Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.1Z01XL Arachis hypogaea HOM05D006087 ORTHO05D007479 2.2e-43 178.7 102 100.0
Phvul.001G262000 Phaseolus vulgaris HOM05D006087 ORTHO05D007479 2.0e-31 139.0 102 76.5
Glyma.18G006400 Glycine max HOM05D006087 ORTHO05D007479 1.3e-30 136.3 100 75.0
Glyma.11G250700 Glycine max HOM05D006087 ORTHO05D007479 2.8e-30 135.2 100 74.0
Migut.K00735 Erythranthe guttata HOM05D006087 ORTHO05D007479 3.1e-29 131.7 102 72.5
Oeu036868.1 Olea europaea HOM05D006087 ORTHO05D007479 1.6e-28 129.4 102 64.7
Lalb_Chr12g0206161 Lupinus albus HOM05D006087 ORTHO05D007479 2.0e-28 129.0 102 66.7
TWI75G0102 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 4.5e-28 127.9 101 66.3
Manes.12G011100 Manihot esculenta HOM05D006087 ORTHO05D007479 7.7e-28 127.1 102 71.6
TWI18G0911 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 7.7e-28 127.1 101 65.3
Carub.0008s0544 Capsella rubella HOM05D006087 ORTHO05D007479 1.7e-27 125.9 100 64.0
Cpa.g.sc43.59 Carica papaya HOM05D006087 ORTHO05D007479 1.7e-27 125.9 102 75.5
QL03p052667 Quercus lobata HOM05D006087 ORTHO05D007479 1.7e-27 125.9 101 70.3
A06p47950 Brassica napus HOM05D006087 ORTHO05D007479 2.3e-27 125.6 100 63.0
C07p25860 Brassica napus HOM05D006087 ORTHO05D007479 2.3e-27 125.6 100 63.0
BolC7t43103H Brassica oleracea HOM05D006087 ORTHO05D007479 2.3e-27 125.6 100 63.0
BraA06t27665Z Brassica rapa HOM05D006087 ORTHO05D007479 2.3e-27 125.6 100 63.0
Ciclev10033174m.g Citrus clementina HOM05D006087 ORTHO05D007479 2.9e-27 125.2 102 63.7
Eucgr.B03495 Eucalyptus grandis HOM05D006087 ORTHO05D007479 3.8e-27 124.8 100 65.0
Potri.003G171800 Populus trichocarpa HOM05D006087 ORTHO05D007479 3.8e-27 124.8 100 74.0
Sp2g08050 Schrenkiella parvula HOM05D006087 ORTHO05D007479 3.8e-27 124.8 100 62.0
TAR374G1631 Trochodendron aralioides HOM05D006087 ORTHO05D007479 3.8e-27 124.8 102 62.7
Atru.chr11.2326 Acer truncatum HOM05D006087 ORTHO05D007479 8.6e-27 123.6 102 62.7
AT5G43260 Arabidopsis thaliana HOM05D006087 ORTHO05D007479 8.6e-27 123.6 100 63.0
THA.LOC104812595 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 8.6e-27 123.6 102 61.8
Thecc.02G208200 Theobroma cacao HOM05D006087 ORTHO05D007479 8.6e-27 123.6 103 69.9
AL8G17230 Arabidopsis lyrata HOM05D006087 ORTHO05D007479 1.1e-26 123.2 100 62.0
Lsat_1_v5_gn_4_3481 Lactuca sativa HOM05D006087 ORTHO05D007479 1.1e-26 123.2 104 61.5
Sc04g0010140 Simmondsia chinensis HOM05D006087 ORTHO05D007479 1.1e-26 123.2 102 66.7
Hma1.2p1_0065F.1_g035460 Hydrangea macrophylla HOM05D006087 ORTHO05D007479 1.5e-26 122.9 102 67.6
Lalb_Chr23g0278081 Lupinus albus HOM05D006087 ORTHO05D007479 1.5e-26 122.9 102 75.5
