Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.2H0UDK Arachis hypogaea HOM05D003942 ORTHO05D004527 1.6e-247 859.0 432 100.0
arahy.Tifrunner.gnm1.ann1.Q5YAPI Arachis hypogaea HOM05D003942 ORTHO05D004527 3.3e-245 851.3 432 98.8
Lalb_Chr04g0256871 Lupinus albus HOM05D003942 ORTHO05D004527 4.7e-159 565.1 367 78.2
Lj3g0006137 Lotus japonicus HOM05D003942 ORTHO05D004527 4.1e-155 552.0 432 67.6
VMungo0331G0006 Vigna mungo HOM05D003942 ORTHO05D004527 3.5e-154 548.9 437 67.7
Glyma.03G010800 Glycine max HOM05D003942 ORTHO05D004527 1.6e-151 540.0 443 65.5
Glyma.07G071900 Glycine max HOM05D003942 ORTHO05D004527 3.6e-151 538.9 428 68.0
Lalb_Chr03g0038211 Lupinus albus HOM05D003942 ORTHO05D004527 3.1e-150 535.8 422 68.0
Phvul.010G097300 Phaseolus vulgaris HOM05D003942 ORTHO05D004527 8.9e-150 534.3 441 65.8
Psat4g154400 Pisum sativum HOM05D003942 ORTHO05D004527 1.5e-149 533.5 437 65.7
Dinv32469 Davidia involucrata HOM05D003942 ORTHO05D004527 6.4e-148 528.1 435 65.3
Ca_23643_v3 Cicer arietinum L. HOM05D003942 ORTHO05D004527 8.3e-148 527.7 430 65.3
TAR629G1832 Trochodendron aralioides HOM05D003942 ORTHO05D004527 1.4e-147 526.9 417 65.7
Actinidia10022 Actinidia chinensis HOM05D003942 ORTHO05D004527 6.0e-146 521.5 423 64.1
QL08p049021 Quercus lobata HOM05D003942 ORTHO05D004527 1.0e-145 520.8 441 64.4
MBI18_g25515_MAGBIO Magnolia biondii HOM05D003942 ORTHO05D004527 5.1e-145 518.5 428 65.2
Cfa003938 Carpinus fangiana HOM05D003942 ORTHO05D004527 3.3e-144 515.8 429 65.7
CSS0049620 Camellia sinensis var. sinensis HOM05D003942 ORTHO05D004527 5.6e-144 515.0 419 64.2
CSS0041241 Camellia sinensis var. sinensis HOM05D003942 ORTHO05D004527 7.3e-144 514.6 419 64.2
Manes.05G036000 Manihot esculenta HOM05D003942 ORTHO05D004527 9.5e-144 514.2 392 67.6
TWI59G0555 Tripterygium wilfordii HOM05D003942 ORTHO05D004527 3.6e-143 512.3 429 62.9
CiPaw.01G059900 Carya illinoinensis HOM05D003942 ORTHO05D004527 1.4e-142 510.4 427 64.6
TAR375G0209 Trochodendron aralioides HOM05D003942 ORTHO05D004527 1.2e-141 507.3 422 62.8
TWI23G1005 Tripterygium wilfordii HOM05D003942 ORTHO05D004527 1.5e-141 506.9 432 62.7
Thecc.01G360500 Theobroma cacao HOM05D003942 ORTHO05D004527 2.0e-141 506.5 432 62.0
Rhsim07G0016400 Rhododendron simsii HOM05D003942 ORTHO05D004527 2.6e-141 506.1 373 68.4
Peaxi162Scf00191g01422 Petunia axillaris HOM05D003942 ORTHO05D004527 4.4e-141 505.4 436 62.2
Potri.014G082900 Populus trichocarpa HOM05D003942 ORTHO05D004527 1.3e-140 503.8 425 61.9
TPR.G15979 Trifolium pratense HOM05D003942 ORTHO05D004527 3.7e-140 502.3 353 73.1
