Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.1M3GV3 Arachis hypogaea HOM05D004194 ORTHO05D005641 5.4e-150 534.3 262 100.0
arahy.Tifrunner.gnm1.ann1.N12FQY Arachis hypogaea HOM05D004194 ORTHO05D005641 1.2e-67 260.8 135 94.1
arahy.Tifrunner.gnm1.ann1.S0XZCZ Arachis hypogaea HOM05D004194 ORTHO05D005641 3.4e-67 259.2 135 93.3
Phvul.009G036600 Phaseolus vulgaris HOM05D004194 ORTHO05D005641 3.4e-67 259.2 135 93.3
VMungo1309G1669 Vigna mungo HOM05D004194 ORTHO05D005641 4.4e-67 258.8 135 93.3
Glyma.04G094600 Glycine max HOM05D004194 ORTHO05D005641 1.7e-66 256.9 135 92.6
Phvul.002G296600 Phaseolus vulgaris HOM05D004194 ORTHO05D005641 2.2e-66 256.5 135 92.6
Lalb_Chr11g0064971 Lupinus albus HOM05D004194 ORTHO05D005641 3.7e-66 255.8 135 91.9
Glyma.06G096700 Glycine max HOM05D004194 ORTHO05D005641 1.4e-65 253.8 135 91.9
Lalb_Chr08g0242531 Lupinus albus HOM05D004194 ORTHO05D005641 9.1e-65 251.1 135 89.6
Lj1g0000709 Lotus japonicus HOM05D004194 ORTHO05D005641 1.6e-64 250.4 135 91.1
Nitab4.5_0000131g0240 Nicotiana tabacum HOM05D004194 ORTHO05D005641 2.7e-64 249.6 131 90.8
Nitab4.5_0010888g0020 Nicotiana tabacum HOM05D004194 ORTHO05D005641 2.7e-64 249.6 138 87.0
Medtr3g100220 Medicago truncatula HOM05D004194 ORTHO05D005641 4.5e-64 248.8 135 88.9
SalBow8G0776 Salvia bowleyana HOM05D004194 ORTHO05D005641 1.0e-63 247.7 133 88.7
Cpa.g.sc21.21 Carica papaya HOM05D004194 ORTHO05D005641 1.3e-63 247.3 131 91.6
FAN08G1093 Fragaria x ananassa HOM05D004194 ORTHO05D005641 1.3e-63 247.3 134 88.1
MD14G1006400 Malus domestica HOM05D004194 ORTHO05D005641 1.3e-63 247.3 138 85.5
SGA_v2.0_scaffold24G10675 Striga asiatica HOM05D004194 ORTHO05D005641 1.3e-63 247.3 131 90.1
Haze_22460 Corylus avellana HOM05D004194 ORTHO05D005641 1.7e-63 246.9 135 88.9
DCAR_012855 Daucus carota HOM05D004194 ORTHO05D005641 1.7e-63 246.9 131 89.3
MD12G1008900 Malus domestica HOM05D004194 ORTHO05D005641 1.7e-63 246.9 135 88.1
Sabra02G0083500 Salix brachista HOM05D004194 ORTHO05D005641 1.7e-63 246.9 136 86.8
TPR.G6303 Trifolium pratense HOM05D004194 ORTHO05D005641 1.7e-63 246.9 135 87.4
CiPaw.07G165400 Carya illinoinensis HOM05D004194 ORTHO05D005641 2.2e-63 246.5 131 90.8
RcHm_v2.0_Chr7g0216141 Rosa chinensis HOM05D004194 ORTHO05D005641 2.2e-63 246.5 131 90.1
Cfa013797 Carpinus fangiana HOM05D004194 ORTHO05D005641 3.8e-63 245.7 135 88.1
Potri.002G106200 Populus trichocarpa HOM05D004194 ORTHO05D005641 3.8e-63 245.7 131 88.5
SalBow6G2182 Salvia bowleyana HOM05D004194 ORTHO05D005641 3.8e-63 245.7 131 90.1
Atru.chr13.1009 Acer truncatum HOM05D004194 ORTHO05D005641 5.0e-63 245.4 131 90.8
Ca_23440_v3 Cicer arietinum L. HOM05D004194 ORTHO05D005641 5.0e-63 245.4 135 88.1
