Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.1SX7LU Arachis hypogaea HOM05D005479 ORTHO05D019704 1.1e-30 136.0 69 100.0
arahy.Tifrunner.gnm1.ann1.9C3ED3 Arachis hypogaea HOM05D005479 ORTHO05D007756 2.1e-24 115.2 86 74.4
arahy.Tifrunner.gnm1.ann1.A0PUBP Arachis hypogaea HOM05D005479 ORTHO05D007756 1.7e-23 112.1 86 73.3
Lj1g0002084 Lotus japonicus HOM05D005479 ORTHO05D007756 1.5e-14 82.4 83 56.6
TPR.G7013 Trifolium pratense HOM05D005479 ORTHO05D007756 7.3e-14 80.1 83 55.4
Medtr7g114940 Medicago truncatula HOM05D005479 ORTHO05D007756 4.8e-13 77.4 83 54.2
Ca_09415_v3 Cicer arietinum L. HOM05D005479 ORTHO05D007756 2.4e-12 75.1 77 58.4
Lalb_Chr15g0076821 Lupinus albus HOM05D005479 ORTHO05D007756 4.5e-11 70.9 82 53.7
Psat3g007760 Pisum sativum HOM05D005479 ORTHO05D007756 4.5e-11 70.9 74 55.4
VMungo0540G0884 Vigna mungo HOM05D005479 ORTHO05D007756 1.3e-10 69.3 81 49.4
Glyma.19G243900 Glycine max HOM05D005479 ORTHO05D007756 1.7e-10 68.9 81 49.4
CSS0032146 Camellia sinensis var. sinensis HOM05D005479 ORTHO05D007756 3.8e-10 67.8 75 50.7
arahy.Tifrunner.gnm1.ann1.FJ07HR Arachis hypogaea HOM05D004812 ORTHO05D005721 4.9e-10 67.4 62 61.3
CiPaw.07G065500 Carya illinoinensis HOM05D005479 ORTHO05D007756 1.1e-09 66.2 79 50.6
Lsat_1_v5_gn_4_140660 Lactuca sativa HOM05D005479 ORTHO05D007756 1.1e-09 66.2 84 42.9
Glyma.03G246500 Glycine max HOM05D005479 ORTHO05D007756 1.4e-09 65.9 81 48.1
HanXRQChr09g0254821 Helianthus annuus HOM05D005479 ORTHO05D007756 1.9e-09 65.5 75 49.3
Phvul.006G100800 Phaseolus vulgaris HOM05D005479 ORTHO05D007756 3.2e-09 64.7 74 48.6
QL03p025023 Quercus lobata HOM05D005479 ORTHO05D007756 7.1e-09 63.5 90 42.2
Haze_04347 Corylus avellana HOM05D005479 ORTHO05D007756 9.3e-09 63.2 84 42.9
CAN.G134.108 Capsicum annuum HOM05D005479 ORTHO05D007756 2.7e-08 61.6 72 47.2
Eucgr.H04378 Eucalyptus grandis HOM05D005479 ORTHO05D007756 2.7e-08 61.6 75 44.0
Nitab4.5_0004469g0060 Nicotiana tabacum HOM05D005479 ORTHO05D007756 4.6e-08 60.8 74 44.6
Peaxi162Scf00282g00225 Petunia axillaris HOM05D005479 ORTHO05D007756 4.6e-08 60.8 72 48.6
Dinv20863 Davidia involucrata HOM05D005479 ORTHO05D007756 7.9e-08 60.1 75 48.0
FAN02G1208 Fragaria x ananassa HOM05D000352 ORTHO05D000260 7.9e-08 60.1 81 45.7
EL10Ac4g09118 Beta vulgaris HOM05D005479 ORTHO05D007756 1.0e-07 59.7 82 41.5
Nitab4.5_0005582g0060 Nicotiana tabacum HOM05D005479 ORTHO05D019704 1.0e-07 59.7 76 42.1
Prupe.6G341700 Prunus persica HOM05D005479 ORTHO05D007756 1.3e-07 59.3 84 42.9
