Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.1ZYA2W Arachis hypogaea HOM05D007014 ORTHO05D008894 4.4e-83 311.2 156 100.0
arahy.Tifrunner.gnm1.ann1.YPG8JQ Arachis hypogaea HOM05D007014 ORTHO05D008894 4.9e-82 307.8 155 99.4
arahy.Tifrunner.gnm1.ann1.UXPW02 Arachis hypogaea HOM05D007014 ORTHO05D008894 1.6e-80 302.8 155 98.1
arahy.Tifrunner.gnm1.ann1.THUB96 Arachis hypogaea HOM05D007014 ORTHO05D008894 4.7e-69 264.6 135 98.5
Phvul.011G117200 Phaseolus vulgaris HOM05D007014 ORTHO05D008894 1.0e-63 246.9 153 80.4
Medtr4g046047 Medicago truncatula HOM05D007014 ORTHO05D008894 2.3e-63 245.7 153 77.8
Ca_28202_v3 Cicer arietinum L. HOM05D007014 ORTHO05D008894 6.6e-63 244.2 154 78.6
Lj3g0024821 Lotus japonicus HOM05D007014 ORTHO05D008894 6.6e-63 244.2 153 79.7
TPR.G21768 Trifolium pratense HOM05D007014 ORTHO05D008894 1.3e-61 240.0 153 77.8
Psat7g157760 Pisum sativum HOM05D007014 ORTHO05D008894 8.1e-61 237.3 153 75.8
Glyma.12G111800 Glycine max HOM05D007014 ORTHO05D008894 1.2e-59 233.4 153 73.9
Glyma.06G293600 Glycine max HOM05D007014 ORTHO05D008894 4.9e-58 228.0 153 73.9
Manes.12G090900 Manihot esculenta HOM05D007014 ORTHO05D008894 2.4e-57 225.7 155 72.9
QL08p038417 Quercus lobata HOM05D007014 ORTHO05D008894 4.2e-57 224.9 153 70.6
Haze_13147 Corylus avellana HOM05D007014 ORTHO05D008894 2.7e-56 222.2 154 71.4
Dinv02170 Davidia involucrata HOM05D007014 ORTHO05D008894 1.3e-55 219.9 154 70.8
Nn1g06593 Nelumbo nucifera HOM05D007014 ORTHO05D008894 1.3e-55 219.9 153 68.0
GSVIVG01030373001 Vitis vinifera HOM05D007014 ORTHO05D008894 1.3e-55 219.9 152 70.4
Cfa014594 Carpinus fangiana HOM05D007014 ORTHO05D008894 1.8e-55 219.5 154 69.5
PSO210G2618 Papaver somniferum HOM05D007014 ORTHO05D008894 1.5e-54 216.5 149 67.8
MD09G1249800 Malus domestica HOM05D007014 ORTHO05D008894 3.3e-54 215.3 158 69.6
AL1G13150 Arabidopsis lyrata HOM05D007014 ORTHO05D008894 7.4e-54 214.2 153 67.3
PSO832G4125 Papaver somniferum HOM05D007014 ORTHO05D008894 1.6e-53 213.0 149 67.1
TWI36G0686 Tripterygium wilfordii HOM05D007014 ORTHO05D008894 1.6e-53 213.0 150 69.3
Peaxi162Scf02133g00022 Petunia axillaris HOM05D007014 ORTHO05D008894 4.8e-53 211.5 151 66.9
RcHm_v2.0_Chr6g0277731 Rosa chinensis HOM05D007014 ORTHO05D008894 6.2e-53 211.1 153 67.3
Sabra13G0113800 Salix brachista HOM05D007014 ORTHO05D008894 6.2e-53 211.1 154 67.5
Sed0017748 Sechium edule HOM05D007014 ORTHO05D008894 6.2e-53 211.1 149 69.8
Potri.013G134102 Populus trichocarpa HOM05D007014 ORTHO05D008894 8.1e-53 210.7 154 67.5
