Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.1QT3IR Arachis hypogaea HOM05D006841 ORTHO05D008607 1.9e-295 1018.5 515 100.0
arahy.Tifrunner.gnm1.ann1.UR06JS Arachis hypogaea HOM05D006841 ORTHO05D008607 3.9e-293 1010.7 515 99.0
Phvul.006G071400 Phaseolus vulgaris HOM05D006841 ORTHO05D008607 3.0e-245 851.7 508 85.4
Glyma.11G167300 Glycine max HOM05D006841 ORTHO05D008607 1.1e-242 843.2 512 85.4
Glyma.18G059800 Glycine max HOM05D006841 ORTHO05D008607 9.0e-242 840.1 508 84.1
Lalb_Chr18g0051231 Lupinus albus HOM05D006841 ORTHO05D008607 1.8e-237 825.9 512 82.4
Lj6g0024894 Lotus japonicus HOM05D006841 ORTHO05D008607 9.4e-231 803.5 512 80.7
VMungo0540G0160 Vigna mungo HOM05D006841 ORTHO05D008607 8.2e-227 790.4 484 83.7
Psat5g157440 Pisum sativum HOM05D006841 ORTHO05D008607 2.0e-225 785.8 511 79.8
TPR.G32925 Trifolium pratense HOM05D006841 ORTHO05D008607 4.5e-225 784.6 510 80.8
Medtr3g465390 Medicago truncatula HOM05D006841 ORTHO05D008607 3.8e-224 781.6 511 79.5
Prupe.6G052600 Prunus persica HOM05D006841 ORTHO05D008607 2.0e-212 742.7 494 76.1
Potri.009G075200 Populus trichocarpa HOM05D006841 ORTHO05D008607 5.9e-209 731.1 507 73.4
Atru.chr3.4145 Acer truncatum HOM05D006841 ORTHO05D008607 4.2e-207 724.9 509 72.5
Ciclev10028251m.g Citrus clementina HOM05D006841 ORTHO05D008607 1.2e-206 723.4 509 73.7
MD03G1062600 Malus domestica HOM05D006841 ORTHO05D008607 8.0e-206 720.7 455 78.7
RcHm_v2.0_Chr5g0070721 Rosa chinensis HOM05D006841 ORTHO05D008607 8.0e-206 720.7 460 77.8
Haze_24381 Corylus avellana HOM05D006841 ORTHO05D008607 3.0e-205 718.8 537 70.8
FAN11G0941 Fragaria x ananassa HOM05D006841 ORTHO05D008607 1.2e-204 716.8 456 77.2
CiPaw.14G056400 Carya illinoinensis HOM05D006841 ORTHO05D008607 1.5e-204 716.5 459 78.4
FvH4_3g39290 Fragaria vesca HOM05D006841 ORTHO05D008607 2.0e-204 716.1 456 77.2
MD11G1066200 Malus domestica HOM05D006841 ORTHO05D008607 2.6e-204 715.7 455 77.6
Thecc.09G353800 Theobroma cacao HOM05D006841 ORTHO05D008607 3.4e-204 715.3 506 72.1
Sabra09G0057100 Salix brachista HOM05D006841 ORTHO05D008607 4.4e-204 714.9 454 78.2
Duzib170G1072 Durio zibethinus HOM05D006841 ORTHO05D008607 5.7e-204 714.5 506 72.1
FAN25G3694 Fragaria x ananassa HOM05D006841 ORTHO05D008607 9.8e-204 713.8 456 77.0
Gorai.009G112400 Gossypium raimondii HOM05D006841 ORTHO05D008607 9.8e-204 713.8 500 72.8
COL.COLO4_11072 Corchorus olitorius HOM05D006841 ORTHO05D008607 1.3e-203 713.4 506 72.9
Dinv28672 Davidia involucrata HOM05D006841 ORTHO05D008607 3.7e-203 711.8 440 80.9
FAN21G2904 Fragaria x ananassa HOM05D006841 ORTHO05D008607 1.1e-202 710.3 456 76.8
