Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.20QRXD Arachis hypogaea HOM05D000461 ORTHO05D009042 1.0e-148 530.0 263 100.0
arahy.Tifrunner.gnm1.ann1.IDBP1F Arachis hypogaea HOM05D000461 ORTHO05D009042 2.6e-144 515.4 262 98.5
Glyma.13G281300 Glycine max HOM05D000461 ORTHO05D009042 9.1e-89 330.9 239 74.1
Psat5g246400 Pisum sativum HOM05D000461 ORTHO05D009042 9.4e-86 320.9 238 69.7
Phvul.005G086500 Phaseolus vulgaris HOM05D000461 ORTHO05D009042 4.7e-85 318.5 242 71.5
Lalb_Chr01g0017011 Lupinus albus HOM05D000461 ORTHO05D009042 1.0e-84 317.4 239 69.9
Glyma.12G220000 Glycine max HOM05D000461 ORTHO05D009042 8.8e-84 314.3 240 72.5
Medtr2g080290 Medicago truncatula HOM05D000461 ORTHO05D009042 8.8e-84 314.3 239 67.8
Ca_29614_v3 Cicer arietinum L. HOM05D000461 ORTHO05D009042 1.3e-82 310.5 244 67.6
TPR.G32851 Trifolium pratense HOM05D000461 ORTHO05D009042 1.7e-82 310.1 238 69.7
Lalb_Chr25g0286691 Lupinus albus HOM05D000461 ORTHO05D009042 2.2e-79 299.7 238 66.4
Lj3g0027305 Lotus japonicus HOM05D000461 ORTHO05D009042 1.8e-73 280.0 239 66.1
QL93p2023_0091 Quercus lobata HOM05D000461 ORTHO05D009042 2.1e-69 266.5 210 68.6
QL08p018706 Quercus lobata HOM05D000461 ORTHO05D009042 8.0e-69 264.6 210 68.1
Cfa020516 Carpinus fangiana HOM05D000461 ORTHO05D009768 6.8e-68 261.5 168 78.0
CiPaw.11G175500 Carya illinoinensis HOM05D000461 ORTHO05D009042 1.7e-66 256.9 235 60.4
TWI39G0508 Tripterygium wilfordii HOM05D000461 ORTHO05D009042 3.7e-66 255.8 232 61.6
Dinv08335 Davidia involucrata HOM05D000461 ORTHO05D009042 1.9e-62 243.4 186 65.1
Prupe.4G189000 Prunus persica HOM05D000461 ORTHO05D009042 2.1e-61 240.0 188 64.9
Hma1.2p1_1003F.1_g246730 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 3.6e-61 239.2 198 64.6
Nn1g03924 Nelumbo nucifera HOM05D000461 ORTHO05D009042 1.0e-60 237.7 229 58.5
Cpa.g.sc80.106 Carica papaya HOM05D000461 ORTHO05D009042 1.8e-60 236.9 198 63.6
Eucgr.F03352 Eucalyptus grandis HOM05D000461 ORTHO05D009042 3.0e-60 236.1 159 73.6
Dinv22369 Davidia involucrata HOM05D000461 ORTHO05D009042 4.0e-60 235.7 192 66.7
CSS0025788 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 8.9e-60 234.6 172 65.7
RcHm_v2.0_Chr5g0035191 Rosa chinensis HOM05D000461 ORTHO05D009042 7.5e-59 231.5 168 63.7
FAN11G0265 Fragaria x ananassa HOM05D000461 ORTHO05D009042 3.7e-58 229.2 173 65.9
Nitab4.5_0002565g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 3.7e-58 229.2 225 57.8
Solyc07g063530.3 Solanum lycopersicum HOM05D000461 ORTHO05D009042 3.7e-58 229.2 211 55.5
MD11G1238100 Malus domestica HOM05D000461 ORTHO05D009042 4.9e-58 228.8 168 70.2
FAN16G2536 Fragaria x ananassa HOM05D000461 ORTHO05D009042 1.8e-57 226.9 171 64.9
Manes.03G116000 Manihot esculenta HOM05D000461 ORTHO05D009042 1.8e-57 226.9 214 60.7
Nitab4.5_0000297g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 3.2e-57 226.1 215 57.7
FAN21G1502 Fragaria x ananassa HOM05D000461 ORTHO05D009042 7.0e-57 224.9 167 64.7
CANSAT11G1238 Cannabis sativa HOM05D000461 ORTHO05D009042 1.2e-56 224.2 254 52.0
Ciclev10009303m.g Citrus clementina HOM05D000461 ORTHO05D009042 1.2e-56 224.2 242 53.7
THA.LOC104799911 Tarenaya hassleriana HOM05D000461 ORTHO05D009042 1.6e-56 223.8 174 62.6
