Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.26E61A Arachis hypogaea HOM05D007507 ORTHO05D009420 3.2e-72 275.0 143 100.0
arahy.Tifrunner.gnm1.ann1.XNU6AG Arachis hypogaea HOM05D007507 ORTHO05D009420 1.0e-70 270.0 142 98.6
Lalb_Chr20g0121601 Lupinus albus HOM05D007507 ORTHO05D009420 1.2e-37 160.2 142 67.6
Glyma.07G201000 Glycine max HOM05D007507 ORTHO05D009420 2.8e-36 155.6 145 64.1
Phvul.002G232000 Phaseolus vulgaris HOM05D007507 ORTHO05D009420 1.4e-35 153.3 139 65.5
Lj4g0010126 Lotus japonicus HOM05D007507 ORTHO05D009420 1.8e-35 152.9 145 62.1
TPR.G39426 Trifolium pratense HOM05D007507 ORTHO05D009420 5.4e-35 151.4 142 59.9
Glyma.15G077500 Glycine max HOM05D007507 ORTHO05D009420 1.2e-34 150.2 128 67.2
VMungo0251G0526 Vigna mungo HOM05D007507 ORTHO05D009420 1.2e-34 150.2 140 62.9
Glyma.13G175400 Glycine max HOM05D007507 ORTHO05D009420 2.7e-34 149.1 144 62.5
Phvul.006G182800 Phaseolus vulgaris HOM05D007507 ORTHO05D009420 4.5e-34 148.3 128 68.8
Glyma.13G236200 Glycine max HOM05D007507 ORTHO05D009420 1.0e-33 147.1 129 66.7
Medtr2g014380 Medicago truncatula HOM05D007507 ORTHO05D009420 1.0e-33 147.1 142 59.2
TPR.G19926 Trifolium pratense HOM05D007507 ORTHO05D009420 2.1e-31 139.4 142 60.6
arahy.Tifrunner.gnm1.ann1.UCBT0G Arachis hypogaea HOM05D007507 ORTHO05D009420 6.8e-30 134.4 145 57.9
Psat7g115600 Pisum sativum HOM05D007507 ORTHO05D009420 6.8e-30 134.4 144 57.6
VMungo0540G0304 Vigna mungo HOM05D007507 ORTHO05D009420 6.8e-30 134.4 128 63.3
arahy.Tifrunner.gnm1.ann1.IERL18 Arachis hypogaea HOM05D007507 ORTHO05D009420 1.5e-29 133.3 145 57.9
QL05p042078 Quercus lobata HOM05D007507 ORTHO05D009420 1.3e-28 130.2 130 54.6
Duzib235G0685 Durio zibethinus HOM05D007507 ORTHO05D009420 1.4e-27 126.7 143 53.8
Medtr4g088390 Medicago truncatula HOM05D007507 ORTHO05D009420 1.8e-27 126.3 141 56.0
MD10G1289800 Malus domestica HOM05D007507 ORTHO05D009420 4.6e-26 121.7 130 55.4
MD05G1310700 Malus domestica HOM05D007507 ORTHO05D009420 7.8e-26 120.9 142 54.9
Prupe.4G051900 Prunus persica HOM05D007507 ORTHO05D009420 3.0e-25 119.0 136 53.7
Gohir.A05G159400 Gossypium hirsutum HOM05D007507 ORTHO05D009420 1.9e-24 116.3 139 53.2
Thecc.06G181600 Theobroma cacao HOM05D007507 ORTHO05D009420 1.9e-24 116.3 143 49.0
TAR626G1744 Trochodendron aralioides HOM05D007507 ORTHO05D009420 7.3e-24 114.4 124 52.4
GSVIVG01021107001 Vitis vinifera HOM05D007507 ORTHO05D009420 7.3e-24 114.4 139 52.5
Gohir.D05G162100 Gossypium hirsutum HOM05D007507 ORTHO05D009420 1.2e-23 113.6 147 51.0
CSS0001598 Camellia sinensis var. sinensis HOM05D007507 ORTHO05D009420 1.6e-23 113.2 136 49.3
CiPaw.10G052300 Carya illinoinensis HOM05D007507 ORTHO05D009420 1.6e-23 113.2 141 51.1
Gorai.009G167100 Gossypium raimondii HOM05D007507 ORTHO05D009420 2.1e-23 112.8 135 52.6
Duzib192G0611 Durio zibethinus HOM05D007507 ORTHO05D009420 3.6e-23 112.1 143 49.0
FAN21G1585 Fragaria x ananassa HOM05D007507 ORTHO05D009420 4.7e-23 111.7 143 49.0
RcHm_v2.0_Chr5g0009091 Rosa chinensis HOM05D007507 ORTHO05D009420 3.1e-22 109.0 143 48.3