Manes.02G217600 Manihot esculenta HOM05D006841 ORTHO05D008607 3.1e-202 708.8 495 72.7
Gohir.A05G108000 Gossypium hirsutum HOM05D006841 ORTHO05D008607 4.1e-202 708.4 444 78.2
PGR102G0989 Punica granatum HOM05D006841 ORTHO05D008607 7.0e-202 707.6 493 72.0
Gohir.D05G108200 Gossypium hirsutum HOM05D006841 ORTHO05D008607 1.2e-201 706.8 500 72.0
QL01p039597 Quercus lobata HOM05D006841 ORTHO05D008607 1.2e-201 706.8 515 70.5
Ca_14982_v3 Cicer arietinum L. HOM05D006841 ORTHO05D008607 2.7e-201 705.7 485 76.9
Duzib168G0722 Durio zibethinus HOM05D006841 ORTHO05D008607 7.7e-201 704.1 513 70.6
CSS0042618 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 2.3e-200 702.6 506 70.0
TAR369G0096 Trochodendron aralioides HOM05D006841 ORTHO05D008607 3.8e-200 701.8 456 76.1
ClCG02G019390 Citrullus lanatus HOM05D006841 ORTHO05D008607 1.9e-199 699.5 457 74.4
TAR636G1839 Trochodendron aralioides HOM05D006841 ORTHO05D008607 2.5e-199 699.1 514 69.5
CANSAT54G0320 Cannabis sativa HOM05D006841 ORTHO05D008607 4.2e-199 698.4 450 77.3
CsaV3_6G016010 Cucumis sativus L. HOM05D006841 ORTHO05D008607 5.5e-199 698.0 513 70.2
Actinidia34467 Actinidia chinensis HOM05D006841 ORTHO05D008607 7.2e-199 697.6 506 69.8
CiPaw.13G073200 Carya illinoinensis HOM05D006841 ORTHO05D008607 1.6e-198 696.4 511 70.3
TWI79G1747 Tripterygium wilfordii HOM05D006841 ORTHO05D008607 2.8e-198 695.7 495 71.9
MELO3C026835.2 Cucumis melo HOM05D006841 ORTHO05D008607 3.6e-198 695.3 513 70.2
Eucgr.B02230 Eucalyptus grandis HOM05D006841 ORTHO05D008607 4.7e-198 694.9 508 70.1
Sed0019546 Sechium edule HOM05D006841 ORTHO05D008607 8.3e-195 684.1 457 73.5
MSTRG.12683 Avicennia marina HOM05D006841 ORTHO05D008607 2.4e-194 682.6 454 74.0
SalBow2G2391 Salvia bowleyana HOM05D006841 ORTHO05D008607 1.9e-191 672.9 440 75.7
Solyc05g012140.3 Solanum lycopersicum HOM05D006841 ORTHO05D008607 9.5e-191 670.6 446 74.2
Sopen05g006930 Solanum pennellii HOM05D006841 ORTHO05D008607 9.5e-191 670.6 446 74.2
CSS0014141 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 4.7e-190 668.3 506 67.2
PGSC0003DMG401028313 Solanum tuberosum HOM05D006841 ORTHO05D008607 1.8e-189 666.4 446 74.0
Oeu018490.1 Olea europaea HOM05D006841 ORTHO05D008607 2.3e-189 666.0 515 67.6
Peaxi162Scf01324g00238 Petunia axillaris HOM05D006841 ORTHO05D008607 1.5e-188 663.3 451 74.5
vmacro14612 Vaccinium macrocarpon HOM05D006841 ORTHO05D008607 1.7e-187 659.8 513 65.5
Rhsim01G0239400 Rhododendron simsii HOM05D006841 ORTHO05D008607 3.7e-187 658.7 508 66.5