Gohir.A11G088200 Gossypium hirsutum HOM05D003942 ORTHO05D004527 1.4e-139 500.4 437 61.8
Atru.chr5.464 Acer truncatum HOM05D003942 ORTHO05D004527 1.9e-139 500.0 407 63.1
CAN.G399.13 Capsicum annuum HOM05D003942 ORTHO05D004527 1.9e-139 500.0 405 65.2
CANSAT56G2580 Cannabis sativa HOM05D003942 ORTHO05D004527 3.2e-139 499.2 429 62.7
Gorai.007G098800 Gossypium raimondii HOM05D003942 ORTHO05D004527 4.1e-139 498.8 437 61.6
PGR042G2566 Punica granatum HOM05D003942 ORTHO05D004527 5.4e-139 498.4 423 63.4
Cpa.g.sc18.243 Carica papaya HOM05D003942 ORTHO05D004527 9.2e-139 497.7 399 64.2
Medtr8g031000 Medicago truncatula HOM05D003942 ORTHO05D004527 9.2e-139 497.7 355 72.1
COL.COLO4_12700 Corchorus olitorius HOM05D003942 ORTHO05D004527 2.1e-138 496.5 373 67.3
Duzib133G0298 Durio zibethinus HOM05D003942 ORTHO05D004527 2.1e-138 496.5 422 61.8
SalBow5G2271 Salvia bowleyana HOM05D003942 ORTHO05D004527 2.7e-138 496.1 398 63.8
GSVIVG01026895001 Vitis vinifera HOM05D003942 ORTHO05D004527 3.5e-138 495.7 352 71.0
CiPaw.02G030000 Carya illinoinensis HOM05D003942 ORTHO05D004527 4.6e-138 495.4 375 67.7
Ciclev10020374m.g Citrus clementina HOM05D003942 ORTHO05D004527 4.6e-138 495.4 425 61.6
Sabra14G0060100 Salix brachista HOM05D003942 ORTHO05D004527 4.6e-138 495.4 425 60.5
Nitab4.5_0001702g0090 Nicotiana tabacum HOM05D003942 ORTHO05D004527 1.0e-137 494.2 427 63.5
Cc02_g37870 Coffea canephora HOM05D003942 ORTHO05D004527 2.3e-137 493.0 383 65.5
THA.LOC104817290 Tarenaya hassleriana HOM05D003942 ORTHO05D004527 2.3e-137 493.0 404 64.1
Nitab4.5_0008050g0040 Nicotiana tabacum HOM05D003942 ORTHO05D004527 5.1e-137 491.9 426 62.4
Solyc05g049900.3 Solanum lycopersicum HOM05D003942 ORTHO05D004527 5.1e-137 491.9 440 61.1
MD07G1139000 Malus domestica HOM05D003942 ORTHO05D004527 8.6e-137 491.1 392 64.5
PGSC0003DMG400021644 Solanum tuberosum HOM05D003942 ORTHO05D004527 1.9e-136 490.0 440 60.9
Sopen05g028240 Solanum pennellii HOM05D003942 ORTHO05D004527 5.6e-136 488.4 434 60.6
MD01G1057600 Malus domestica HOM05D003942 ORTHO05D004527 9.5e-136 487.6 379 64.9
RcHm_v2.0_Chr1g0355071 Rosa chinensis HOM05D003942 ORTHO05D004527 9.5e-136 487.6 403 62.5
CDE09G0298 Ceratophyllum demersum HOM05D003942 ORTHO05D004527 1.2e-135 487.3 370 66.2
MSTRG.4859 Avicennia marina HOM05D003942 ORTHO05D004527 1.4e-134 483.8 424 60.4
Prupe.2G168100 Prunus persica HOM05D003942 ORTHO05D004527 8.9e-134 481.1 417 60.7
Aqoxy5G04009 Aquilegia oxysepala HOM05D003942 ORTHO05D004527 4.4e-133 478.8 434 61.1
Eucgr.E00157 Eucalyptus grandis HOM05D003942 ORTHO05D004527 4.4e-133 478.8 419 61.8
