Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.1WVB8B Arachis hypogaea HOM05D003319 ORTHO05D003739 1.0e-82 310.1 159 100.0
arahy.Tifrunner.gnm1.ann1.S3SE83 Arachis hypogaea HOM05D003319 ORTHO05D003739 3.4e-54 215.3 139 84.2
arahy.Tifrunner.gnm1.ann1.J3DRUP Arachis hypogaea HOM05D003319 ORTHO05D003739 4.4e-54 214.9 139 84.2
arahy.Tifrunner.gnm1.ann1.30MVJR Arachis hypogaea HOM05D003319 ORTHO05D003739 3.0e-42 175.6 99 85.9
Lj1g0027025 Lotus japonicus HOM05D003319 ORTHO05D003739 1.3e-34 150.2 140 56.4
Glyma.04G095300 Glycine max HOM05D003319 ORTHO05D003739 3.9e-34 148.7 136 58.1
Glyma.06G097100 Glycine max HOM05D003319 ORTHO05D003739 1.1e-33 147.1 136 57.4
Ca_23436_v3 Cicer arietinum L. HOM05D003319 ORTHO05D003739 1.9e-33 146.4 140 57.1
Ca_29526_v3 Cicer arietinum L. HOM05D003319 ORTHO05D003739 1.9e-33 146.4 146 56.8
arahy.Tifrunner.gnm1.ann1.53Z6YZ Arachis hypogaea HOM05D003319 ORTHO05D003739 7.3e-33 144.4 136 57.4
Psat5g049040 Pisum sativum HOM05D003319 ORTHO05D003739 1.6e-32 143.3 140 54.3
arahy.Tifrunner.gnm1.ann1.ET429J Arachis hypogaea HOM05D003319 ORTHO05D003739 3.6e-32 142.1 124 59.7
TPR.G6339 Trifolium pratense HOM05D003319 ORTHO05D003739 1.1e-31 140.6 136 55.9
Medtr3g100180 Medicago truncatula HOM05D003319 ORTHO05D003739 3.1e-31 139.0 136 55.1
Phvul.009G036300 Phaseolus vulgaris HOM05D003319 ORTHO05D003739 1.5e-30 136.7 138 55.1
Lalb_Chr23g0270031 Lupinus albus HOM05D003319 ORTHO05D003739 2.0e-30 136.3 159 50.9
VMungo1309G1101 Vigna mungo HOM05D003319 ORTHO05D003739 2.9e-29 132.5 138 53.6
Lalb_Chr11g0064951 Lupinus albus HOM05D003319 ORTHO05D003739 9.2e-28 127.5 126 54.8
Lalb_Chr08g0242551 Lupinus albus HOM05D003319 ORTHO05D003739 3.9e-26 122.1 139 51.1
Medtr8g024690 Medicago truncatula HOM05D003319 ORTHO05D003739 6.6e-26 121.3 136 48.5
Glyma.02G214600 Glycine max HOM05D003319 ORTHO05D003739 3.8e-21 105.5 137 44.5
Phvul.008G182100 Phaseolus vulgaris HOM05D003319 ORTHO05D003739 3.2e-20 102.4 134 44.0
arahy.Tifrunner.gnm1.ann1.CZ6CK7 Arachis hypogaea HOM05D003319 ORTHO05D003739 9.6e-17 90.9 52 82.7
VMungo0647G1715 Vigna mungo HOM05D003319 ORTHO05D003739 1.4e-15 87.0 122 43.4
ClCG11G014590 Citrullus lanatus HOM05D003319 ORTHO05D003739 9.9e-14 80.9 152 36.8
Atru.chr13.1006 Acer truncatum HOM05D003319 ORTHO05D003739 4.9e-13 78.6 132 37.9
Cfa009865 Carpinus fangiana HOM05D003319 ORTHO05D003739 6.4e-13 78.2 129 36.4
TAR628G1108 Trochodendron aralioides HOM05D003319 ORTHO05D003739 8.4e-13 77.8 129 34.9
Eucgr.F02154 Eucalyptus grandis HOM05D003319 ORTHO05D003739 1.1e-12 77.4 145 37.9
Sed0024254 Sechium edule HOM05D003319 ORTHO05D003739 3.2e-12 75.9 130 39.2
Haze_23237 Corylus avellana HOM05D003319 ORTHO05D003739 5.4e-12 75.1 129 35.7
Sc26g0002970 Simmondsia chinensis HOM05D003319 ORTHO05D003739 5.4e-12 75.1 148 35.8
CiPaw.07G165000 Carya illinoinensis HOM05D003319 ORTHO05D003739 1.6e-11 73.6 134 35.8