HanXRQChr01g0011601 Helianthus annuus HOM05D006841 ORTHO05D008607 6.4e-187 657.9 444 72.7
CAN.G707.10 Capsicum annuum HOM05D006841 ORTHO05D008607 9.2e-186 654.1 453 71.7
Sc06g0008150 Simmondsia chinensis HOM05D006841 ORTHO05D008607 2.7e-185 652.5 455 70.3
EL10Ac7g15887 Beta vulgaris HOM05D006841 ORTHO05D008607 1.5e-180 636.7 449 69.3
PSO017G2874 Papaver somniferum HOM05D006841 ORTHO05D008607 2.6e-180 636.0 522 64.0
Aqoxy1G01268 Aquilegia oxysepala HOM05D006841 ORTHO05D008607 3.4e-180 635.6 443 70.9
Lj2A1088G41 Lonicera japonica HOM05D006841 ORTHO05D008607 5.8e-180 634.8 405 78.0
Migut.N00773 Erythranthe guttata HOM05D006841 ORTHO05D008607 9.8e-180 634.0 454 68.9
PSO349G0316 Papaver somniferum HOM05D006841 ORTHO05D008607 5.4e-178 628.2 527 63.6
Lsat_1_v5_gn_5_173260 Lactuca sativa HOM05D006841 ORTHO05D008607 1.2e-177 627.1 416 74.0
Hund05042 Selenicereus undatus HOM05D006841 ORTHO05D008607 2.7e-177 625.9 449 67.7
AUR62036246 Chenopodium quinoa HOM05D006841 ORTHO05D008607 4.6e-177 625.2 449 68.8
AUR62009700 Chenopodium quinoa HOM05D006841 ORTHO05D008607 7.8e-177 624.4 511 62.2
Ah.15g096690 Amaranthus hybridus HOM05D006841 ORTHO05D008607 5.1e-176 621.7 449 67.5
MBI15_g21765_MAGBIO Magnolia biondii HOM05D006841 ORTHO05D008607 5.6e-175 618.2 499 64.3
unitig_94.g28363 Utricularia gibba HOM05D006841 ORTHO05D008607 1.2e-174 617.1 441 68.7
THA.LOC104800754 Tarenaya hassleriana HOM05D006841 ORTHO05D008607 1.6e-174 616.7 457 67.2
ECA248G2088 Erigeron canadensis HOM05D006841 ORTHO05D008607 4.7e-174 615.1 419 71.4
Ah.08g215320 Amaranthus hybridus HOM05D006841 ORTHO05D008607 1.7e-171 606.7 440 66.8
Carub.0004s1120 Capsella rubella HOM05D006841 ORTHO05D008607 6.4e-171 604.7 515 59.2
AL4G24870 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 1.4e-170 603.6 495 62.0
Aa31LG5G6580 Aethionema arabicum HOM05D006841 ORTHO05D008607 2.7e-169 599.4 510 60.8
Thhalv10016546m.g Eutrema salsugineum HOM05D006841 ORTHO05D008607 2.7e-169 599.4 445 66.1
AT2G30100 Arabidopsis thaliana HOM05D006841 ORTHO05D008607 3.5e-169 599.0 499 60.7
Sp4g12660 Schrenkiella parvula HOM05D006841 ORTHO05D008607 4.6e-169 598.6 482 62.9
CARHR123400 Cardamine hirsuta HOM05D006841 ORTHO05D008607 2.3e-168 596.3 456 63.6
BraA04t17817Z Brassica rapa HOM05D006841 ORTHO05D008607 1.1e-167 594.0 457 63.7
C04p58980 Brassica napus HOM05D006841 ORTHO05D008607 1.5e-167 593.6 453 64.2
A04p22780 Brassica napus HOM05D006841 ORTHO05D008607 2.5e-167 592.8 455 63.7
BolC4t27410H Brassica oleracea HOM05D006841 ORTHO05D008607 3.3e-167 592.4 476 62.4
SGA_v2.0_scaffold104G30129 Striga asiatica HOM05D006841 ORTHO05D008607 2.4e-165 586.3 458 65.3