Rhsim04G0018200 Rhododendron simsii HOM05D000461 ORTHO05D009042 6.0e-56 221.9 245 50.6
PGR031G2091 Punica granatum HOM05D000461 ORTHO05D009042 1.7e-55 220.3 153 70.6
Ah.04g164980 Amaranthus hybridus HOM05D000461 ORTHO05D009042 6.6e-55 218.4 219 52.5
Duzib213G0849 Durio zibethinus HOM05D000461 ORTHO05D009042 1.9e-54 216.9 217 54.8
ClCG10G006570 Citrullus lanatus HOM05D000461 ORTHO05D009042 3.3e-54 216.1 175 64.0
Sopen07g031710 Solanum pennellii HOM05D000461 ORTHO05D009042 3.3e-54 216.1 145 68.3
Thecc.07G072900 Theobroma cacao HOM05D000461 ORTHO05D009042 3.3e-54 216.1 164 67.7
BcaC06g32696 Brassica carinata HOM05D000461 ORTHO05D009042 4.3e-54 215.7 177 59.9
BolC7t46022H Brassica oleracea HOM05D000461 ORTHO05D009042 1.6e-53 213.8 177 59.3
Sed0008890 Sechium edule HOM05D000461 ORTHO05D009042 2.8e-53 213.0 154 68.2
MSTRG.15210 Avicennia marina HOM05D000461 ORTHO05D009042 3.6e-53 212.6 155 69.0
MD03G1219800 Malus domestica HOM05D000461 ORTHO05D009042 3.6e-53 212.6 124 75.8
Potri.001G405800 Populus trichocarpa HOM05D000461 ORTHO05D009042 4.7e-53 212.2 239 52.7
Atru.chr2.2831 Acer truncatum HOM05D000461 ORTHO05D009042 6.2e-53 211.8 206 54.9
A03p57230 Brassica napus HOM05D000461 ORTHO05D009042 6.2e-53 211.8 174 59.8
C07p55420 Brassica napus HOM05D000461 ORTHO05D009042 6.2e-53 211.8 177 58.8
BraA03t14789Z Brassica rapa HOM05D000461 ORTHO05D009042 6.2e-53 211.8 174 59.8
Cc05_g12620 Coffea canephora HOM05D000461 ORTHO05D009042 8.0e-53 211.5 159 69.8
TAR626G1568 Trochodendron aralioides HOM05D000461 ORTHO05D009042 1.4e-52 210.7 137 72.3
CsaV3_3G006020 Cucumis sativus L. HOM05D000461 ORTHO05D009042 2.3e-52 209.9 153 67.3
Thhalv10026109m.g Eutrema salsugineum HOM05D000461 ORTHO05D009042 2.3e-52 209.9 147 66.0
Sp7g25320 Schrenkiella parvula HOM05D000461 ORTHO05D009042 4.0e-52 209.1 175 59.4
COL.COLO4_09469 Corchorus olitorius HOM05D000461 ORTHO05D009768 8.9e-52 208.0 162 64.8
Aqoxy1G02771 Aquilegia oxysepala HOM05D000461 ORTHO05D009042 1.2e-51 207.6 218 53.2
GSVIVG01014422001 Vitis vinifera HOM05D000461 ORTHO05D009042 2.6e-51 206.5 122 74.6
Sabra16G0269500 Salix brachista HOM05D000461 ORTHO05D009042 5.8e-51 205.3 265 48.7
Migut.M00872 Erythranthe guttata HOM05D000461 ORTHO05D009042 7.5e-51 204.9 169 65.1
Carub.0007s1348 Capsella rubella HOM05D000461 ORTHO05D009042 1.3e-50 204.1 175 57.7
Sabra16G0267700 Salix brachista HOM05D000461 ORTHO05D009042 2.9e-50 203.0 266 48.9
Sc03g0009630 Simmondsia chinensis HOM05D000461 ORTHO05D009042 4.9e-50 202.2 171 57.9
CARHR235060 Cardamine hirsuta HOM05D000461 ORTHO05D009042 1.1e-49 201.1 181 56.4
Lsat_1_v5_gn_7_106400 Lactuca sativa HOM05D000461 ORTHO05D009042 2.4e-49 199.9 154 63.6
CDE05G1014 Ceratophyllum demersum HOM05D000461 ORTHO05D009042 7.0e-49 198.4 147 64.6
AL7G25410 Arabidopsis lyrata HOM05D000461 ORTHO05D009042 9.2e-49 198.0 171 59.1
AT4G27390 Arabidopsis thaliana HOM05D000461 ORTHO05D009042 1.2e-48 197.6 145 64.8
Actinidia25643 Actinidia chinensis HOM05D000461 ORTHO05D009042 2.0e-48 196.8 158 61.4
Actinidia18752 Actinidia chinensis HOM05D000461 ORTHO05D009042 2.7e-48 196.4 187 58.8
Gorai.002G075700 Gossypium raimondii HOM05D000461 ORTHO05D009042 3.5e-48 196.1 121 71.9
Aa31LG5G10130 Aethionema arabicum HOM05D000461 ORTHO05D009042 4.6e-48 195.7 185 56.2
