Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.1WC97K Arachis hypogaea HOM05D006801 ORTHO05D008490 9.5e-103 376.7 173 100.0
arahy.Tifrunner.gnm1.ann1.M4T34S Arachis hypogaea HOM05D006801 ORTHO05D008490 3.9e-72 275.0 133 94.7
VMungo0331G1841 Vigna mungo HOM05D006801 ORTHO05D008490 1.3e-48 196.8 133 69.2
Lj3g0026162 Lotus japonicus HOM05D006801 ORTHO05D008490 8.7e-48 194.1 133 69.2
Medtr4g017680 Medicago truncatula HOM05D006801 ORTHO05D008490 1.9e-47 193.0 133 68.4
Lalb_Chr12g0207091 Lupinus albus HOM05D006801 ORTHO05D008490 1.3e-46 190.3 133 69.9
TWI74G0346 Tripterygium wilfordii HOM05D006801 ORTHO05D008490 5.3e-37 158.3 132 58.3
Prupe.6G281700 Prunus persica HOM05D006801 ORTHO05D008490 1.5e-36 156.8 131 59.5
Ciclev10012687m.g Citrus clementina HOM05D006801 ORTHO05D008490 5.9e-36 154.8 132 59.8
MD04G1161900 Malus domestica HOM05D006801 ORTHO05D008490 6.5e-35 151.4 131 58.8
Cpa.g.sc120.28 Carica papaya HOM05D006801 ORTHO05D008490 5.5e-34 148.3 130 57.7
arahy.Tifrunner.gnm1.ann1.711CF1 Arachis hypogaea HOM05D006801 ORTHO05D008490 7.2e-34 147.9 130 58.5
Cc06_g01030 Coffea canephora HOM05D006801 ORTHO05D008490 7.2e-34 147.9 130 56.2
Haze_21041 Corylus avellana HOM05D006801 ORTHO05D008490 9.4e-34 147.5 132 58.3
Atru.chr8.2288 Acer truncatum HOM05D006801 ORTHO05D008490 1.6e-33 146.7 132 56.1
arahy.Tifrunner.gnm1.ann1.SWS1EB Arachis hypogaea HOM05D006801 ORTHO05D008490 1.6e-33 146.7 130 57.7
TAR140G0003 Trochodendron aralioides HOM05D006801 ORTHO05D008490 1.6e-33 146.7 132 57.6
TAR623G0428 Trochodendron aralioides HOM05D006801 ORTHO05D008490 1.6e-33 146.7 132 57.6
Potri.016G121000 Populus trichocarpa HOM05D006801 ORTHO05D008490 3.6e-33 145.6 130 56.2
QL07p034435 Quercus lobata HOM05D006801 ORTHO05D008490 7.9e-33 144.4 132 56.8
Lj2A70T41 Lonicera japonica HOM05D006801 ORTHO05D008490 1.4e-32 143.7 130 56.2
TPR.G8225 Trifolium pratense HOM05D006801 ORTHO05D008490 1.4e-32 143.7 130 57.7
Lj3g0017579 Lotus japonicus HOM05D006801 ORTHO05D008490 1.8e-32 143.3 130 53.8
Psat7g243680 Pisum sativum HOM05D006801 ORTHO05D008490 5.1e-32 141.7 130 53.8
THA.LOC104816206 Tarenaya hassleriana HOM05D006801 ORTHO05D008490 6.7e-32 141.4 132 56.1
Manes.09G108600 Manihot esculenta HOM05D006801 ORTHO05D008490 8.8e-32 141.0 130 54.6
CiPaw.10G158900 Carya illinoinensis HOM05D006801 ORTHO05D008490 1.1e-31 140.6 132 54.5
Ca_20198_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 1.5e-31 140.2 130 53.8
Gohir.A04G094200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 1.5e-31 140.2 129 55.8
Cfa017164 Carpinus fangiana HOM05D006801 ORTHO05D008490 2.6e-31 139.4 132 56.1
Gorai.012G117400 Gossypium raimondii HOM05D006801 ORTHO05D008490 2.6e-31 139.4 129 55.8
Nn2g13198 Nelumbo nucifera HOM05D006801 ORTHO05D008490 2.6e-31 139.4 133 53.4
Medtr4g017650 Medicago truncatula HOM05D006801 ORTHO05D008490 5.7e-31 138.3 130 56.2
Gohir.D04G133600 Gossypium hirsutum HOM05D006801 ORTHO05D008490 1.3e-30 137.1 129 55.0
CAN.G41.4 Capsicum annuum HOM05D006801 ORTHO05D008490 2.2e-30 136.3 130 53.8
GSVIVG01030332001 Vitis vinifera HOM05D006801 ORTHO05D008490 2.2e-30 136.3 132 53.0
Oeu033563.1 Olea europaea HOM05D006801 ORTHO05D008490 2.8e-30 136.0 130 53.8
COL.COLO4_14495 Corchorus olitorius HOM05D006801 ORTHO05D008490 3.7e-30 135.6 129 55.0