CDE06G2104 Ceratophyllum demersum HOM05D006841 ORTHO05D008607 5.8e-164 581.6 446 64.3
BcaC02g08056 Brassica carinata HOM05D006841 ORTHO05D008607 4.2e-162 575.5 445 63.6
GSVIVG01024686001 Vitis vinifera HOM05D006841 ORTHO05D008607 2.0e-156 556.6 381 74.0
Cc01_g14600 Coffea canephora HOM05D006841 ORTHO05D008607 4.6e-153 545.4 398 69.1
DCAR_007349 Daucus carota HOM05D006841 ORTHO05D008607 1.4e-149 533.9 354 72.6
Zm00001eb286480 Zea mays HOM05D006841 ORTHO05D008607 6.2e-142 508.4 468 55.3
Os05g0353300 Oryza sativa ssp. japonica HOM05D006841 ORTHO05D008607 1.8e-141 506.9 491 53.8
ATR0174G035 Amborella trichopoda HOM05D006841 ORTHO05D008607 1.2e-140 504.2 458 57.4
AL59U10050 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 1.5e-127 460.7 434 57.4
Actinidia23875 Actinidia chinensis HOM05D006841 ORTHO05D008607 4.2e-122 442.6 286 77.3
SEGI_38470 Sequoiadendron giganteum HOM05D006841 ORTHO05D008607 3.0e-112 409.8 424 47.4
HPP92_025104 Vanilla planifolia HOM05D006841 ORTHO05D008607 4.8e-110 402.5 343 58.0
Hma1.2p1_0146F.1_g065520 Hydrangea macrophylla HOM05D006841 ORTHO05D008607 4.1e-109 399.4 257 74.7
CSS0012316 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 1.2e-95 354.8 423 49.4
Mapoly0068s0098 Marchantia polymorpha HOM05D006841 ORTHO05D008607 5.7e-87 325.9 438 40.2
Nn2g10947 Nelumbo nucifera HOM05D006841 ORTHO05D008607 4.2e-82 309.7 233 69.1
Nn2g13216 Nelumbo nucifera HOM05D006841 ORTHO05D008607 1.7e-75 287.7 202 74.3
Pp3c12_8330 Physcomitrium patens HOM05D006841 ORTHO05D008607 2.7e-68 263.8 429 36.6
Cpa.g.sc2.394 Carica papaya HOM05D006841 ORTHO05D008607 9.5e-66 255.4 151 80.1
SMO304G0125 Selaginella moellendorffii HOM05D006841 ORTHO05D008607 1.2e-63 248.4 433 34.2
MD11G1194000 Malus domestica HOM05D006841 ORTHO05D008607 1.7e-59 234.6 134 84.3
Oeu034210.1 Olea europaea HOM05D009051 ORTHO05D000140 4.0e-48 196.8 171 57.9
Oeu034517.1 Olea europaea HOM05D006841 ORTHO05D008607 3.5e-36 157.1 228 42.5
Oeu034513.1 Olea europaea HOM05D006841 ORTHO05D008607 1.3e-35 155.2 228 42.1
VMungo0331G0799 Vigna mungo HOM05D000172 ORTHO05D004529 1.1e-34 152.1 112 68.8
AagrBONN_evm.TU.Sc2ySwM_117.787 Anthoceros agrestis HOM05D006841 ORTHO05D008607 1.6e-33 148.3 200 40.5
Oeu034514.1 Olea europaea HOM05D006841 ORTHO05D008607 2.1e-33 147.9 127 58.3
Oeu034518.1 Olea europaea HOM05D006841 ORTHO05D008607 6.9e-32 142.9 126 57.9
Oeu019495.1 Olea europaea HOM05D006841 ORTHO05D008607 2.2e-14 84.7 143 36.4


User provided reference genes

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