TAR624G0950 Trochodendron aralioides HOM05D005479 ORTHO05D007756 1.3e-07 59.3 74 47.3
MD12G1238800 Malus domestica HOM05D005479 ORTHO05D007756 2.3e-07 58.5 79 44.3
RcHm_v2.0_Chr3g0451381 Rosa chinensis HOM05D005479 ORTHO05D007756 2.3e-07 58.5 78 48.7
FAN05G1441 Fragaria x ananassa HOM05D005479 ORTHO05D007756 3.0e-07 58.2 81 44.4
FAN05G3323 Fragaria x ananassa HOM05D005479 ORTHO05D007756 3.0e-07 58.2 81 44.4
Rhsim07G0075700 Rhododendron simsii HOM05D005479 ORTHO05D007756 3.0e-07 58.2 75 45.3
TWI74G0680 Tripterygium wilfordii HOM05D005479 ORTHO05D007756 3.0e-07 58.2 79 39.2
COL.COLO4_15310 Corchorus olitorius HOM05D005479 ORTHO05D007756 3.9e-07 57.8 80 40.0
Ah.06g192270 Amaranthus hybridus HOM05D005479 ORTHO05D007756 5.1e-07 57.4 82 40.2
CANSAT54G0735 Cannabis sativa HOM05D005479 ORTHO05D007756 6.7e-07 57.0 85 37.6
Gorai.007G283500 Gossypium raimondii HOM05D005479 ORTHO05D007756 1.1e-06 56.2 80 40.0
Sopen01g041110 Solanum pennellii HOM05D005479 ORTHO05D007756 1.1e-06 56.2 72 44.4
Thecc.05G286400 Theobroma cacao HOM05D005479 ORTHO05D007756 1.1e-06 56.2 80 38.8
Solyc01g097440.3 Solanum lycopersicum HOM05D005479 ORTHO05D007756 1.5e-06 55.8 72 44.4
Cc02_g31990 Coffea canephora HOM05D005479 ORTHO05D007756 1.9e-06 55.5 78 41.0
FvH4_6g03130 Fragaria vesca HOM05D005479 ORTHO05D007756 1.9e-06 55.5 79 44.3
FAN14G5841 Fragaria x ananassa HOM05D005479 ORTHO05D007756 1.9e-06 55.5 79 44.3
Nn7g38390 Nelumbo nucifera HOM05D005479 ORTHO05D007756 1.9e-06 55.5 76 40.8
vmacro13830 Vaccinium macrocarpon HOM05D005479 ORTHO05D007756 1.9e-06 55.5 74 44.6
GSVIVG01021825001 Vitis vinifera HOM05D005479 ORTHO05D007756 2.5e-06 55.1 75 44.0
Hund22122 Selenicereus undatus HOM05D005479 ORTHO05D007756 3.3e-06 54.7 75 41.3
AUR62001022 Chenopodium quinoa HOM05D005479 ORTHO05D007756 4.3e-06 54.3 84 41.7
Migut.N01906 Erythranthe guttata HOM05D005479 ORTHO05D007756 4.3e-06 54.3 74 47.3
Gohir.A11G253600 Gossypium hirsutum HOM05D005479 ORTHO05D007756 4.3e-06 54.3 80 38.8
Atru.chr2.800 Acer truncatum HOM05D005479 ORTHO05D007756 5.6e-06 53.9 77 42.9
Sc09g0003880 Simmondsia chinensis HOM05D005479 ORTHO05D007756 5.6e-06 53.9 75 40.0
Aa31LG11G8350 Aethionema arabicum HOM05D005479 ORTHO05D007756 7.4e-06 53.5 77 39.0
Potri.013G039600 Populus trichocarpa HOM05D005479 ORTHO05D007756 7.4e-06 53.5 75 41.3
SalBow4G0205 Salvia bowleyana HOM05D005479 ORTHO05D007756 9.6e-06 53.1 85 44.7


User provided reference genes

Program Settings