Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.209TGD Arachis hypogaea HOM05D006935 ORTHO05D008944 3.0e-60 235.0 115 100.0
arahy.Tifrunner.gnm1.ann1.0F4FSZ Arachis hypogaea HOM05D006935 ORTHO05D008944 9.6e-59 229.9 115 97.4
QL10p011920 Quercus lobata HOM05D006935 ORTHO05D008944 1.6e-53 212.6 114 86.8
Haze_07457 Corylus avellana HOM05D006935 ORTHO05D008944 1.0e-52 209.9 115 86.1
Lalb_Chr07g0182691 Lupinus albus HOM05D006935 ORTHO05D008944 1.0e-52 209.9 115 87.8
Manes.06G104000 Manihot esculenta HOM05D006935 ORTHO05D008944 1.7e-52 209.1 115 84.3
Atru.chr9.2451 Acer truncatum HOM05D006935 ORTHO05D008944 2.3e-52 208.8 115 85.2
CiPaw.11G027700 Carya illinoinensis HOM05D006935 ORTHO05D008944 3.0e-52 208.4 115 85.2
Duzib068G1137 Durio zibethinus HOM05D006935 ORTHO05D008944 3.0e-52 208.4 115 87.0
Thecc.03G010500 Theobroma cacao HOM05D006935 ORTHO05D008944 3.9e-52 208.0 115 86.1
FvH4_5g05200 Fragaria vesca HOM05D006935 ORTHO05D008944 8.7e-52 206.8 115 82.6
Oeu016368.1 Olea europaea HOM05D006935 ORTHO05D008944 8.7e-52 206.8 115 82.6
Ciclev10021410m.g Citrus clementina HOM05D006935 ORTHO05D008944 1.5e-51 206.1 115 85.2
TAR622G0425 Trochodendron aralioides HOM05D006935 ORTHO05D008944 1.5e-51 206.1 113 85.0
TPR.G37522 Trifolium pratense HOM05D006935 ORTHO05D008944 1.9e-51 205.7 115 87.0
VMungo1215G2532 Vigna mungo HOM05D006935 ORTHO05D008944 2.5e-51 205.3 116 85.3
Glyma.05G036900 Glycine max HOM05D006935 ORTHO05D008944 4.3e-51 204.5 116 84.5
MD14G1182500 Malus domestica HOM05D006935 ORTHO05D008944 5.6e-51 204.1 115 82.6
Potri.015G074700 Populus trichocarpa HOM05D006935 ORTHO05D008944 5.6e-51 204.1 115 83.5
TWI81G0925 Tripterygium wilfordii HOM05D006935 ORTHO05D008944 5.6e-51 204.1 114 84.2
TWI81G0947 Tripterygium wilfordii HOM05D006935 ORTHO05D008944 5.6e-51 204.1 114 84.2
Gohir.D11G001000 Gossypium hirsutum HOM05D006935 ORTHO05D008944 7.3e-51 203.8 115 84.3
Gorai.007G001900 Gossypium raimondii HOM05D006935 ORTHO05D008944 7.3e-51 203.8 115 84.3
Prupe.5G175000 Prunus persica HOM05D006935 ORTHO05D008944 7.3e-51 203.8 115 82.6
GSVIVG01007766001 Vitis vinifera HOM05D006935 ORTHO05D008944 9.6e-51 203.4 115 81.7
Cpa.g.sc124.48 Carica papaya HOM05D006935 ORTHO05D008944 1.6e-50 202.6 115 83.5
COL.COLO4_04599 Corchorus olitorius HOM05D006935 ORTHO05D008944 2.1e-50 202.2 115 82.6
Gohir.A11G001400 Gossypium hirsutum HOM05D006935 ORTHO05D008944 2.1e-50 202.2 115 83.5
Phvul.003G199600 Phaseolus vulgaris HOM05D006935 ORTHO05D008944 2.1e-50 202.2 116 84.5
MBI16_g05651_MAGBIO Magnolia biondii HOM05D006935 ORTHO05D008944 3.6e-50 201.4 113 82.3
CSS0041391 Camellia sinensis var. sinensis HOM05D006935 ORTHO05D008944 4.8e-50 201.1 115 82.6
AUR62030975 Chenopodium quinoa HOM05D006935 ORTHO05D008944 4.8e-50 201.1 115 80.9
CsaV3_1G008420 Cucumis sativus L. HOM05D006935 ORTHO05D008944 4.8e-50 201.1 115 81.7
Eucgr.B00368 Eucalyptus grandis HOM05D006935 ORTHO05D008944 4.8e-50 201.1 115 80.9
Medtr4g106970 Medicago truncatula HOM05D006935 ORTHO05D008944 4.8e-50 201.1 115 84.3
EL10Ac5g10761 Beta vulgaris HOM05D006935 ORTHO05D008944 6.2e-50 200.7 115 80.9