Ciclev10016932m.g Citrus clementina HOM05D007507 ORTHO05D009420 6.8e-22 107.8 148 47.3
Cpa.g.sc27.9 Carica papaya HOM05D007507 ORTHO05D009420 8.9e-22 107.5 132 47.0
Gohir.A09G073500 Gossypium hirsutum HOM05D007507 ORTHO05D009420 2.0e-21 106.3 146 47.3
FvH4_3g08680 Fragaria vesca HOM05D007507 ORTHO05D009420 2.6e-21 105.9 143 46.9
Gohir.D09G073200 Gossypium hirsutum HOM05D007507 ORTHO05D009420 2.6e-21 105.9 146 47.3
Gorai.006G088200 Gossypium raimondii HOM05D007507 ORTHO05D009420 2.6e-21 105.9 146 47.3
Dinv17350 Davidia involucrata HOM05D007507 ORTHO05D009420 5.8e-21 104.8 137 47.4
Dinv40597 Davidia involucrata HOM05D007507 ORTHO05D009420 7.5e-21 104.4 142 47.9
Eucgr.E03247 Eucalyptus grandis HOM05D007507 ORTHO05D009420 2.2e-20 102.8 142 45.1
FAN11G0818 Fragaria x ananassa HOM05D007507 ORTHO05D009420 2.9e-20 102.4 144 47.2
TWI38G1903 Tripterygium wilfordii HOM05D007507 ORTHO05D009420 3.7e-20 102.1 143 47.6
Potri.011G057400 Populus trichocarpa HOM05D007507 ORTHO05D009420 4.9e-20 101.7 147 47.6
CANSAT35G2017 Cannabis sativa HOM05D007507 ORTHO05D009420 6.4e-20 101.3 130 51.5
DCAR_004049 Daucus carota HOM05D007507 ORTHO05D009420 7.0e-19 97.8 119 51.3
Potri.004G048201 Populus trichocarpa HOM05D007507 ORTHO05D009420 9.2e-19 97.4 147 45.6
Nn1g04226 Nelumbo nucifera HOM05D007507 ORTHO05D009420 1.2e-18 97.1 120 48.3
Actinidia05654 Actinidia chinensis HOM05D007507 ORTHO05D009420 2.7e-18 95.9 124 46.0
Actinidia16570 Actinidia chinensis HOM05D007507 ORTHO05D009420 3.5e-18 95.5 125 45.6
Sabra11G0039300 Salix brachista HOM05D007507 ORTHO05D009420 3.0e-17 92.4 145 46.2
Gorai.010G158100 Gossypium raimondii HOM05D007507 ORTHO05D009420 6.6e-17 91.3 150 43.3
Manes.16G031300 Manihot esculenta HOM05D007507 ORTHO05D009420 8.6e-17 90.9 132 44.7
Sabra04G0030100 Salix brachista HOM05D007507 ORTHO05D009420 1.1e-16 90.5 134 44.8
Migut.H01473 Erythranthe guttata HOM05D007507 ORTHO05D009420 3.3e-16 89.0 139 39.6
PGSC0003DMG400031763 Solanum tuberosum HOM05D007507 ORTHO05D009420 3.3e-16 89.0 130 43.1
Gohir.D06G135900 Gossypium hirsutum HOM05D007507 ORTHO05D009420 4.3e-16 88.6 150 43.3
Cc02_g13780 Coffea canephora HOM05D007507 ORTHO05D009420 1.2e-15 87.0 135 40.0
Lsat_1_v5_gn_7_22681 Lactuca sativa HOM05D007507 ORTHO05D009420 2.1e-15 86.3 124 42.7
PSO675G6999 Papaver somniferum HOM05D007507 ORTHO05D009420 2.8e-15 85.9 124 43.5
MSTRG.14710 Avicennia marina HOM05D007507 ORTHO05D009420 4.7e-15 85.1 130 42.3
Manes.17G048900 Manihot esculenta HOM05D007507 ORTHO05D009420 6.2e-15 84.7 136 41.9
Atru.chr10.1803 Acer truncatum HOM05D007507 ORTHO05D009420 1.8e-14 83.2 132 40.9
HanXRQChr04g0113131 Helianthus annuus HOM05D007507 ORTHO05D009420 2.3e-14 82.8 125 41.6
MBI07_g29118_MAGBIO Magnolia biondii HOM05D007507 ORTHO05D009420 3.1e-14 82.4 137 41.6
PGR042G2392 Punica granatum HOM05D007507 ORTHO05D009420 5.2e-14 81.6 133 43.6
Aqoxy4G00641 Aquilegia oxysepala HOM05D007507 ORTHO05D009420 6.8e-14 81.3 129 42.6
Sopen02g022610 Solanum pennellii HOM05D007507 ORTHO05D009420 8.9e-14 80.9 134 40.3