FAN01G0250 Fragaria x ananassa HOM05D003942 ORTHO05D004527 5.8e-133 478.4 403 61.8
FAN03G2475 Fragaria x ananassa HOM05D003942 ORTHO05D004527 5.8e-133 478.4 403 61.8
SGA_v2.0_scaffold43G16422 Striga asiatica HOM05D003942 ORTHO05D004527 7.6e-133 478.0 427 59.3
FvH4_7g14170 Fragaria vesca HOM05D003942 ORTHO05D004527 2.2e-132 476.5 403 61.0
Migut.N01440 Erythranthe guttata HOM05D003942 ORTHO05D004527 4.9e-132 475.3 429 57.1
FAN06G2309 Fragaria x ananassa HOM05D003942 ORTHO05D004527 4.9e-132 475.3 403 60.8
FAN10G4090 Fragaria x ananassa HOM05D003942 ORTHO05D004527 4.9e-132 475.3 403 61.3
FAN06G3470 Fragaria x ananassa HOM05D003942 ORTHO05D004527 4.2e-131 472.2 403 60.8
AUR62004344 Chenopodium quinoa HOM05D003942 ORTHO05D004527 5.4e-131 471.9 386 62.4
AUR62022550 Chenopodium quinoa HOM05D003942 ORTHO05D004527 7.1e-131 471.5 382 63.4
Lj9A582T85 Lonicera japonica HOM05D003942 ORTHO05D004527 1.2e-130 470.7 446 56.1
Oeu020562.1 Olea europaea HOM05D003942 ORTHO05D004527 6.0e-130 468.4 351 67.5
Aa31LG10G15570 Aethionema arabicum HOM05D003942 ORTHO05D004527 1.3e-129 467.2 385 62.9
Hund27285 Selenicereus undatus HOM05D003942 ORTHO05D004527 1.3e-129 467.2 417 59.5
Lsat_1_v5_gn_3_137060 Lactuca sativa HOM05D003942 ORTHO05D004527 3.9e-129 465.7 405 60.7
BolC4t24688H Brassica oleracea HOM05D003942 ORTHO05D004527 8.7e-129 464.5 379 61.7
BcaC07g40631 Brassica carinata HOM05D003942 ORTHO05D004527 1.1e-128 464.2 422 56.6
A04p01160 Brassica napus HOM05D003942 ORTHO05D004527 1.9e-128 463.4 371 62.0
BraA04t15833Z Brassica rapa HOM05D003942 ORTHO05D004527 1.9e-128 463.4 371 62.0
C04p31390 Brassica napus HOM05D003942 ORTHO05D004527 4.3e-128 462.2 371 62.0
Haze_15488 Corylus avellana HOM05D003942 ORTHO05D004527 5.6e-128 461.8 429 60.6
AL5G43590 Arabidopsis lyrata HOM05D003942 ORTHO05D004527 7.3e-128 461.5 415 58.3
HanXRQChr16g0522811 Helianthus annuus HOM05D003942 ORTHO05D004527 1.3e-127 460.7 406 59.6
Carub.0005s2799 Capsella rubella HOM05D003942 ORTHO05D004527 1.6e-127 460.3 363 63.4
BcaC02g07065 Brassica carinata HOM05D003942 ORTHO05D004527 3.6e-127 459.1 404 59.9
BraA09t40766Z Brassica rapa HOM05D003942 ORTHO05D004527 3.6e-127 459.1 424 57.8
DCAR_015969 Daucus carota HOM05D003942 ORTHO05D004527 6.2e-127 458.4 419 58.9
Sp5g02060 Schrenkiella parvula HOM05D003942 ORTHO05D004527 6.2e-127 458.4 415 57.6
Thhalv10006010m.g Eutrema salsugineum HOM05D003942 ORTHO05D004527 8.1e-127 458.0 377 61.8
A09p53400 Brassica napus HOM05D003942 ORTHO05D004527 1.8e-126 456.8 433 56.8
BolC8t51203H Brassica oleracea HOM05D003942 ORTHO05D004527 1.8e-126 456.8 385 61.3