Sabra15G0098700 Salix brachista HOM05D006935 ORTHO05D008944 8.1e-50 200.3 115 81.7
PGR083G2867 Punica granatum HOM05D006935 ORTHO05D008944 1.1e-49 199.9 115 79.1
RcHm_v2.0_Chr7g0193711 Rosa chinensis HOM05D006935 ORTHO05D008944 1.1e-49 199.9 115 79.1
EL10Ac5g10748 Beta vulgaris HOM05D006935 ORTHO05D008944 1.8e-49 199.1 115 80.0
Nn4g22789 Nelumbo nucifera HOM05D006935 ORTHO05D008944 1.8e-49 199.1 115 80.0
Cc04_g13740 Coffea canephora HOM05D006935 ORTHO05D008944 2.4e-49 198.7 123 78.9
Actinidia19311 Actinidia chinensis HOM05D006935 ORTHO05D008944 3.1e-49 198.4 115 81.7
CANSAT80G0279 Cannabis sativa HOM05D006935 ORTHO05D008944 3.1e-49 198.4 115 81.7
AUR62008221 Chenopodium quinoa HOM05D006935 ORTHO05D008944 6.9e-49 197.2 112 81.2
Rhsim08G0171100 Rhododendron simsii HOM05D006935 ORTHO05D008944 6.9e-49 197.2 115 81.7
MSTRG.11442 Avicennia marina HOM05D006935 ORTHO05D008944 9.0e-49 196.8 115 79.1
vmacro19376 Vaccinium macrocarpon HOM05D006935 ORTHO05D008944 9.0e-49 196.8 115 80.9
Sopen03g033350 Solanum pennellii HOM05D006935 ORTHO05D008944 1.2e-48 196.4 115 80.9
PGSC0003DMG400024494 Solanum tuberosum HOM05D006935 ORTHO05D008944 2.0e-48 195.7 115 80.9
Lj4g0026943 Lotus japonicus HOM05D006935 ORTHO05D008944 2.6e-48 195.3 116 82.8
Migut.I00022 Erythranthe guttata HOM05D006935 ORTHO05D008944 4.4e-48 194.5 115 78.3
Aqoxy3G02966 Aquilegia oxysepala HOM05D006935 ORTHO05D008944 5.8e-48 194.1 115 76.5
Lsat_1_v5_gn_5_17180 Lactuca sativa HOM05D006935 ORTHO05D008944 7.6e-48 193.7 113 81.4
Sc12g0005390 Simmondsia chinensis HOM05D006935 ORTHO05D008944 9.9e-48 193.4 115 77.4
HanXRQChr16g0517271 Helianthus annuus HOM05D006935 ORTHO05D008944 2.9e-47 191.8 113 80.5
ECA236G1157 Erigeron canadensis HOM05D006935 ORTHO05D008944 4.9e-47 191.0 115 79.1
SalBow5G1860 Salvia bowleyana HOM05D006935 ORTHO05D008944 6.4e-47 190.7 117 76.9
SGA_v2.0_scaffold90G27953 Striga asiatica HOM05D006935 ORTHO05D008944 6.4e-47 190.7 117 76.1
THA.LOC104798977 Tarenaya hassleriana HOM05D006935 ORTHO05D008944 1.1e-46 189.9 115 76.5
Solyc03g114250.4 Solanum lycopersicum HOM05D006935 ORTHO05D008944 1.9e-46 189.1 110 80.9
ATR0730G238 Amborella trichopoda HOM05D006935 ORTHO05D008944 3.2e-46 188.3 115 74.8
Ah.02g110460 Amaranthus hybridus HOM05D006935 ORTHO05D008944 7.1e-46 187.2 115 74.8
Os01g0660900 Oryza sativa ssp. japonica HOM05D006935 ORTHO05D008944 1.2e-45 186.4 115 79.1
Aa31LG11G860 Aethionema arabicum HOM05D006935 ORTHO05D008944 1.6e-45 186.0 115 75.7
Cfa019105 Carpinus fangiana HOM05D006935 ORTHO05D004872 2.7e-45 185.3 104 85.6
AL8G39840 Arabidopsis lyrata HOM05D006935 ORTHO05D008944 6.0e-45 184.1 115 75.7
PSO302G0172 Papaver somniferum HOM05D006935 ORTHO05D008944 7.9e-45 183.7 111 74.8
Carub.0008s2355 Capsella rubella HOM05D006935 ORTHO05D008944 1.0e-44 183.3 115 74.8
FAN04G2667 Fragaria x ananassa HOM05D006935 ORTHO05D008944 1.0e-44 183.3 103 82.5
Thhalv10004703m.g Eutrema salsugineum HOM05D006935 ORTHO05D008944 2.3e-44 182.2 115 75.7
FAN18G4193 Fragaria x ananassa HOM05D006935 ORTHO05D004872 2.3e-44 182.2 104 80.8