BcaC07g42241 Brassica carinata HOM05D007014 ORTHO05D008894 1.1e-52 210.3 153 66.0
Prupe.3G155400 Prunus persica HOM05D007014 ORTHO05D008894 1.1e-52 210.3 153 67.3
ClCG02G017580 Citrullus lanatus HOM05D007014 ORTHO05D008894 1.4e-52 209.9 148 69.6
Nitab4.5_0003022g0100 Nicotiana tabacum HOM05D007014 ORTHO05D008894 1.4e-52 209.9 151 66.2
Potri.013G134000 Populus trichocarpa HOM05D007014 ORTHO05D008894 1.4e-52 209.9 154 67.5
Oeu029922.1 Olea europaea HOM05D007014 ORTHO05D008894 1.8e-52 209.5 153 67.3
Lj8A113T47 Lonicera japonica HOM05D007014 ORTHO05D008894 4.0e-52 208.4 149 67.8
vmacro09278 Vaccinium macrocarpon HOM05D007014 ORTHO05D008894 4.0e-52 208.4 154 65.6
Sp1g02550 Schrenkiella parvula HOM05D007014 ORTHO05D008894 5.3e-52 208.0 153 64.7
MELO3C024591.2 Cucumis melo HOM05D007014 ORTHO05D008894 6.9e-52 207.6 148 69.6
PGSC0003DMG400007868 Solanum tuberosum HOM05D007014 ORTHO05D008894 1.5e-51 206.5 153 65.4
Thhalv10008981m.g Eutrema salsugineum HOM05D007014 ORTHO05D008894 2.0e-51 206.1 149 67.1
Hma1.2p1_1201F.1_g266700 Hydrangea macrophylla HOM05D007014 ORTHO05D008894 2.6e-51 205.7 148 68.9
VMungo1127G0420 Vigna mungo HOM05D007014 ORTHO05D008894 2.6e-51 205.7 177 62.7
Ciclev10022606m.g Citrus clementina HOM05D007014 ORTHO05D008894 3.4e-51 205.3 151 66.9
Carub.0001s0276 Capsella rubella HOM05D007014 ORTHO05D008894 4.5e-51 204.9 153 64.7
Rhsim04G0068000 Rhododendron simsii HOM05D007014 ORTHO05D008894 4.5e-51 204.9 150 66.7
TAR629G1268 Trochodendron aralioides HOM05D007014 ORTHO05D008894 4.5e-51 204.9 155 64.5
AT1G03650 Arabidopsis thaliana HOM05D007014 ORTHO05D008894 9.9e-51 203.8 153 64.7
FvH4_2g15130 Fragaria vesca HOM05D007014 ORTHO05D008894 1.3e-50 203.4 154 66.2
CAN.G486.11 Capsicum annuum HOM05D007014 ORTHO05D008894 1.7e-50 203.0 151 64.9
CSS0024097 Camellia sinensis var. sinensis HOM05D007014 ORTHO05D008894 2.9e-50 202.2 155 66.5
Ciclev10022631m.g Citrus clementina HOM05D007014 ORTHO05D008894 2.9e-50 202.2 153 64.7
PGSC0003DMG400007866 Solanum tuberosum HOM05D007014 ORTHO05D008894 2.9e-50 202.2 153 63.4
SalBow1G7232 Salvia bowleyana HOM05D007014 ORTHO05D008894 3.8e-50 201.8 153 63.4
Sopen12g005310 Solanum pennellii HOM05D007014 ORTHO05D008894 4.9e-50 201.4 153 66.0
BcaC07g42236 Brassica carinata HOM05D007014 ORTHO05D008894 6.4e-50 201.1 150 63.3
CARHR002980 Cardamine hirsuta HOM05D007014 ORTHO05D008894 8.4e-50 200.7 151 64.2
Gohir.D13G066000 Gossypium hirsutum HOM05D007014 ORTHO05D008894 8.4e-50 200.7 158 67.7
Gorai.013G075300 Gossypium raimondii HOM05D007014 ORTHO05D008894 8.4e-50 200.7 158 67.7
