Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.20TFSQ Arachis hypogaea HOM05D008037 ORTHO05D004271 2.0e-82 308.9 143 100.0
arahy.Tifrunner.gnm1.ann1.P2FSG5 Arachis hypogaea HOM05D008037 ORTHO05D004271 2.0e-82 308.9 143 100.0
arahy.Tifrunner.gnm1.ann1.ASR258 Arachis hypogaea HOM05D008037 ORTHO05D004271 8.5e-73 276.9 143 93.7
arahy.Tifrunner.gnm1.ann1.LBLK2X Arachis hypogaea HOM05D008037 ORTHO05D004271 1.2e-63 246.5 143 82.5
MBI08_g48225_MAGBIO Magnolia biondii HOM05D008037 ORTHO05D004271 5.9e-58 227.6 116 93.1
Medtr4g006040 Medicago truncatula HOM05D008037 ORTHO05D009823 7.2e-56 220.7 123 87.0
arahy.Tifrunner.gnm1.ann1.WFJR7S Arachis hypogaea HOM05D008037 ORTHO05D004271 3.8e-49 198.4 143 72.0
Nitab4.5_0001727g0130 Nicotiana tabacum HOM05D008037 ORTHO05D004271 3.1e-43 178.7 94 89.4
SHI36397 Sapria himalayana HOM05D008037 ORTHO05D004271 3.5e-42 175.3 143 67.8
EL10As10g23963 Beta vulgaris HOM05D008037 ORTHO05D004271 1.0e-41 173.7 91 91.2
Hund25912 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.0e-41 173.7 112 75.9
Hund27633 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.0e-41 173.7 112 75.9
Hund27757 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.0e-41 173.7 112 75.9
Hund27833 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.0e-41 173.7 112 75.9
Hund28332 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.0e-41 173.7 112 75.9
Hund28440 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.0e-41 173.7 112 75.9
Hund28538 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.0e-41 173.7 112 75.9
Hund28614 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.0e-41 173.7 112 75.9
Hund28956 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.0e-41 173.7 112 75.9
Hund28981 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.0e-41 173.7 112 75.9
Hund29028 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.0e-41 173.7 112 75.9
Hund29091 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.0e-41 173.7 112 75.9
Hund29181 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.0e-41 173.7 112 75.9
Hund29249 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.0e-41 173.7 112 75.9
Hund29256 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.0e-41 173.7 112 75.9
Hund29263 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.0e-41 173.7 112 75.9
Hund29290 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.0e-41 173.7 112 75.9
Hund29318 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.0e-41 173.7 112 75.9
Hund29436 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.0e-41 173.7 112 75.9
Hund29853 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.0e-41 173.7 112 75.9
Hund30002 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.0e-41 173.7 112 75.9
Hund30263 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.0e-41 173.7 112 75.9
Hund30448 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.0e-41 173.7 112 75.9
Hund30632 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.0e-41 173.7 112 75.9
Hund30993 Selenicereus undatus HOM05D008037 ORTHO05D004271 1.0e-41 173.7 112 75.9
arahy.Tifrunner.gnm1.ann1.KJ09M7 Arachis hypogaea HOM05D008037 ORTHO05D004271 2.1e-39 166.0 133 64.7
Sopen02g009090 Solanum pennellii HOM05D008037 ORTHO05D004271 8.9e-38 160.6 100 78.0
Nitab4.5_0006502g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 3.4e-37 158.7 94 81.9
FAN22G1916 Fragaria x ananassa HOM05D008037 ORTHO05D004271 3.3e-32 142.1 140 57.9
Solyc00g500344.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 5.6e-32 141.4 68 95.6
arahy.Tifrunner.gnm1.ann1.JURL6Q Arachis hypogaea HOM05D001966 ORTHO05D007227 4.7e-31 138.3 121 60.3