HanXRQChr13g0426521 Helianthus annuus HOM05D003942 ORTHO05D004527 4.0e-126 455.7 401 59.6
Ah.05g180690 Amaranthus hybridus HOM05D003942 ORTHO05D004527 5.3e-126 455.3 415 57.6
C08p36210 Brassica napus HOM05D003942 ORTHO05D004527 5.3e-126 455.3 385 61.0
BraA04t18872Z Brassica rapa HOM05D003942 ORTHO05D004527 2.0e-125 453.4 431 56.4
Lsat_1_v5_gn_4_36221 Lactuca sativa HOM05D003942 ORTHO05D004527 2.6e-125 453.0 375 62.4
CARHR141140 Cardamine hirsuta HOM05D003942 ORTHO05D004527 3.4e-125 452.6 426 58.2
C04p71910 Brassica napus HOM05D003942 ORTHO05D004527 4.4e-125 452.2 430 56.7
AL4G45080 Arabidopsis lyrata HOM05D003942 ORTHO05D004527 5.8e-125 451.8 426 56.6
BolC4t28689H Brassica oleracea HOM05D003942 ORTHO05D004527 7.6e-125 451.4 430 56.5
Thhalv10001467m.g Eutrema salsugineum HOM05D003942 ORTHO05D004527 2.9e-124 449.5 427 56.9
A04p34110 Brassica napus HOM05D003942 ORTHO05D004527 8.4e-124 448.0 431 56.1
Aa31LG1G27300 Aethionema arabicum HOM05D003942 ORTHO05D004527 1.1e-123 447.6 403 59.3
Sp4g27940 Schrenkiella parvula HOM05D003942 ORTHO05D004527 2.4e-123 446.4 418 57.4
Carub.0004s2857 Capsella rubella HOM05D003942 ORTHO05D004527 2.1e-122 443.4 403 58.3
ECA240G2096 Erigeron canadensis HOM05D003942 ORTHO05D004527 2.1e-122 443.4 354 64.7
BcaC02g10219 Brassica carinata HOM05D003942 ORTHO05D004527 3.5e-122 442.6 371 61.5
BcaC09g52244 Brassica carinata HOM05D003942 ORTHO05D004527 3.5e-122 442.6 399 57.4
Os03g0106000 Oryza sativa ssp. japonica HOM05D003942 ORTHO05D004527 1.3e-119 434.1 386 59.6
unitig_8.g3394 Utricularia gibba HOM05D003942 ORTHO05D004527 9.0e-118 427.9 423 54.1
Sc23g0002980 Simmondsia chinensis HOM05D003942 ORTHO05D004527 9.9e-117 424.5 322 67.1
Zm00001eb000510 Zea mays HOM05D003942 ORTHO05D004527 2.2e-116 423.3 393 57.8
AT2G45870 Arabidopsis thaliana HOM05D003942 ORTHO05D004527 1.6e-111 407.1 337 62.3
EL10Ac1g00428 Beta vulgaris HOM05D003942 ORTHO05D004527 3.7e-111 406.0 322 63.4
HPP92_006558 Vanilla planifolia HOM05D003942 ORTHO05D004527 4.0e-110 402.5 377 56.2
SEGI_35716 Sequoiadendron giganteum HOM05D003942 ORTHO05D004527 2.3e-105 386.7 340 57.1
SEGI_25793 Sequoiadendron giganteum HOM05D003942 ORTHO05D004527 1.9e-104 383.6 345 55.7
Pp3c3_22870 Physcomitrium patens HOM05D003942 ORTHO05D004527 5.3e-102 375.6 344 55.2
ECA234G1137 Erigeron canadensis HOM05D003942 ORTHO05D004527 1.2e-101 374.4 313 62.9
Pp3c4_15850 Physcomitrium patens HOM05D003942 ORTHO05D004527 1.7e-100 370.5 342 54.1
Mapoly0071s0037 Marchantia polymorpha HOM05D003942 ORTHO05D004527 4.2e-99 365.9 340 54.1