Solyc02g077720.4 Solanum lycopersicum HOM05D007507 ORTHO05D009420 2.6e-13 79.3 134 40.3
Hma1.2p1_0558F.1_g178550 Hydrangea macrophylla HOM05D007507 ORTHO05D009420 4.4e-13 78.6 108 47.2
Haze_06387 Corylus avellana HOM05D007507 ORTHO05D009420 7.5e-13 77.8 142 38.0
Atru.chr10.1804 Acer truncatum HOM05D007507 ORTHO05D009420 9.9e-13 77.4 138 39.9
Nitab4.5_0007893g0030 Nicotiana tabacum HOM05D007507 ORTHO05D009420 8.3e-12 74.3 126 39.7
Oeu015676.1 Olea europaea HOM05D007507 ORTHO05D009420 4.1e-11 72.0 117 41.9
Sed0011593 Sechium edule HOM05D007507 ORTHO05D009420 5.4e-11 71.6 114 41.2
Nitab4.5_0002813g0060 Nicotiana tabacum HOM05D007507 ORTHO05D009420 7.1e-11 71.2 120 40.0
PSO541G3558 Papaver somniferum HOM05D007507 ORTHO05D009420 7.1e-11 71.2 85 50.6
ClCG01G023220 Citrullus lanatus HOM05D007507 ORTHO05D009420 9.2e-11 70.9 133 39.1
ECA236G3296 Erigeron canadensis HOM05D007507 ORTHO05D009420 1.6e-10 70.1 66 65.2
Psat1g203160 Pisum sativum HOM05D007507 ORTHO05D009420 3.5e-10 68.9 97 48.5
CsaV3_6G050370 Cucumis sativus L. HOM05D007507 ORTHO05D009420 7.8e-10 67.8 141 36.9
DCAR_008007 Daucus carota HOM05D007507 ORTHO05D009420 1.0e-09 67.4 123 40.7
arahy.Tifrunner.gnm1.ann1.PE4GJ8 Arachis hypogaea HOM05D000372 ORTHO05D009420 1.1e-08 63.9 57 64.9
SalBow8G4682 Salvia bowleyana HOM05D007507 ORTHO05D009420 1.1e-08 63.9 134 38.8
Oeu064800.1 Olea europaea HOM05D007507 ORTHO05D009420 1.5e-08 63.5 121 38.8
SEGI_17757 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 2.5e-08 62.8 66 51.5
SEGI_35508 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 3.3e-08 62.4 90 44.4
Oeu027697.1 Olea europaea HOM05D007507 ORTHO05D009420 4.3e-08 62.0 121 38.0
Hund21209 Selenicereus undatus HOM05D007507 ORTHO05D009420 1.2e-07 60.5 67 50.7
Sabra09G0021000 Salix brachista HOM05D003527 ORTHO05D004099 1.4e-06 57.0 93 39.8
SalBow8G0489 Salvia bowleyana HOM05D007507 ORTHO05D009420 1.4e-06 57.0 69 53.6
Duzib093G1072 Durio zibethinus HOM05D003527 ORTHO05D004099 1.8e-06 56.6 66 51.5
PSO339G4025 Papaver somniferum HOM05D003527 ORTHO05D004099 1.8e-06 56.6 93 41.9
PSO384G3887 Papaver somniferum HOM05D003527 ORTHO05D004099 1.8e-06 56.6 93 41.9
SEGI_36970 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 2.4e-06 56.2 93 41.9
Nn2g10383 Nelumbo nucifera HOM05D003527 ORTHO05D004099 3.1e-06 55.8 68 48.5
VMungo1383G0208 Vigna mungo HOM05D003527 ORTHO05D004099 3.1e-06 55.8 68 50.0
Ciclev10012740m.g Citrus clementina HOM05D003527 ORTHO05D004099 5.2e-06 55.1 68 48.5
Phvul.008G099800 Phaseolus vulgaris HOM05D003527 ORTHO05D004099 6.8e-06 54.7 68 50.0
TAR636G1653 Trochodendron aralioides HOM05D003527 ORTHO05D004099 6.8e-06 54.7 68 48.5
MELO3C007264.2 Cucumis melo HOM05D007507 ORTHO05D009420 8.9e-06 54.3 94 41.5
MBI14_g37823_MAGBIO Magnolia biondii HOM05D003527 ORTHO05D004099 8.9e-06 54.3 66 50.0
Thecc.05G040900 Theobroma cacao HOM05D003527 ORTHO05D004099 8.9e-06 54.3 68 47.1


User provided reference genes

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