FAN26G0971 Fragaria x ananassa HOM05D008037 ORTHO05D004271 8.3e-28 127.5 145 54.5
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 1.3e-25 120.2 139 52.5
RcHm_v2.0_Chr7g0221131 Rosa chinensis HOM05D008016 ORTHO05D004271 1.3e-25 120.2 130 53.1
Nitab4.5_0012234g0010 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.7e-25 119.8 94 68.1
Nitab4.5_0000066g0170 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.1e-24 117.1 98 65.3
COL.COLO4_33462 Corchorus olitorius HOM05D008016 ORTHO05D004271 1.5e-24 116.7 139 49.6
Sed0000516 Sechium edule HOM05D008037 ORTHO05D004271 4.7e-23 111.7 65 84.6
Zm00001eb441600 Zea mays HOM05D008037 ORTHO05D004271 4.7e-23 111.7 106 58.5
Nitab4.5_0008665g0060 Nicotiana tabacum HOM05D008037 ORTHO05D004271 6.2e-23 111.3 98 62.2
Nitab4.5_0001170g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 2.3e-22 109.4 58 86.2
CAN.G593.3 Capsicum annuum HOM05D001966 ORTHO05D004271 4.0e-22 108.6 59 86.4
arahy.Tifrunner.gnm1.ann1.KSIE27 Arachis hypogaea HOM05D008037 ORTHO05D004271 1.5e-21 106.7 57 82.5
Sopen10g016570 Solanum pennellii HOM05D008037 ORTHO05D004271 2.0e-21 106.3 66 78.8
Nitab4.5_0004841g0080 Nicotiana tabacum HOM05D008037 ORTHO05D004271 9.2e-19 97.4 51 84.3
Nitab4.5_0001986g0120 Nicotiana tabacum HOM05D008037 ORTHO05D004271 2.1e-18 96.3 88 60.2
arahy.Tifrunner.gnm1.ann1.54SFA9 Arachis hypogaea HOM05D008037 ORTHO05D004271 3.9e-17 92.0 107 51.4
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 8.6e-17 90.9 44 90.9
BcaC05g27379 Brassica carinata HOM05D008016 ORTHO05D021751 2.8e-15 85.9 107 55.1
EL10Ac6g13942 Beta vulgaris HOM05D008037 ORTHO05D004271 8.1e-15 84.3 49 83.7
RcHm_v2.0_Chr2g0095251 Rosa chinensis HOM05D008016 ORTHO05D004271 1.1e-14 84.0 45 86.7
Sc05g0004050 Simmondsia chinensis HOM05D001966 ORTHO05D007227 4.0e-14 82.0 44 81.8
Solyc03g058260.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 5.2e-14 81.6 64 60.9
BcaC04g20781 Brassica carinata HOM05D001966 ORTHO05D010449 6.8e-14 81.3 38 92.1
ClCG11G009640 Citrullus lanatus HOM05D008354 ORTHO05D010055 6.8e-14 81.3 58 69.0
Oeu040617.1 Olea europaea HOM05D008016 ORTHO05D004271 6.8e-14 81.3 45 84.4
Solyc11g021160.1 Solanum lycopersicum HOM05D001966 ORTHO05D010055 3.4e-13 79.0 123 39.0
CDE02G0533 Ceratophyllum demersum HOM05D008037 ORTHO05D004271 7.5e-13 77.8 46 80.4
COL.COLO4_03213 Corchorus olitorius HOM05D001966 ORTHO05D010986 1.3e-12 77.0 35 94.3
Gohir.D07G151450 Gossypium hirsutum HOM05D008016 ORTHO05D004271 2.4e-11 72.8 43 74.4
BolSC45t60899H Brassica oleracea HOM05D008016 ORTHO05D004271 4.1e-11 72.0 52 75.0
Nitab4.5_0004137g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 7.1e-11 71.2 60 66.7
Gohir.A09G103364 Gossypium hirsutum HOM05D008016 ORTHO05D004271 1.6e-10 70.1 31 100.0
Lj1g0013448 Lotus japonicus HOM05D007952 ORTHO05D009823 1.6e-10 70.1 31 100.0
Lalb_Chr03g0039361 Lupinus albus HOM05D008016 ORTHO05D004271 1.6e-10 70.1 31 100.0
Potri.008G221801 Populus trichocarpa HOM05D008037 ORTHO05D004271 2.1e-10 69.7 31 96.8
Nitab4.5_0005831g0120 Nicotiana tabacum HOM05D008354 ORTHO05D010055 2.7e-10 69.3 32 93.8
Peaxi162Scf00080g00520 Petunia axillaris HOM05D008037 ORTHO05D004271 3.5e-10 68.9 35 91.4
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 6.0e-10 68.2 31 96.8
Gohir.A09G101825 Gossypium hirsutum HOM05D008016 ORTHO05D004271 6.0e-10 68.2 33 90.9
Lsat_1_v5_gn_4_63021 Lactuca sativa HOM05D007952 ORTHO05D009823 6.0e-10 68.2 31 96.8
MD03G1269900 Malus domestica HOM05D008037 ORTHO05D004271 6.0e-10 68.2 44 75.0
RhsimPtG0005300 Rhododendron simsii HOM05D001966 ORTHO05D007227 6.0e-10 68.2 31 96.8
Solyc09g011150.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 6.0e-10 68.2 31 96.8