ClCG08G011660 Citrullus lanatus HOM05D004194 ORTHO05D005641 5.0e-63 245.4 131 89.3
Dinv42612 Davidia involucrata HOM05D004194 ORTHO05D005641 5.0e-63 245.4 132 88.6
Prupe.1G532200 Prunus persica HOM05D004194 ORTHO05D005641 5.0e-63 245.4 135 86.7
Peaxi162Scf00454g00416 Petunia axillaris HOM05D004194 ORTHO05D005641 6.5e-63 245.0 138 84.8
QL09p017817 Quercus lobata HOM05D004194 ORTHO05D005641 6.5e-63 245.0 131 90.8
TAR625G0434 Trochodendron aralioides HOM05D004194 ORTHO05D005641 6.5e-63 245.0 131 88.5
Actinidia10274 Actinidia chinensis HOM05D004194 ORTHO05D005641 8.5e-63 244.6 131 87.0
Sed0011017 Sechium edule HOM05D004194 ORTHO05D005641 8.5e-63 244.6 131 89.3
Hund09317 Selenicereus undatus HOM05D004194 ORTHO05D005641 8.5e-63 244.6 131 87.0
CsaV3_2G030250 Cucumis sativus L. HOM05D004194 ORTHO05D005641 1.1e-62 244.2 131 88.5
FvH4_5g34710 Fragaria vesca HOM05D004194 ORTHO05D005641 1.1e-62 244.2 131 89.3
Solyc04g076320.4 Solanum lycopersicum HOM05D004194 ORTHO05D005641 1.1e-62 244.2 131 88.5
PGSC0003DMG400009343 Solanum tuberosum HOM05D004194 ORTHO05D005641 1.1e-62 244.2 131 88.5
AUR62004928 Chenopodium quinoa HOM05D004194 ORTHO05D005641 1.5e-62 243.8 131 86.3
ECA232G1743 Erigeron canadensis HOM05D004194 ORTHO05D005641 1.5e-62 243.8 131 89.3
FAN04G1572 Fragaria x ananassa HOM05D004194 ORTHO05D005641 1.5e-62 243.8 134 87.3
Rhsim06G0071600 Rhododendron simsii HOM05D004194 ORTHO05D005641 1.5e-62 243.8 144 81.2
SGA_v2.0_scaffold5G02969 Striga asiatica HOM05D004194 ORTHO05D005641 1.5e-62 243.8 131 89.3
Hma1.2p1_0010F.1_g006650 Hydrangea macrophylla HOM05D004194 ORTHO05D005641 1.9e-62 243.4 131 88.5
Lj4A737T61 Lonicera japonica HOM05D004194 ORTHO05D005641 1.9e-62 243.4 131 88.5
ClCG11G014580 Citrullus lanatus HOM05D004194 ORTHO05D005641 2.5e-62 243.0 135 87.4
MELO3C003523.2 Cucumis melo HOM05D004194 ORTHO05D005641 2.5e-62 243.0 135 87.4
Sopen04g030120 Solanum pennellii HOM05D004194 ORTHO05D005641 2.5e-62 243.0 131 87.8
Thecc.08G071000 Theobroma cacao HOM05D004194 ORTHO05D005641 2.5e-62 243.0 131 89.3
TWI12G1457 Tripterygium wilfordii HOM05D004194 ORTHO05D005641 2.5e-62 243.0 131 89.3
TAR381G0874 Trochodendron aralioides HOM05D004194 ORTHO05D005641 2.5e-62 243.0 131 87.0
MSTRG.28070 Avicennia marina HOM05D004194 ORTHO05D005641 3.2e-62 242.7 131 87.8
Eucgr.F02151 Eucalyptus grandis HOM05D004194 ORTHO05D005641 3.2e-62 242.7 131 89.3
FAN18G1922 Fragaria x ananassa HOM05D004194 ORTHO05D005641 4.2e-62 242.3 166 74.1
Nn5g29879 Nelumbo nucifera HOM05D004194 ORTHO05D005641 4.2e-62 242.3 131 84.7
Hund21605 Selenicereus undatus HOM05D004194 ORTHO05D005641 4.2e-62 242.3 131 86.3