Gohir.D01G055600 Gossypium hirsutum HOM05D000461 ORTHO05D009042 7.8e-48 194.9 121 71.1
Gohir.A01G068300 Gossypium hirsutum HOM05D000461 ORTHO05D009042 1.0e-47 194.5 121 71.1
DCAR_013076 Daucus carota HOM05D000461 ORTHO05D009768 3.9e-47 192.6 145 62.8
Peaxi162Scf01216g00058 Petunia axillaris HOM05D000461 ORTHO05D009042 3.9e-47 192.6 214 50.9
FvH4_3g20860 Fragaria vesca HOM05D000461 ORTHO05D009042 8.6e-47 191.4 142 66.9
PSO210G3087 Papaver somniferum HOM05D000461 ORTHO05D009042 1.1e-46 191.0 182 55.5
SGA_v2.0_scaffold73G24312 Striga asiatica HOM05D000461 ORTHO05D009042 1.9e-46 190.3 161 63.4
PSO832G2223 Papaver somniferum HOM05D000461 ORTHO05D009042 5.6e-46 188.7 151 60.9
VMungo1080G0679 Vigna mungo HOM05D000461 ORTHO05D009042 9.5e-46 188.0 175 61.7
vmacro09553 Vaccinium macrocarpon HOM05D000461 ORTHO05D009042 2.0e-43 180.3 257 44.7
EL10Ac4g08079 Beta vulgaris HOM05D000461 ORTHO05D009042 4.4e-43 179.1 130 63.1
Oeu005436.1 Olea europaea HOM05D000461 ORTHO05D009042 7.5e-43 178.3 100 78.0
HanXRQChr11g0330871 Helianthus annuus HOM05D000461 ORTHO05D009042 2.9e-42 176.4 205 52.7
ECA236G1699 Erigeron canadensis HOM05D003383 ORTHO05D003890 1.9e-38 163.7 137 51.8
HPP92_001809 Vanilla planifolia HOM05D000461 ORTHO05D009042 2.5e-38 163.3 123 60.2
AUR62029322 Chenopodium quinoa HOM05D000461 ORTHO05D009042 4.3e-38 162.5 254 43.7
Actinidia35273 Actinidia chinensis HOM05D000461 ORTHO05D009042 3.1e-36 156.4 151 53.6
AUR62015609 Chenopodium quinoa HOM05D000461 ORTHO05D009042 2.6e-35 153.3 224 45.1
Haze_09518 Corylus avellana HOM05D000461 ORTHO05D009042 9.9e-35 151.4 236 44.9
Os05g0502500 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D009042 1.7e-34 150.6 164 49.4
MELO3C016549.2 Cucumis melo HOM05D000461 ORTHO05D009042 8.4e-34 148.3 98 67.3
PGSC0003DMG400019287 Solanum tuberosum HOM05D000461 ORTHO05D009042 1.1e-33 147.9 84 73.8
Zm00001eb352790 Zea mays HOM05D000461 ORTHO05D009042 4.1e-33 146.0 132 52.3
RcHm_v2.0_Chr5g0035211 Rosa chinensis HOM05D000461 ORTHO05D009042 6.6e-31 138.7 87 66.7
Mapoly0059s0039 Marchantia polymorpha HOM05D000461 ORTHO05D009042 4.3e-30 136.0 127 48.0
Hund28424 Selenicereus undatus HOM05D000461 ORTHO05D009042 5.6e-30 135.6 176 46.0
Hund28429 Selenicereus undatus HOM05D000461 ORTHO05D009042 5.6e-30 135.6 176 46.0
CSS0035681 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 7.3e-30 135.2 115 65.2
SMO347G0332 Selaginella moellendorffii HOM05D000461 ORTHO05D009042 6.4e-26 122.1 147 40.8
CBR_g3118 Chara braunii HOM05D000461 ORTHO05D009042 9.3e-25 118.2 123 46.3
Hma1.2p1_1003F.1_g246740 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 1.1e-22 111.3 58 81.0
ATR0693G207 Amborella trichopoda HOM05D000461 ORTHO05D009042 1.5e-22 110.9 93 62.4
Manes.15G162800 Manihot esculenta HOM05D000461 ORTHO05D009042 2.5e-22 110.2 63 76.2
Pp3c5_7600 Physcomitrium patens HOM05D000461 ORTHO05D009042 1.3e-21 107.8 118 43.2
unitig_85.g27405 Utricularia gibba HOM05D000461 ORTHO05D009042 1.9e-09 67.4 41 75.6
MELO3C030131.2 Cucumis melo HOM05D004229 ORTHO05D025211 8.7e-07 58.5 73 41.1
VMungo1080G0854 Vigna mungo HOM05D000659 ORTHO05D000505 3.3e-06 56.6 71 45.1


User provided reference genes

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