Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.1UM3HH Arachis hypogaea HOM05D000097 ORTHO05D000041 7.4e-36 153.7 98 100.0
arahy.Tifrunner.gnm1.ann1.BSV0EW Arachis hypogaea HOM05D000097 ORTHO05D000041 1.3e-24 116.3 63 88.9
Lalb_Chr18g0052271 Lupinus albus HOM05D000097 ORTHO05D000041 9.8e-12 73.6 62 54.8
TPR.G5788 Trifolium pratense HOM05D000097 ORTHO05D000041 1.6e-09 66.2 59 55.9
Glyma.15G160700 Glycine max HOM05D000097 ORTHO05D000041 5.9e-09 64.3 59 52.5
Glyma.09G054100 Glycine max HOM05D000097 ORTHO05D000041 1.0e-08 63.5 66 47.0
Glyma.15G160300 Glycine max HOM05D000097 ORTHO05D000041 1.0e-08 63.5 50 58.0
Glyma.09G054800 Glycine max HOM05D000097 ORTHO05D000041 3.8e-08 61.6 59 50.8
VMungo1309G3036 Vigna mungo HOM05D000097 ORTHO05D000041 3.8e-08 61.6 59 49.2
arahy.Tifrunner.gnm1.ann1.8H2R74 Arachis hypogaea HOM05D000097 ORTHO05D000041 5.0e-08 61.2 75 44.0
Phvul.009G240666 Phaseolus vulgaris HOM05D000097 ORTHO05D000041 6.5e-08 60.8 54 51.9
Glyma.09G053700 Glycine max HOM05D000097 ORTHO05D000041 8.5e-08 60.5 59 49.2
Medtr2g438700 Medicago truncatula HOM05D000097 ORTHO05D000041 8.5e-08 60.5 62 50.0
TPR.G5799 Trifolium pratense HOM05D000097 ORTHO05D000041 8.5e-08 60.5 54 48.1
FvH4_3g25081 Fragaria vesca HOM05D000097 ORTHO05D000041 1.5e-07 59.7 55 54.5
Medtr2g438640 Medicago truncatula HOM05D000097 ORTHO05D000041 1.9e-07 59.3 62 46.8
Medtr2g438740 Medicago truncatula HOM05D000097 ORTHO05D000041 1.9e-07 59.3 55 49.1
Phvul.009G240633 Phaseolus vulgaris HOM05D000097 ORTHO05D000041 2.5e-07 58.9 62 46.8
RcHm_v2.0_Chr5g0039341 Rosa chinensis HOM05D000097 ORTHO05D000041 2.5e-07 58.9 58 50.0
arahy.Tifrunner.gnm1.ann1.G8PY79 Arachis hypogaea HOM05D000097 ORTHO05D000041 3.2e-07 58.5 58 50.0
FAN21G2287 Fragaria x ananassa HOM05D000097 ORTHO05D000041 4.2e-07 58.2 55 54.5
Glyma.15G160400 Glycine max HOM05D000097 ORTHO05D000041 4.2e-07 58.2 65 40.0
Phvul.009G240677 Phaseolus vulgaris HOM05D000097 ORTHO05D000041 4.2e-07 58.2 59 50.8
VMungo1309G0433 Vigna mungo HOM05D000097 ORTHO05D000041 4.2e-07 58.2 59 47.5
FAN11G2397 Fragaria x ananassa HOM05D000097 ORTHO05D000041 5.5e-07 57.8 54 53.7
Phvul.009G240655 Phaseolus vulgaris HOM05D000097 ORTHO05D000041 5.5e-07 57.8 55 45.5
TPR.G5806 Trifolium pratense HOM05D000097 ORTHO05D000041 5.5e-07 57.8 55 50.9
arahy.Tifrunner.gnm1.ann1.YX4J0R Arachis hypogaea HOM05D000097 ORTHO05D000041 7.2e-07 57.4 62 46.8
Lj6g0002651 Lotus japonicus HOM05D000097 ORTHO05D000041 7.2e-07 57.4 58 43.1
VMungo1309G2315 Vigna mungo HOM05D000097 ORTHO05D000041 7.2e-07 57.4 65 44.6
Glyma.09G054000 Glycine max HOM05D000097 ORTHO05D000041 9.4e-07 57.0 57 47.4
Medtr2g438720 Medicago truncatula HOM05D000097 ORTHO05D000041 1.2e-06 56.6 62 46.8
Medtr2g438440 Medicago truncatula HOM05D000097 ORTHO05D000041 1.6e-06 56.2 59 47.5
RcHm_v2.0_Chr5g0045771 Rosa chinensis HOM05D000097 ORTHO05D000041 1.6e-06 56.2 62 48.4
arahy.Tifrunner.gnm1.ann1.TTJ70M Arachis hypogaea HOM05D000097 ORTHO05D000041 2.1e-06 55.8 62 45.2
Ca_02023_v3 Cicer arietinum L. HOM05D000097 ORTHO05D000041 2.1e-06 55.8 55 49.1
Glyma.15G160600 Glycine max HOM05D000097 ORTHO05D000041 2.1e-06 55.8 63 49.2
Lalb_Chr15g0083951 Lupinus albus HOM05D000097 ORTHO05D000041 2.1e-06 55.8 59 42.4
VMungo1309G0755 Vigna mungo HOM05D000097 ORTHO05D000041 2.1e-06 55.8 59 49.2
Psat1g148280 Pisum sativum HOM05D000097 ORTHO05D000041 2.7e-06 55.5 62 45.2
RcHm_v2.0_Chr5g0045421 Rosa chinensis HOM05D000097 ORTHO05D000041 2.7e-06 55.5 62 43.5
arahy.Tifrunner.gnm1.ann1.06VYCT Arachis hypogaea HOM05D000097 ORTHO05D000041 4.7e-06 54.7 65 44.6
Medtr2g438400 Medicago truncatula HOM05D000097 ORTHO05D000041 4.7e-06 54.7 60 46.7
RcHm_v2.0_Chr5g0045551 Rosa chinensis HOM05D000097 ORTHO05D000041 4.7e-06 54.7 55 52.7
arahy.Tifrunner.gnm1.ann1.41TE98 Arachis hypogaea HOM05D000097 ORTHO05D000041 6.1e-06 54.3 59 47.5
arahy.Tifrunner.gnm1.ann1.4YMK55 Arachis hypogaea HOM05D000097 ORTHO05D000041 6.1e-06 54.3 59 44.1
Medtr2g438760 Medicago truncatula HOM05D000097 ORTHO05D000041 8.0e-06 53.9 59 42.4


User provided reference genes

Program Settings