Glyma.03G052200 Glycine max HOM05D006801 ORTHO05D008490 8.2e-30 134.4 130 53.8
Aa31LG1G22920 Aethionema arabicum HOM05D006801 ORTHO05D008490 1.1e-29 134.0 132 54.5
Gorai.002G264900 Gossypium raimondii HOM05D006801 ORTHO05D008490 1.4e-29 133.7 131 50.4
Sp6g40620 Schrenkiella parvula HOM05D006801 ORTHO05D008490 1.4e-29 133.7 131 54.2
Thecc.05G010700 Theobroma cacao HOM05D006801 ORTHO05D008490 1.4e-29 133.7 129 54.3
Nitab4.5_0005348g0010 Nicotiana tabacum HOM05D006801 ORTHO05D008490 1.8e-29 133.3 131 54.2
Sc01g0005740 Simmondsia chinensis HOM05D006801 ORTHO05D008490 1.8e-29 133.3 129 54.3
VMungo0331G1898 Vigna mungo HOM05D006801 ORTHO05D008490 2.4e-29 132.9 130 53.8
C09p74590 Brassica napus HOM05D005640 ORTHO05D007124 3.1e-29 132.5 132 53.8
BraA10t45402Z Brassica rapa HOM05D006801 ORTHO05D008490 3.1e-29 132.5 132 53.8
Os05g0468800 Oryza sativa ssp. japonica HOM05D006801 ORTHO05D008490 7.0e-29 131.3 132 51.5
AL6G10870 Arabidopsis lyrata HOM05D006801 ORTHO05D008490 9.1e-29 131.0 132 51.5
CARHR211660 Cardamine hirsuta HOM05D006801 ORTHO05D008490 9.1e-29 131.0 132 51.5
CANSAT35G1909 Cannabis sativa HOM05D006801 ORTHO05D008490 1.2e-28 130.6 130 50.0
FvH4_6g11060 Fragaria vesca HOM05D006801 ORTHO05D008490 1.2e-28 130.6 131 51.9
FAN14G3154 Fragaria x ananassa HOM05D006801 ORTHO05D008490 1.2e-28 130.6 131 51.9
Peaxi162Scf01132g00023 Petunia axillaris HOM05D006801 ORTHO05D008490 1.2e-28 130.6 131 52.7
BcaC06g31972 Brassica carinata HOM05D006801 ORTHO05D008490 1.5e-28 130.2 131 53.4
Glyma.01G123100 Glycine max HOM05D006801 ORTHO05D008490 1.5e-28 130.2 130 52.3
Gohir.A01G228300 Gossypium hirsutum HOM05D006801 ORTHO05D008490 1.5e-28 130.2 131 50.4
Phvul.010G073500 Phaseolus vulgaris HOM05D006801 ORTHO05D008490 1.5e-28 130.2 130 53.8
RcHm_v2.0_Chr3g0462371 Rosa chinensis HOM05D006801 ORTHO05D008490 2.0e-28 129.8 131 51.9
A10p33680 Brassica napus HOM05D005640 ORTHO05D007124 2.6e-28 129.4 132 53.0
Lsat_1_v5_gn_9_35501 Lactuca sativa HOM05D006801 ORTHO05D008490 2.6e-28 129.4 131 49.6
MSTRG.18989 Avicennia marina HOM05D006801 ORTHO05D008490 4.5e-28 128.6 130 52.3
FAN09G2180 Fragaria x ananassa HOM05D006801 ORTHO05D008490 4.5e-28 128.6 131 51.1
Lalb_Chr07g0191271 Lupinus albus HOM05D006801 ORTHO05D008490 4.5e-28 128.6 130 52.3
MBI15_g30116_MAGBIO Magnolia biondii HOM05D006801 ORTHO05D008490 4.5e-28 128.6 132 54.5
Aqoxy4G02453 Aquilegia oxysepala HOM05D006801 ORTHO05D008490 5.9e-28 128.3 132 51.5
DCAR_028865 Daucus carota HOM05D006801 ORTHO05D008490 7.7e-28 127.9 131 51.9
HanXRQChr10g0291491 Helianthus annuus HOM05D006801 ORTHO05D008490 7.7e-28 127.9 131 51.1
Eucgr.A00595 Eucalyptus grandis HOM05D006801 ORTHO05D008490 1.0e-27 127.5 132 50.8
AT5G01300 Arabidopsis thaliana HOM05D006801 ORTHO05D008490 1.3e-27 127.1 132 50.8
Lalb_Chr12g0207061 Lupinus albus HOM05D006801 ORTHO05D008490 1.7e-27 126.7 130 52.3
AUR62030790 Chenopodium quinoa HOM05D006801 ORTHO05D008490 3.8e-27 125.6 130 51.5
SalBow5G2624 Salvia bowleyana HOM05D006801 ORTHO05D008490 6.5e-27 124.8 131 50.4
Nitab4.5_0000539g0120 Nicotiana tabacum HOM05D006801 ORTHO05D008490 1.1e-26 124.0 129 51.9
SGA_v2.0_scaffold85G26712 Striga asiatica HOM05D000053 ORTHO05D008490 1.1e-26 124.0 129 49.6
AUR62030503 Chenopodium quinoa HOM05D006801 ORTHO05D008490 1.5e-26 123.6 130 50.8
Migut.J00126 Erythranthe guttata HOM05D006801 ORTHO05D008490 1.5e-26 123.6 131 48.9
