Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 1.2e-161 573.2 298 100.0
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 4.1e-154 548.1 300 96.3
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 9.6e-111 404.1 299 76.6
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 8.1e-110 401.0 301 75.4
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 1.5e-108 396.7 309 72.5
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 1.7e-107 393.3 300 75.3
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 3.0e-104 382.5 305 71.5
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 1.4e-101 373.6 300 71.0
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 3.1e-101 372.5 305 70.8
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 8.7e-96 354.4 307 65.5
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 5.6e-95 351.7 306 66.7
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 7.4e-95 351.3 302 65.2
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 3.1e-93 345.9 280 68.6
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 7.6e-92 341.3 308 64.0
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 1.9e-90 336.7 308 61.7
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 7.1e-90 334.7 303 63.7
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 6.0e-89 331.6 253 70.8
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 1.3e-88 330.5 237 79.3
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 6.7e-88 328.2 252 69.4
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 1.9e-87 326.6 306 61.4
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 2.5e-87 326.2 305 62.0
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 3.3e-87 325.9 299 61.5
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 8.2e-86 321.2 303 61.1
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 5.3e-85 318.5 256 66.8
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 6.9e-85 318.2 271 63.8
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 9.0e-85 317.8 291 59.8
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 2.6e-84 316.2 283 61.1
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 1.0e-83 314.3 298 60.1
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 4.2e-82 308.9 221 71.0
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 4.2e-82 308.9 214 72.4
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 6.1e-81 305.1 251 66.1
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 3.9e-80 302.4 231 68.4
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 2.5e-79 299.7 238 66.4
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 4.3e-79 298.9 251 62.9
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 7.4e-79 298.1 283 58.3
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 7.4e-79 298.1 300 55.0
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.3e-78 297.4 308 58.1
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 1.6e-78 297.0 205 73.7
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 4.8e-78 295.4 225 68.4
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 4.8e-78 295.4 218 67.4
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 6.3e-78 295.0 216 71.8
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 6.3e-78 295.0 216 71.8
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 1.4e-77 293.9 282 58.5
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 1.8e-77 293.5 239 64.4
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 4.1e-77 292.4 271 59.0
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 4.1e-77 292.4 301 54.8
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 5.3e-77 292.0 254 61.4
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 5.3e-77 292.0 205 71.2
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 5.9e-76 288.5 270 56.7
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 5.9e-76 288.5 205 70.2
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 5.9e-76 288.5 294 55.1
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 5.9e-76 288.5 259 61.8
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 1.3e-75 287.3 302 55.0
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 1.7e-75 287.0 285 56.1
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 2.9e-75 286.2 288 55.9
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 2.9e-75 286.2 215 70.7
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 5.0e-75 285.4 254 59.8
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 4.2e-74 282.3 193 73.6
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 5.5e-74 282.0 211 69.7
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 2.1e-73 280.0 271 57.6
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 2.1e-73 280.0 271 59.0
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 2.7e-73 279.6 269 59.5
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.4e-72 277.3 348 51.4
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 3.0e-72 276.2 211 68.7
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 8.8e-72 274.6 229 62.9
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 1.1e-71 274.2 212 67.0
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 1.1e-71 274.2 227 62.6
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 2.0e-71 273.5 204 68.6
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 3.3e-71 272.7 269 59.1
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 9.7e-71 271.2 263 60.1
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 2.2e-70 270.0 282 55.7
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 1.2e-68 264.2 261 57.1
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 1.5e-68 263.8 261 56.7
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 1.3e-67 260.8 279 53.8
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 1.1e-66 257.7 274 51.8
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 3.6e-65 252.7 175 72.0
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 1.4e-64 250.8 313 50.2
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 2.0e-63 246.9 197 63.5
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 2.0e-63 246.9 269 54.3
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 3.3e-63 246.1 290 51.7
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 3.3e-63 246.1 229 62.4
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 7.4e-63 245.0 290 51.4
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 2.2e-62 243.4 374 46.0
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 4.8e-62 242.3 211 56.9
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 1.8e-61 240.4 189 65.1
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 2.4e-61 240.0 208 57.7
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 4.1e-61 239.2 272 52.9
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 7.0e-61 238.4 324 46.3
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 2.6e-60 236.5 242 57.0
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 1.7e-59 233.8 297 46.8
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 1.5e-58 230.7 175 69.1
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 2.5e-58 229.9 220 55.5
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 3.2e-58 229.6 294 49.3
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 7.2e-58 228.4 278 50.0
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 1.4e-56 224.2 202 55.0
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 2.6e-55 219.9 223 56.1
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 4.1e-53 212.6 175 61.7
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 2.3e-48 196.8 142 70.4
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 3.0e-48 196.4 134 72.4
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 4.0e-48 196.1 228 52.2
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 6.8e-48 195.3 214 53.7
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 2.2e-46 190.3 193 59.6
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 4.1e-45 186.0 236 48.3
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 5.0e-43 179.1 226 49.6
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 6.5e-43 178.7 131 71.0
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 6.5e-43 178.7 214 45.3
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 4.1e-37 159.5 143 54.5
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 4.5e-36 156.0 264 42.8
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 1.7e-35 154.1 193 49.2
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 2.9e-35 153.3 190 44.2
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 6.6e-35 152.1 119 68.9
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 6.1e-33 145.6 238 41.2
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 6.8e-32 142.1 115 62.6
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 7.3e-26 122.1 139 51.8
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 7.5e-23 112.1 187 37.4
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 7.5e-23 112.1 178 35.4
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 6.0e-20 102.4 192 35.9
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 4.0e-16 89.7 113 46.9
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 1.6e-12 77.8 69 62.3
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 2.7e-12 77.0 91 48.4
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 7.3e-10 68.9 53 64.2
Eucgr.G02394 Eucalyptus grandis HOM05D006650 ORTHO05D008401 2.0e-07 60.8 38 78.9


User provided reference genes

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