BcaC07g42250 Brassica carinata HOM05D007014 ORTHO05D008894 1.4e-49 199.9 157 61.8
C08p52830 Brassica napus HOM05D007014 ORTHO05D008894 1.4e-49 199.9 157 61.8
FAN27G2134 Fragaria x ananassa HOM05D007014 ORTHO05D008894 1.4e-49 199.9 154 64.9
BolC8t52799H Brassica oleracea HOM05D007014 ORTHO05D008894 3.2e-49 198.7 151 64.9
MBI17_g43194_MAGBIO Magnolia biondii HOM05D007014 ORTHO05D008894 3.2e-49 198.7 154 66.9
BraA09t42163Z Brassica rapa HOM05D007014 ORTHO05D008894 5.5e-49 198.0 151 63.6
Duzib052G1001 Durio zibethinus HOM05D007014 ORTHO05D008894 5.5e-49 198.0 158 66.5
HanXRQChr17g0553541 Helianthus annuus HOM05D007014 ORTHO05D008894 7.1e-49 197.6 153 62.1
Aa31LG1G20970 Aethionema arabicum HOM05D007014 ORTHO05D008894 9.3e-49 197.2 152 62.5
Thecc.02G177900 Theobroma cacao HOM05D007014 ORTHO05D008894 9.3e-49 197.2 154 65.6
FAN15G2141 Fragaria x ananassa HOM05D007014 ORTHO05D008894 1.2e-48 196.8 152 65.1
Gohir.A13G056000 Gossypium hirsutum HOM05D007014 ORTHO05D008894 1.2e-48 196.8 158 65.8
Solyc12g010680.3 Solanum lycopersicum HOM05D007014 ORTHO05D008894 1.2e-48 196.8 153 63.4
MSTRG.12316 Avicennia marina HOM05D007014 ORTHO05D008894 1.6e-48 196.4 153 62.7
CANSAT78G1474 Cannabis sativa HOM05D007014 ORTHO05D008894 2.1e-48 196.1 148 64.9
CiPaw.03G175500 Carya illinoinensis HOM05D007014 ORTHO05D008894 2.1e-48 196.1 134 70.1
EL10Ac9g20747 Beta vulgaris HOM05D007014 ORTHO05D008894 2.7e-48 195.7 153 59.5
Cpa.g.sc34.144 Carica papaya HOM05D007014 ORTHO05D008894 2.7e-48 195.7 150 62.7
COL.COLO4_07554 Corchorus olitorius HOM05D007014 ORTHO05D008894 2.7e-48 195.7 153 66.7
CsaV3_6G013010 Cucumis sativus L. HOM05D007014 ORTHO05D008894 3.5e-48 195.3 158 62.0
BcaC07g42259 Brassica carinata HOM05D007014 ORTHO05D008894 4.6e-48 194.9 157 61.8
THA.LOC104801176 Tarenaya hassleriana HOM05D007014 ORTHO05D008894 4.6e-48 194.9 148 63.5
Cc05_g06870 Coffea canephora HOM05D007014 ORTHO05D008894 1.0e-47 193.7 154 63.0
Aqoxy4G01010 Aquilegia oxysepala HOM05D007014 ORTHO05D008894 1.3e-47 193.4 150 60.7
Nitab4.5_0002575g0020 Nicotiana tabacum HOM05D007014 ORTHO05D008894 3.9e-47 191.8 168 57.7
SGA_v2.0_scaffold307G48064 Striga asiatica HOM05D007014 ORTHO05D008894 8.7e-47 190.7 151 62.9
Sc21g0002660 Simmondsia chinensis HOM05D007014 ORTHO05D008894 7.4e-46 187.6 153 59.5
FAN24G2354 Fragaria x ananassa HOM05D007014 ORTHO05D008894 1.6e-45 186.4 153 62.1
CDE02G4296 Ceratophyllum demersum HOM05D007014 ORTHO05D008894 2.1e-45 186.0 150 60.7
ATR0680G283 Amborella trichopoda HOM05D007014 ORTHO05D008894 3.7e-45 185.3 153 57.5