PGR031G3867 Punica granatum HOM05D006801 ORTHO05D008490 1.5e-26 123.6 132 50.8
SalBow5G4248 Salvia bowleyana HOM05D006801 ORTHO05D008490 1.5e-26 123.6 131 50.4
Carub.0006s0052 Capsella rubella HOM05D006801 ORTHO05D008490 2.5e-26 122.9 131 48.9
Sopen09g001050 Solanum pennellii HOM05D006801 ORTHO05D008490 2.5e-26 122.9 131 51.9
Solyc09g005060.3 Solanum lycopersicum HOM05D006801 ORTHO05D008490 3.2e-26 122.5 131 51.9
Ah.12g058900 Amaranthus hybridus HOM05D006801 ORTHO05D008490 9.4e-26 120.9 129 51.2
PSO170G1048 Papaver somniferum HOM05D006801 ORTHO05D008490 2.1e-25 119.8 132 49.2
EL10Ac5g12521 Beta vulgaris HOM05D006801 ORTHO05D008490 2.7e-25 119.4 130 50.0
CsaV3_3G033500 Cucumis sativus L. HOM05D006801 ORTHO05D008490 2.7e-25 119.4 128 49.2
ClCG10G022380 Citrullus lanatus HOM05D006801 ORTHO05D008490 3.6e-25 119.0 130 49.2
Ca_20197_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 8.0e-25 117.9 133 48.9
MELO3C009141.2 Cucumis melo HOM05D006801 ORTHO05D008490 1.0e-24 117.5 128 48.4
ECA247G2271 Erigeron canadensis HOM05D006801 ORTHO05D008490 3.0e-24 115.9 131 48.1
ECA247G3879 Erigeron canadensis HOM05D006801 ORTHO05D008490 5.2e-24 115.2 131 45.8
Zm00001eb351790 Zea mays HOM05D006801 ORTHO05D008490 8.8e-24 114.4 111 51.4
HPP92_015418 Vanilla planifolia HOM05D006801 ORTHO05D008490 1.1e-23 114.0 133 46.6
Thhalv10014869m.g Eutrema salsugineum HOM05D006801 ORTHO05D008490 1.5e-23 113.6 131 49.6
HPP92_026978 Vanilla planifolia HOM05D006801 ORTHO05D008490 2.6e-23 112.8 133 46.6
AagrBONN_evm.TU.Sc2ySwM_228.3494 Anthoceros agrestis HOM05D006801 ORTHO05D008490 3.3e-23 112.5 126 46.0
PSO729G0120 Papaver somniferum HOM05D006801 ORTHO05D008490 3.3e-23 112.5 132 48.5
CSS0028234 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 4.4e-23 112.1 131 48.9
Sed0001867 Sechium edule HOM05D006801 ORTHO05D008490 1.7e-22 110.2 130 46.2
SEGI_01937 Sequoiadendron giganteum HOM05D006801 ORTHO05D008490 2.8e-22 109.4 130 43.8
Pp3c1_41520 Physcomitrium patens HOM05D006801 ORTHO05D008490 2.0e-20 103.2 106 48.1
PSO724G0025 Papaver somniferum HOM05D006801 ORTHO05D008490 3.5e-20 102.4 132 47.0
PSO729G0014 Papaver somniferum HOM05D006801 ORTHO05D008490 3.5e-20 102.4 132 47.0
unitig_26.g9083 Utricularia gibba HOM05D006801 ORTHO05D008490 3.5e-20 102.4 131 44.3
CSS0011838 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 4.5e-20 102.1 130 43.8
Mapoly0003s0041 Marchantia polymorpha HOM05D006801 ORTHO05D008490 4.5e-20 102.1 127 41.7
SMO347G0428 Selaginella moellendorffii HOM05D006801 ORTHO05D008490 9.4e-18 94.4 127 40.2
Pp3c21_8040 Physcomitrium patens HOM05D006801 ORTHO05D008490 1.8e-16 90.1 122 41.8
CBR_g39562 Chara braunii HOM05D006801 ORTHO05D008490 4.0e-16 89.0 130 36.9
Dinv18520 Davidia involucrata HOM05D006801 ORTHO05D008490 2.6e-15 86.3 82 51.2
CDE08G0176 Ceratophyllum demersum HOM05D006801 ORTHO05D008490 4.4e-15 85.5 108 45.4
Gohir.D01G218200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 1.8e-13 80.1 78 48.7
Hma1.2p1_0501F.1_g167640 Hydrangea macrophylla HOM05D006801 ORTHO05D008490 1.0e-11 74.3 112 37.5
ATR0681G235 Amborella trichopoda HOM05D006801 ORTHO05D008490 1.5e-07 60.5 51 52.9
PGSC0003DMG400006267 Solanum tuberosum HOM05D006801 ORTHO05D008490 9.8e-07 57.8 44 59.1


User provided reference genes

Program Settings