TWI36G1569 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 1.5e-26 122.9 99 61.6
CANSAT01G2640 Cannabis sativa HOM05D006087 ORTHO05D007479 1.9e-26 122.5 102 66.7
Cc11_g16920 Coffea canephora HOM05D006087 ORTHO05D007479 1.9e-26 122.5 102 62.7
MELO3C011864.2 Cucumis melo HOM05D006087 ORTHO05D007479 1.9e-26 122.5 101 65.3
MD13G1119200 Malus domestica HOM05D006087 ORTHO05D007479 1.9e-26 122.5 101 64.4
SGA_v2.0_scaffold9G04680 Striga asiatica HOM05D006087 ORTHO05D007479 1.9e-26 122.5 102 59.8
Duzib251G0251 Durio zibethinus HOM05D006087 ORTHO05D007479 2.5e-26 122.1 101 68.3
Lj4g0011842 Lotus japonicus HOM05D006087 ORTHO05D007479 3.3e-26 121.7 100 65.0
Ah.03g136140 Amaranthus hybridus HOM05D006087 ORTHO05D007479 4.2e-26 121.3 101 63.4
BcaC04g21941 Brassica carinata HOM05D006087 ORTHO05D007479 5.5e-26 120.9 100 60.0
C09p25630 Brassica napus HOM05D006087 ORTHO05D007479 5.5e-26 120.9 100 60.0
BolC9t55466H Brassica oleracea HOM05D006087 ORTHO05D007479 5.5e-26 120.9 100 60.0
CiPaw.05G109600 Carya illinoinensis HOM05D006087 ORTHO05D007479 5.5e-26 120.9 102 60.8
THA.LOC104820522 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 5.5e-26 120.9 102 71.6
unitig_749.g13305 Utricularia gibba HOM05D006087 ORTHO05D007479 5.5e-26 120.9 100 60.0
CARHR180610 Cardamine hirsuta HOM05D006087 ORTHO05D007479 7.2e-26 120.6 100 66.0
Gohir.D04G182800 Gossypium hirsutum HOM05D006087 ORTHO05D007479 9.5e-26 120.2 103 68.0
Gorai.012G175800 Gossypium raimondii HOM05D006087 ORTHO05D007479 9.5e-26 120.2 103 68.0
Cfa009371 Carpinus fangiana HOM05D006087 ORTHO05D007479 1.6e-25 119.4 102 65.7
COL.COLO4_20404 Corchorus olitorius HOM05D006087 ORTHO05D007479 1.6e-25 119.4 103 68.0
Haze_12421 Corylus avellana HOM05D006087 ORTHO05D007479 1.6e-25 119.4 102 65.7
CsaV3_5G030260 Cucumis sativus L. HOM05D006087 ORTHO05D007479 1.6e-25 119.4 101 63.4
MSTRG.8005 Avicennia marina HOM05D006087 ORTHO05D007479 2.1e-25 119.0 99 70.7
BraA09t37633Z Brassica rapa HOM05D006087 ORTHO05D007479 2.1e-25 119.0 100 60.0
Gohir.A04G139600 Gossypium hirsutum HOM05D006087 ORTHO05D007479 2.8e-25 118.6 103 67.0
A09p20220 Brassica napus HOM05D006087 ORTHO05D007479 3.6e-25 118.2 100 60.0
Psat5g096360 Pisum sativum HOM05D006087 ORTHO05D007479 3.6e-25 118.2 102 65.7
Solyc05g015470.1 Solanum lycopersicum HOM05D006087 ORTHO05D007479 3.6e-25 118.2 99 62.6
Sopen05g010780 Solanum pennellii HOM05D006087 ORTHO05D007479 3.6e-25 118.2 99 62.6
Aa31LG9G13330 Aethionema arabicum HOM05D006087 ORTHO05D007479 6.1e-25 117.5 100 61.0
PGSC0003DMG400014051 Solanum tuberosum HOM05D006087 ORTHO05D007479 6.1e-25 117.5 99 62.6
Oeu004448.1 Olea europaea HOM05D006087 ORTHO05D007479 8.0e-25 117.1 102 62.7