MBI16_g19592_MAGBIO Magnolia biondii HOM05D003319 ORTHO05D003739 1.6e-11 73.6 130 33.8
Thecc.08G071400 Theobroma cacao HOM05D003319 ORTHO05D003739 1.6e-11 73.6 132 35.6
Ciclev10000622m.g Citrus clementina HOM05D003319 ORTHO05D003739 2.1e-11 73.2 150 36.7
TAR376G1177 Trochodendron aralioides HOM05D003319 ORTHO05D003739 2.1e-11 73.2 129 33.3
CsaV3_3G048000 Cucumis sativus L. HOM05D003319 ORTHO05D003739 2.7e-11 72.8 129 38.8
Psat2g065280 Pisum sativum HOM05D003319 ORTHO05D003739 3.5e-11 72.4 137 35.8
CANSAT35G1730 Cannabis sativa HOM05D003319 ORTHO05D003739 4.6e-11 72.0 152 36.2
Duzib041G0541 Durio zibethinus HOM05D003319 ORTHO05D003739 4.6e-11 72.0 131 35.1
Rhsim07G0212100 Rhododendron simsii HOM05D003319 ORTHO05D003739 7.9e-11 71.2 119 37.0
CiPaw.08G055800 Carya illinoinensis HOM05D003319 ORTHO05D003739 1.0e-10 70.9 135 36.3
COL.COLO4_35252 Corchorus olitorius HOM05D001049 ORTHO05D001986 1.0e-10 70.9 132 31.8
Dinv42609 Davidia involucrata HOM05D003319 ORTHO05D003739 1.0e-10 70.9 131 35.9
CiPaw.14G112200 Carya illinoinensis HOM05D003319 ORTHO05D003739 1.3e-10 70.5 131 32.8
Manes.02G144600 Manihot esculenta HOM05D003319 ORTHO05D003739 1.3e-10 70.5 130 32.3
TPR.G35908 Trifolium pratense HOM05D003319 ORTHO05D003739 1.3e-10 70.5 131 33.6
Cpa.g.sc21.26 Carica papaya HOM05D003319 ORTHO05D003739 1.7e-10 70.1 152 34.9
vmacro04648 Vaccinium macrocarpon HOM05D003319 ORTHO05D003739 1.7e-10 70.1 128 36.7
MELO3C003521.2 Cucumis melo HOM05D003319 ORTHO05D003739 2.3e-10 69.7 129 35.7
Cfa013800 Carpinus fangiana HOM05D003319 ORTHO05D003739 3.9e-10 68.9 150 32.0
Dinv44863 Davidia involucrata HOM05D001049 ORTHO05D001986 6.6e-10 68.2 119 36.1
Duzib093G0230 Durio zibethinus HOM05D003319 ORTHO05D003739 6.6e-10 68.2 131 33.6
Haze_22463 Corylus avellana HOM05D003319 ORTHO05D003739 1.1e-09 67.4 150 31.3
FAN08G0387 Fragaria x ananassa HOM05D003319 ORTHO05D003739 1.1e-09 67.4 152 34.2
Nn1g05581 Nelumbo nucifera HOM05D003319 ORTHO05D003739 1.1e-09 67.4 127 35.4
Sabra05G0119500 Salix brachista HOM05D003319 ORTHO05D003739 1.1e-09 67.4 129 36.4
Manes.18G058300 Manihot esculenta HOM05D003319 ORTHO05D003739 1.5e-09 67.0 136 32.4
PSO210G3859 Papaver somniferum HOM05D003319 ORTHO05D003739 1.9e-09 66.6 134 32.1
RcHm_v2.0_Chr7g0235501 Rosa chinensis HOM05D003319 ORTHO05D003739 2.5e-09 66.2 139 37.4
FvH4_5g34820 Fragaria vesca HOM05D003319 ORTHO05D003739 3.3e-09 65.9 152 33.6
Solyc12g087970.2 Solanum lycopersicum HOM05D003319 ORTHO05D003739 3.3e-09 65.9 128 34.4
TWI56G0998 Tripterygium wilfordii HOM05D003319 ORTHO05D003739 3.3e-09 65.9 150 33.3
Nitab4.5_0000354g0150 Nicotiana tabacum HOM05D003319 ORTHO05D003739 4.3e-09 65.5 128 33.6
Sopen12g030000 Solanum pennellii HOM05D003319 ORTHO05D003739 4.3e-09 65.5 128 34.4
SHI20380 Sapria himalayana HOM05D003319 ORTHO05D003739 5.6e-09 65.1 127 33.1
Lj4A737G58 Lonicera japonica HOM05D003319 ORTHO05D003739 7.3e-09 64.7 131 32.8
