 50.0
Hma1.2p1_0623F.1_g191170 Hydrangea macrophylla HOM05D003721 ORTHO05D004303 7.0e-06 53.5 68 50.0
Rhsim07G0009400 Rhododendron simsii HOM05D003721 ORTHO05D004303 7.0e-06 53.5 68 52.9


User provided reference genes

Program Settings