Nn1g01512 Nelumbo nucifera HOM05D003942 ORTHO05D004527 2.5e-96 356.7 416 51.0
Duzib138G1448 Durio zibethinus HOM05D003942 ORTHO05D004527 1.4e-91 340.9 424 48.1
SMO364G0338 Selaginella moellendorffii HOM05D003942 ORTHO05D004527 2.5e-88 330.1 326 50.6
vmacro13277 Vaccinium macrocarpon HOM05D003942 ORTHO05D004527 8.5e-84 315.1 446 43.5
Gohir.D11G092500 Gossypium hirsutum HOM05D003942 ORTHO05D004527 2.1e-82 310.5 288 59.0
AT3G61320 Arabidopsis thaliana HOM05D003942 ORTHO05D004527 1.0e-76 291.6 286 54.5
ATR0680G085 Amborella trichopoda HOM05D003942 ORTHO05D004527 3.7e-71 273.1 353 45.6
Mapoly0009s0131 Marchantia polymorpha HOM05D003942 ORTHO05D004527 7.0e-70 268.9 355 40.6
AagrBONN_evm.TU.Sc2ySwM_344.3805 Anthoceros agrestis HOM05D003942 ORTHO05D004527 1.6e-69 267.7 342 43.9
Pp3c2_13700 Physcomitrium patens HOM05D003942 ORTHO05D004527 3.8e-68 263.1 344 43.3
AagrBONN_evm.TU.Sc2ySwM_228.958 Anthoceros agrestis HOM05D003942 ORTHO05D004527 2.5e-67 260.4 328 43.6
AagrBONN_evm.TU.Sc2ySwM_362.1957 Anthoceros agrestis HOM05D003942 ORTHO05D004527 7.2e-67 258.8 303 44.9
Pp3c1_34600 Physcomitrium patens HOM05D003942 ORTHO05D004527 7.7e-61 238.8 333 39.6
Pp3c1_34560 Physcomitrium patens HOM05D003942 ORTHO05D004527 1.7e-60 237.7 299 42.8
Pp3c1_3670 Physcomitrium patens HOM05D003942 ORTHO05D004527 1.7e-60 237.7 294 42.5
MD01G1202300 Malus domestica HOM05D003942 ORTHO05D004527 2.2e-60 237.3 262 50.8
CBR_g44610 Chara braunii HOM05D000505 ORTHO05D000301 8.5e-60 235.3 351 37.0
HPP92_011356 Vanilla planifolia HOM05D003942 ORTHO05D004527 3.2e-59 233.4 200 58.0
Pp3c11_9440 Physcomitrium patens HOM05D003942 ORTHO05D004527 2.7e-58 230.3 305 38.7
FAN10G2852 Fragaria x ananassa HOM05D003942 ORTHO05D004527 4.7e-58 229.6 200 62.0
Pp3c6_24250 Physcomitrium patens HOM05D003942 ORTHO05D004527 4.0e-57 226.5 302 40.1
Oeu020563.1 Olea europaea HOM05D003942 ORTHO05D004527 7.7e-53 212.2 155 72.3
CARHR171630 Cardamine hirsuta HOM05D003942 ORTHO05D004527 1.3e-52 211.5 185 61.1
Pp3c14_6660 Physcomitrium patens HOM05D003942 ORTHO05D004527 3.6e-50 203.4 292 38.0
CBR_g772 Chara braunii HOM05D003942 ORTHO05D004527 2.3e-49 200.7 374 35.0
C05p09980 Brassica napus HOM05D003942 ORTHO05D004527 8.3e-47 192.2 200 55.0
AagrBONN_evm.TU.Sc2ySwM_228.2628 Anthoceros agrestis HOM05D003942 ORTHO05D004527 2.3e-44 184.1 164 50.6
SEGI_34263 Sequoiadendron giganteum HOM05D003942 ORTHO05D004527 5.0e-44 183.0 159 60.4
Cre06.g277650 Chlamydomonas reinhardtii HOM05D003942 ORTHO05D004527 3.4e-40 170.2 309 34.6
CBR_g38187 Chara braunii HOM05D003942 ORTHO05D004527 2.2e-39 167.5 218 42.2