Migut.H01076 Erythranthe guttata HOM05D007014 ORTHO05D008894 6.9e-44 181.0 150 58.0
HPP92_002954 Vanilla planifolia HOM05D007014 ORTHO05D008894 6.9e-44 181.0 162 57.4
unitig_21.g20401 Utricularia gibba HOM05D007014 ORTHO05D008894 4.5e-43 178.3 149 54.4
Lsat_1_v5_gn_8_133041 Lactuca sativa HOM05D007014 ORTHO05D008894 2.5e-41 172.6 154 53.2
Zm00001eb044400 Zea mays HOM05D007014 ORTHO05D008894 4.2e-41 171.8 152 55.3
Zm00001eb044470 Zea mays HOM05D007014 ORTHO05D008894 4.6e-40 168.3 152 54.6
TWI36G1550 Tripterygium wilfordii HOM05D007014 ORTHO05D008894 1.5e-38 163.3 154 51.9
ECA233G3399 Erigeron canadensis HOM05D007880 ORTHO05D003386 1.9e-38 162.9 134 57.5
Lalb_Chr01g0005301 Lupinus albus HOM05D007014 ORTHO05D008894 1.4e-36 156.8 92 79.3
Actinidia30478 Actinidia chinensis HOM05D007014 ORTHO05D008894 5.0e-34 148.3 97 73.2
Os10g0500400 Oryza sativa ssp. japonica HOM05D007014 ORTHO05D008894 5.5e-33 144.8 167 47.3
Mapoly0101s0002 Marchantia polymorpha HOM05D007014 ORTHO05D008894 2.1e-32 142.9 163 47.9
C08p52730 Brassica napus HOM05D007014 ORTHO05D008894 2.7e-32 142.5 101 69.3
A09p68280 Brassica napus HOM05D001041 ORTHO05D000846 1.4e-31 140.2 100 68.0
AagrBONN_evm.TU.Sc2ySwM_344.4393 Anthoceros agrestis HOM05D007014 ORTHO05D008894 1.4e-28 130.2 153 48.4
Lsat_1_v5_gn_8_132641 Lactuca sativa HOM05D007014 ORTHO05D008894 1.5e-27 126.7 93 64.5
QL12p004320 Quercus lobata HOM05D007014 ORTHO05D008894 1.4e-23 113.6 78 67.9
Sabra11G0072100 Salix brachista HOM05D000036 ORTHO05D000095 4.1e-20 102.1 77 64.9
Sabra15G0066900 Salix brachista HOM05D000036 ORTHO05D000095 4.1e-20 102.1 77 64.9
Sabra13G0113700 Salix brachista HOM05D000264 ORTHO05D000152 7.0e-20 101.3 77 64.9
Ciclev10023600m.g Citrus clementina HOM05D007014 ORTHO05D008894 2.0e-19 99.8 76 61.8
Hund01169 Selenicereus undatus HOM05D007014 ORTHO05D008894 8.5e-18 94.4 78 56.4
DCAR_013001 Daucus carota HOM05D007014 ORTHO05D008894 1.4e-15 87.0 81 54.3
AUR62037369 Chenopodium quinoa HOM05D007014 ORTHO05D008894 5.2e-15 85.1 65 60.0
MELO3C013609.2 Cucumis melo HOM05D007014 ORTHO05D008894 4.4e-14 82.0 65 58.5
PRCOL_00005877 Prasinoderma coloniale HOM05D007014 ORTHO05D008894 2.4e-12 76.3 100 42.0
Cre17.g705950 Chlamydomonas reinhardtii HOM05D007014 ORTHO05D008894 4.2e-09 65.5 124 35.5
Pp3c2_27490 Physcomitrium patens HOM05D007014 ORTHO05D008894 2.7e-08 62.8 78 47.4
SalBow1G7442 Salvia bowleyana HOM05D007014 ORTHO05D008894 6.1e-08 61.6 49 51.0


User provided reference genes

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