QL09p017848 Quercus lobata HOM05D003319 ORTHO05D003739 7.3e-09 64.7 133 33.8
ATR0582G130 Amborella trichopoda HOM05D003319 ORTHO05D003739 9.6e-09 64.3 159 34.6
CSS0018207 Camellia sinensis var. sinensis HOM05D003319 ORTHO05D003739 9.6e-09 64.3 126 33.3
arahy.Tifrunner.gnm1.ann1.G0HK4C Arachis hypogaea HOM05D000558 ORTHO05D001857 1.3e-08 63.9 40 67.5
Nitab4.5_0001607g0150 Nicotiana tabacum HOM05D003319 ORTHO05D003739 1.3e-08 63.9 128 32.0
Nitab4.5_0005913g0020 Nicotiana tabacum HOM05D003319 ORTHO05D003739 1.3e-08 63.9 137 33.6
GSVIVG01009184001 Vitis vinifera HOM05D003319 ORTHO05D003739 1.3e-08 63.9 146 31.5
FAN18G0012 Fragaria x ananassa HOM05D003319 ORTHO05D003739 1.6e-08 63.5 128 35.9
Hma1.2p1_0010F.1_g006630 Hydrangea macrophylla HOM05D003319 ORTHO05D003739 2.1e-08 63.2 129 33.3
Nitab4.5_0000131g0210 Nicotiana tabacum HOM05D003319 ORTHO05D003739 2.1e-08 63.2 137 33.6
Potri.002G106500 Populus trichocarpa HOM05D003319 ORTHO05D003739 2.1e-08 63.2 146 33.6
SEGI_24455 Sequoiadendron giganteum HOM05D003319 ORTHO05D003739 2.1e-08 63.2 143 38.5
Lsat_1_v5_gn_9_74001 Lactuca sativa HOM05D003319 ORTHO05D003739 2.8e-08 62.8 125 32.8
QL01p017023 Quercus lobata HOM05D003319 ORTHO05D003739 2.8e-08 62.8 124 36.3
TWI36G0459 Tripterygium wilfordii HOM05D003319 ORTHO05D003739 3.6e-08 62.4 150 33.3
DCAR_012853 Daucus carota HOM05D003319 ORTHO05D003739 4.8e-08 62.0 146 29.5
ECA232G2539 Erigeron canadensis HOM05D001083 ORTHO05D001637 8.1e-08 61.2 126 34.9
MSTRG.11807 Avicennia marina HOM05D003319 ORTHO05D003739 1.1e-07 60.8 130 30.0
MD15G1386000 Malus domestica HOM05D003319 ORTHO05D003739 1.8e-07 60.1 126 34.1
Peaxi162Scf00454g00323 Petunia axillaris HOM05D003319 ORTHO05D003739 1.8e-07 60.1 138 31.2
CARHR009680 Cardamine hirsuta HOM05D003319 ORTHO05D003739 2.4e-07 59.7 128 33.6
FAN04G1055 Fragaria x ananassa HOM05D003319 ORTHO05D003739 3.1e-07 59.3 152 32.9
Oeu018565.2 Olea europaea HOM05D003319 ORTHO05D003739 3.1e-07 59.3 130 31.5
Sabra02G0083800 Salix brachista HOM05D003319 ORTHO05D003739 3.1e-07 59.3 151 33.1
FAN13G1335 Fragaria x ananassa HOM05D003319 ORTHO05D003739 4.0e-07 58.9 155 32.9
Lj4A88T36 Lonicera japonica HOM05D003319 ORTHO05D003739 4.0e-07 58.9 105 33.3
CAN.G806.11 Capsicum annuum HOM05D003319 ORTHO05D003739 6.9e-07 58.2 128 32.0
CDE05G3064 Ceratophyllum demersum HOM05D003319 ORTHO05D003739 2.6e-06 56.2 123 32.5
MD08G1198900 Malus domestica HOM05D003319 ORTHO05D003739 2.6e-06 56.2 147 31.3
Aa31LG1G5280 Aethionema arabicum HOM05D003319 ORTHO05D003739 4.5e-06 55.5 130 35.4
Sopen00g008100 Solanum pennellii HOM05D003319 ORTHO05D003739 4.5e-06 55.5 130 32.3
Solyc04g076360.4 Solanum lycopersicum HOM05D003319 ORTHO05D003739 5.8e-06 55.1 130 32.3
CDE11G0791 Ceratophyllum demersum HOM05D003319 ORTHO05D003739 7.6e-06 54.7 140 31.4


User provided reference genes

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