BcaB02g09696 Brassica carinata HOM05D006935 ORTHO05D008944 3.0e-44 181.8 115 74.8
BraA06t25905Z Brassica rapa HOM05D006935 ORTHO05D008944 3.0e-44 181.8 115 75.7
MBI16_g32800_MAGBIO Magnolia biondii HOM05D006935 ORTHO05D008944 3.0e-44 181.8 113 76.1
Sp2g25990 Schrenkiella parvula HOM05D006935 ORTHO05D008944 3.0e-44 181.8 115 74.8
Zm00001eb359580 Zea mays HOM05D006935 ORTHO05D008944 3.0e-44 181.8 113 77.0
BcaC01g02525 Brassica carinata HOM05D006935 ORTHO05D008944 3.9e-44 181.4 115 75.7
A06p29590 Brassica napus HOM05D006935 ORTHO05D008944 3.9e-44 181.4 115 74.8
C03p63900 Brassica napus HOM05D006935 ORTHO05D008944 3.9e-44 181.4 115 75.7
BolC3t18645H Brassica oleracea HOM05D006935 ORTHO05D008944 3.9e-44 181.4 115 75.7
AT5G62840 Arabidopsis thaliana HOM05D006935 ORTHO05D008944 6.6e-44 180.6 115 73.9
CARHR276620 Cardamine hirsuta HOM05D006935 ORTHO05D008944 8.7e-44 180.3 115 73.9
Nitab4.5_0005862g0020 Nicotiana tabacum HOM05D006935 ORTHO05D008944 2.5e-43 178.7 150 62.0
MELO3C002259.2 Cucumis melo HOM05D006935 ORTHO05D008944 4.3e-43 177.9 103 80.6
ClCG01G013080 Citrullus lanatus HOM05D006935 ORTHO05D008944 2.8e-42 175.3 103 79.6
unitig_749.g13472 Utricularia gibba HOM05D006935 ORTHO05D008944 2.8e-42 175.3 114 73.7
Peaxi162Scf00017g02830 Petunia axillaris HOM05D006935 ORTHO05D008944 4.0e-41 171.4 124 70.2
SEGI_12501 Sequoiadendron giganteum HOM05D006935 ORTHO05D008944 4.0e-41 171.4 115 70.4
Hund09430 Selenicereus undatus HOM05D006935 ORTHO05D004872 2.0e-40 169.1 106 75.5
Nitab4.5_0000852g0050 Nicotiana tabacum HOM05D006935 ORTHO05D008944 1.3e-39 166.4 108 75.9
HPP92_024712 Vanilla planifolia HOM05D006935 ORTHO05D008944 4.9e-39 164.5 112 69.6
CDE04G2457 Ceratophyllum demersum HOM05D005049 ORTHO05D004872 2.4e-38 162.2 104 72.1
Dinv09149 Davidia involucrata HOM05D006935 ORTHO05D008944 1.8e-33 146.0 83 85.5
Pp3c16_7000 Physcomitrium patens HOM05D006935 ORTHO05D008944 5.3e-33 144.4 107 65.4
Mapoly0091s0071 Marchantia polymorpha HOM05D006935 ORTHO05D008944 7.6e-32 140.6 115 64.3
Lj5C123T8 Lonicera japonica HOM05D006935 ORTHO05D008944 1.1e-30 136.7 77 83.1
Psat4g057680 Pisum sativum HOM05D006935 ORTHO05D008944 3.9e-28 128.3 75 84.0
CAN.G781.17 Capsicum annuum HOM05D006935 ORTHO05D008944 8.7e-28 127.1 75 81.3
Peaxi162Scf00017g02821 Petunia axillaris HOM05D006935 ORTHO05D008944 1.5e-27 126.3 75 81.3
Ca_21910_v3 Cicer arietinum L. HOM05D006935 ORTHO05D008944 2.5e-27 125.6 75 84.0
SMO141G0200 Selaginella moellendorffii HOM05D006935 ORTHO05D008944 2.9e-23 112.1 75 72.0
AagrBONN_evm.TU.Sc2ySwM_117.38 Anthoceros agrestis HOM05D006935 ORTHO05D008944 6.1e-21 104.4 73 71.2
Cre06.g272300 Chlamydomonas reinhardtii HOM05D006935 ORTHO05D008944 8.7e-20 100.5 99 49.5
Actinidia20183 Actinidia chinensis HOM05D006935 ORTHO05D008944 1.9e-19 99.4 65 76.9
FAN08G3443 Fragaria x ananassa HOM05D006935 ORTHO05D004872 1.0e-15 87.0 51 78.4
MD06G1175700 Malus domestica HOM05D006935 ORTHO05D008944 3.3e-11 72.0 44 77.3
Psat4g057640 Pisum sativum HOM05D006935 ORTHO05D008944 3.7e-10 68.6 37 83.8


User provided reference genes

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