HPP92_011355 Vanilla planifolia HOM05D003942 ORTHO05D004527 2.2e-39 167.5 146 61.0
Cre11.g474700 Chlamydomonas reinhardtii HOM05D003942 ORTHO05D004527 2.4e-38 164.1 333 33.3
Cre06.g261750 Chlamydomonas reinhardtii HOM05D003942 ORTHO05D004527 3.2e-38 163.7 321 31.5
Cre16.g663450 Chlamydomonas reinhardtii HOM05D003942 ORTHO05D004527 7.0e-38 162.5 315 34.0
FAN10G0144 Fragaria x ananassa HOM05D003942 ORTHO05D004527 4.6e-37 159.8 135 65.2
Cre16.g663400 Chlamydomonas reinhardtii HOM05D003942 ORTHO05D004527 1.3e-36 158.3 315 33.0
Cre16.g662600 Chlamydomonas reinhardtii HOM05D003942 ORTHO05D004527 1.7e-36 157.9 315 33.3
PRCOL_00004040 Prasinoderma coloniale HOM05D003942 ORTHO05D004527 3.2e-30 137.1 298 33.2
Cre01.g038100 Chlamydomonas reinhardtii HOM05D003942 ORTHO05D004527 2.1e-29 134.4 320 28.4
Cre07.g355300 Chlamydomonas reinhardtii HOM05D003942 ORTHO05D004527 3.5e-29 133.7 324 29.0
MCO01G232 Micromonas commoda HOM05D003942 ORTHO05D004527 6.2e-26 122.9 309 29.4
Pp3c11_6680 Physcomitrium patens HOM05D003942 ORTHO05D004527 5.2e-25 119.8 86 60.5
FAN10G3156 Fragaria x ananassa HOM05D000449 ORTHO05D004527 1.5e-24 118.2 80 73.8
BcaB02g11262 Brassica carinata HOM05D003942 ORTHO05D004527 2.6e-24 117.5 130 46.9
SEGI_01331 Sequoiadendron giganteum HOM05D003942 ORTHO05D004527 7.6e-24 115.9 76 68.4
PRCOL_00006054 Prasinoderma coloniale HOM05D003942 ORTHO05D004527 2.2e-23 114.4 326 30.1
PRCOL_00003097 Prasinoderma coloniale HOM05D003942 ORTHO05D004527 1.1e-22 112.1 307 29.6
Cre03.g199600 Chlamydomonas reinhardtii HOM05D003942 ORTHO05D004527 5.4e-22 109.8 230 29.1
Oeu020564.1 Olea europaea HOM05D003942 ORTHO05D004527 5.4e-22 109.8 78 71.8
Pp3c6_17920 Physcomitrium patens HOM05D003942 ORTHO05D004527 5.4e-22 109.8 168 35.7
PRCOL_00005764 Prasinoderma coloniale HOM05D003942 ORTHO05D004527 1.7e-20 104.8 326 28.2
PRCOL_00003548 Prasinoderma coloniale HOM05D003942 ORTHO05D004527 9.6e-19 99.0 324 28.4
PRCOL_00004398 Prasinoderma coloniale HOM05D003942 ORTHO05D004527 3.6e-18 97.1 319 27.9
MCO09G357 Micromonas commoda HOM05D003942 ORTHO05D004527 1.1e-17 95.5 351 26.2
MCO01G007 Micromonas commoda HOM05D003942 ORTHO05D004527 4.2e-14 83.6 310 25.8
PSO478G4509 Papaver somniferum HOM05D003942 ORTHO05D004527 1.4e-09 68.6 61 59.0
Pp3c3_14710 Physcomitrium patens HOM05D003942 ORTHO05D004527 3.4e-08 63.9 139 31.7
Pp3c20_3390 Physcomitrium patens HOM05D003942 ORTHO05D004527 2.2e-07 61.2 132 37.1
PRCOL_00005847 Prasinoderma coloniale HOM05D047694 ORTHO05D049123 7.1e-06 56.2 262 22.5


User provided reference genes

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