TPR.G17782 Trifolium pratense HOM05D006087 ORTHO05D007479 8.0e-25 117.1 102 64.7
Ca_16458_v3 Cicer arietinum L. HOM05D006087 ORTHO05D007479 1.0e-24 116.7 113 61.1
Gohir.A12G148826 Gossypium hirsutum HOM05D006087 ORTHO05D007479 1.4e-24 116.3 101 63.4
Potri.001G056601 Populus trichocarpa HOM05D006087 ORTHO05D007479 1.4e-24 116.3 102 60.8
BcaB07g31021 Brassica carinata HOM05D006087 ORTHO05D007479 1.8e-24 115.9 100 58.0
CiPaw.06G102800 Carya illinoinensis HOM05D006087 ORTHO05D007479 1.8e-24 115.9 102 62.7
Medtr3g085300 Medicago truncatula HOM05D006087 ORTHO05D007479 1.8e-24 115.9 102 64.7
TAR622G0081 Trochodendron aralioides HOM05D006087 ORTHO05D007479 1.8e-24 115.9 104 59.6
FAN17G2012 Fragaria x ananassa HOM05D006087 ORTHO05D007479 2.3e-24 115.5 99 58.6
Gohir.D12G152800 Gossypium hirsutum HOM05D006087 ORTHO05D007479 2.3e-24 115.5 101 59.4
Gorai.008G165300 Gossypium raimondii HOM05D006087 ORTHO05D007479 2.3e-24 115.5 101 59.4
PGR102G3303 Punica granatum HOM05D006087 ORTHO05D007479 2.3e-24 115.5 100 71.0
Actinidia20712 Actinidia chinensis HOM05D006087 ORTHO05D007479 3.0e-24 115.2 102 57.8
MD16G1119600 Malus domestica HOM05D006087 ORTHO05D007479 3.0e-24 115.2 101 58.4
Ah.02g130900 Amaranthus hybridus HOM05D006087 ORTHO05D007479 4.0e-24 114.8 97 60.8
Duzib248G0070 Durio zibethinus HOM05D006087 ORTHO05D007479 5.2e-24 114.4 103 61.2
FAN07G1634 Fragaria x ananassa HOM05D006087 ORTHO05D007479 5.2e-24 114.4 99 57.6
FAN22G0702 Fragaria x ananassa HOM05D006087 ORTHO05D007479 5.2e-24 114.4 99 57.6
FAN12G1341 Fragaria x ananassa HOM05D006087 ORTHO05D007479 6.8e-24 114.0 99 57.6
FAN12G1854 Fragaria x ananassa HOM05D006087 ORTHO05D007479 6.8e-24 114.0 99 57.6
Rhsim12G0025700 Rhododendron simsii HOM05D006087 ORTHO05D007479 6.8e-24 114.0 103 66.0
RcHm_v2.0_Chr4g0430231 Rosa chinensis HOM05D006087 ORTHO05D007479 8.9e-24 113.6 99 58.6
CSS0016505 Camellia sinensis var. sinensis HOM05D006087 ORTHO05D007479 1.5e-23 112.8 87 73.6
CSS0027394 Camellia sinensis var. sinensis HOM05D006087 ORTHO05D007479 1.5e-23 112.8 87 73.6
Nitab4.5_0001808g0020 Nicotiana tabacum HOM05D006087 ORTHO05D007479 1.5e-23 112.8 99 59.6
PSO017G6027 Papaver somniferum HOM05D006087 ORTHO05D007479 2.0e-23 112.5 100 57.0
PSO478G2574 Papaver somniferum HOM05D006087 ORTHO05D007479 2.0e-23 112.5 100 57.0
Nitab4.5_0000039g0180 Nicotiana tabacum HOM05D006087 ORTHO05D007479 4.4e-23 111.3 99 59.6
EL10Ac6g13503 Beta vulgaris HOM05D006087 ORTHO05D007479 5.7e-23 110.9 97 59.8
CAN.G163.9 Capsicum annuum HOM05D006087 ORTHO05D007479 5.7e-23 110.9 104 56.7
Sed0007875 Sechium edule HOM05D006087 ORTHO05D007479 1.7e-22 109.4 99 61.6