Phvul.009G203800 Phaseolus vulgaris HOM05D008037 ORTHO05D004271 7.8e-10 67.8 46 76.1
Nitab4.5_0001761g0150 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.0e-09 67.4 32 87.5
Gohir.A07G174766 Gossypium hirsutum HOM05D008016 ORTHO05D004271 1.3e-09 67.0 31 93.5
arahy.Tifrunner.gnm1.ann1.XGYT8C Arachis hypogaea HOM05D008037 ORTHO05D004271 1.7e-09 66.6 31 93.5
Lsat_1_v5_gn_2_98441 Lactuca sativa HOM05D008016 ORTHO05D004271 1.7e-09 66.6 31 93.5
Solyc04g082990.3 Solanum lycopersicum HOM05D005978 ORTHO05D004271 3.0e-09 65.9 31 93.5
Lalb_Chr20g0115041 Lupinus albus HOM05D008016 ORTHO05D004271 5.1e-09 65.1 51 62.7
Lj4g0016112 Lotus japonicus HOM05D007952 ORTHO05D009823 8.6e-09 64.3 31 93.5
arahy.Tifrunner.gnm1.ann1.61DFKT Arachis hypogaea HOM05D008037 ORTHO05D004271 1.9e-08 63.2 27 100.0
Hund28446 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-08 63.2 32 87.5
Hund28585 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-08 63.2 32 87.5
Hund28944 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-08 63.2 32 87.5
Hund28949 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-08 63.2 32 87.5
Hund28959 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-08 63.2 32 87.5
Hund29107 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-08 63.2 32 87.5
Hund29184 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-08 63.2 32 87.5
Hund29242 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-08 63.2 32 87.5
Hund29271 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-08 63.2 32 87.5
Hund29275 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-08 63.2 32 87.5
Hund29279 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-08 63.2 32 87.5
Hund29283 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-08 63.2 32 87.5
Hund29451 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-08 63.2 32 87.5
Hund29497 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-08 63.2 32 87.5
Hund29785 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-08 63.2 32 87.5
Hund29912 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-08 63.2 32 87.5
Hund30004 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-08 63.2 32 87.5
Hund30064 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-08 63.2 32 87.5
Hund30203 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-08 63.2 32 87.5
Solyc03g150126.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 1.9e-08 63.2 99 45.5
CAN.G134.6 Capsicum annuum HOM05D008037 ORTHO05D004271 4.3e-08 62.0 30 90.0
Nitab4.5_0027992g0040 Nicotiana tabacum HOM05D008037 ORTHO05D004271 5.6e-08 61.6 30 90.0
Glyma.15G274900 Glycine max HOM05D008016 ORTHO05D004271 7.3e-08 61.2 33 81.8
Peaxi162Scf00210g00153 Petunia axillaris HOM05D008037 ORTHO05D004271 7.3e-08 61.2 31 87.1
Gohir.A13G086605 Gossypium hirsutum HOM05D008016 ORTHO05D004271 1.2e-07 60.5 33 84.8
Manes.07G046200 Manihot esculenta HOM05D008037 ORTHO05D004271 2.1e-07 59.7 37 73.0
EL10Ac5g11360 Beta vulgaris HOM05D008037 ORTHO05D004271 3.6e-07 58.9 32 81.2
arahy.Tifrunner.gnm1.ann1.M1FG7L Arachis hypogaea HOM05D008354 ORTHO05D010055 8.1e-07 57.8 29 86.2
Migut.A01208 Erythranthe guttata HOM05D008016 ORTHO05D004271 1.8e-06 56.6 81 40.7
EL10Ac9g22450 Beta vulgaris HOM05D008037 ORTHO05D004271 2.4e-06 56.2 29 89.7
vmacro22395 Vaccinium macrocarpon HOM05D008016 ORTHO05D004271 2.4e-06 56.2 28 85.7
Sc02g0004570 Simmondsia chinensis HOM05D008037 ORTHO05D004271 3.1e-06 55.8 30 83.3
EL10As18g24159 Beta vulgaris HOM05D008037 ORTHO05D004271 8.9e-06 54.3 56 57.1
Solyc05g047670.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 8.9e-06 54.3 23 100.0


User provided reference genes

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