Aqoxy5G03370 Aquilegia oxysepala HOM05D006087 ORTHO05D007479 2.8e-22 108.6 96 62.5
Duzib268G0474 Durio zibethinus HOM05D006087 ORTHO05D007479 2.8e-22 108.6 101 62.4
Prupe.1G225600 Prunus persica HOM05D006087 ORTHO05D007479 3.7e-22 108.2 101 58.4
THA.LOC104807129 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 4.9e-22 107.8 105 58.1
MBI11_g44422_MAGBIO Magnolia biondii HOM05D006087 ORTHO05D007479 8.3e-22 107.1 102 70.6
THA.LOC104825505 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 1.1e-21 106.7 105 56.2
AUR62005621 Chenopodium quinoa HOM05D006087 ORTHO05D007479 1.4e-21 106.3 101 63.4
ATR0561G204 Amborella trichopoda HOM05D006087 ORTHO05D007479 1.8e-21 105.9 100 63.0
ECA234G0111 Erigeron canadensis HOM05D006087 ORTHO05D007479 1.8e-21 105.9 89 57.3
HanXRQChr10g0310621 Helianthus annuus HOM05D006087 ORTHO05D007479 1.8e-21 105.9 100 55.0
AUR62028927 Chenopodium quinoa HOM05D006087 ORTHO05D007479 4.1e-21 104.8 101 63.4
CDE02G3899 Ceratophyllum demersum HOM05D006087 ORTHO05D007479 7.0e-21 104.0 100 54.0
Migut.E00016 Erythranthe guttata HOM05D006087 ORTHO05D007479 3.5e-20 101.7 104 59.6
ClCG08G017160 Citrullus lanatus HOM05D006087 ORTHO05D007479 4.5e-20 101.3 99 61.6
MELO3C010741.2 Cucumis melo HOM05D006087 ORTHO05D007479 1.3e-19 99.8 99 53.5
ECA233G2512 Erigeron canadensis HOM05D006443 ORTHO05D007797 1.1e-18 96.7 84 56.0
Pp3c22_5660 Physcomitrium patens HOM05D006087 ORTHO05D007479 2.3e-16 89.0 93 49.5
Mapoly0062s0032 Marchantia polymorpha HOM05D006087 ORTHO05D007479 4.0e-16 88.2 90 51.1
Pp3c18_21810 Physcomitrium patens HOM05D006087 ORTHO05D007479 5.2e-16 87.8 93 50.5
CsaV3_2G025430 Cucumis sativus L. HOM05D006087 ORTHO05D007479 3.4e-15 85.1 82 62.2
Pp3c21_520 Physcomitrium patens HOM05D006087 ORTHO05D007479 1.7e-14 82.8 94 44.7
MD05G1114700 Malus domestica HOM05D006087 ORTHO05D007479 2.9e-14 82.0 83 54.2
HPP92_024290 Vanilla planifolia HOM05D006087 ORTHO05D007479 3.7e-14 81.6 93 49.5
MBI11_g05327_MAGBIO Magnolia biondii HOM05D006087 ORTHO05D007479 1.4e-13 79.7 84 57.1
Hma1.2p1_0349F.1_g132260 Hydrangea macrophylla HOM05D006087 ORTHO05D007479 1.8e-13 79.3 102 49.0
Pp3c14_11460 Physcomitrium patens HOM05D006087 ORTHO05D007479 1.8e-13 79.3 103 44.7
HPP92_024307 Vanilla planifolia HOM05D006087 ORTHO05D007479 2.4e-13 79.0 94 48.9
Os02g0506600 Oryza sativa ssp. japonica HOM05D006087 ORTHO05D007479 4.1e-13 78.2 100 53.0
Zm00001eb180950 Zea mays HOM05D006087 ORTHO05D007479 1.2e-12 76.6 100 48.0
Zm00001eb241730 Zea mays HOM05D006087 ORTHO05D007479 7.8e-12 73.9 95 47.4
Pp3c17_7480 Physcomitrium patens HOM05D006087 ORTHO05D007479 9.5e-10 67.0 110 35.5


User provided reference genes

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