CANSAT21G1481 Cannabis sativa HOM05D004194 ORTHO05D005641 5.5e-62 241.9 131 88.5
Ciclev10000871m.g Citrus clementina HOM05D004194 ORTHO05D005641 5.5e-62 241.9 131 89.3
MELO3C011085.2 Cucumis melo HOM05D004194 ORTHO05D005641 5.5e-62 241.9 131 87.8
PSO170G4697 Papaver somniferum HOM05D004194 ORTHO05D005641 5.5e-62 241.9 131 86.3
PSO210G0577 Papaver somniferum HOM05D004194 ORTHO05D005641 5.5e-62 241.9 131 86.3
Psat5g048920 Pisum sativum HOM05D004194 ORTHO05D005641 5.5e-62 241.9 135 85.9
Sed0019515 Sechium edule HOM05D004194 ORTHO05D005641 5.5e-62 241.9 135 86.7
THA.LOC104799791 Tarenaya hassleriana HOM05D004194 ORTHO05D005641 5.5e-62 241.9 135 85.9
vmacro17477 Vaccinium macrocarpon HOM05D004194 ORTHO05D005641 5.5e-62 241.9 131 86.3
GSVIVG01009181001 Vitis vinifera HOM05D004194 ORTHO05D005641 5.5e-62 241.9 131 86.3
Duzib093G0846 Durio zibethinus HOM05D004194 ORTHO05D005641 7.2e-62 241.5 131 89.3
CsaV3_3G047990 Cucumis sativus L. HOM05D004194 ORTHO05D005641 9.4e-62 241.1 135 86.7
FAN13G1619 Fragaria x ananassa HOM05D004194 ORTHO05D005641 9.4e-62 241.1 138 84.1
ATR0767G266 Amborella trichopoda HOM05D004194 ORTHO05D005641 1.2e-61 240.7 131 86.3
Manes.18G058500 Manihot esculenta HOM05D004194 ORTHO05D005641 1.2e-61 240.7 131 87.8
CANSAT21G2248 Cannabis sativa HOM05D004194 ORTHO05D005641 1.6e-61 240.4 139 84.2
AUR62001023 Chenopodium quinoa HOM05D004194 ORTHO05D005641 1.6e-61 240.4 131 84.0
Cc10_g15890 Coffea canephora HOM05D004194 ORTHO05D005641 2.1e-61 240.0 130 87.7
Oeu049772.1 Olea europaea HOM05D004194 ORTHO05D005641 2.1e-61 240.0 131 87.0
vmacro21340 Vaccinium macrocarpon HOM05D004194 ORTHO05D005641 2.7e-61 239.6 131 84.7
Gorai.002G139300 Gossypium raimondii HOM05D004194 ORTHO05D005641 3.6e-61 239.2 131 89.3
CSS0028335 Camellia sinensis var. sinensis HOM05D004194 ORTHO05D005641 4.7e-61 238.8 131 85.5
Migut.N01596 Erythranthe guttata HOM05D004194 ORTHO05D005641 4.7e-61 238.8 131 85.5
CAN.G475.29 Capsicum annuum HOM05D004194 ORTHO05D005641 6.1e-61 238.4 138 81.9
AL6G21480 Arabidopsis lyrata HOM05D004194 ORTHO05D005641 8.0e-61 238.0 135 82.2
PGR042G2811 Punica granatum HOM05D004194 ORTHO05D005641 8.0e-61 238.0 131 85.5
Ah.06g192260 Amaranthus hybridus HOM05D004194 ORTHO05D005641 1.0e-60 237.7 131 84.0
EL10Ac4g09117 Beta vulgaris HOM05D004194 ORTHO05D005641 1.0e-60 237.7 131 82.4
CARHR202370 Cardamine hirsuta HOM05D004194 ORTHO05D005641 1.0e-60 237.7 131 84.0
COL.COLO4_35249 Corchorus olitorius HOM05D004194 ORTHO05D005641 1.0e-60 237.7 138 83.3
Gohir.A01G126900 Gossypium hirsutum HOM05D004194 ORTHO05D005641 1.0e-60 237.7 131 88.5
Gohir.D01G114300 Gossypium hirsutum HOM05D004194 ORTHO05D005641 1.0e-60 237.7 131 88.5
Sp6g32570 Schrenkiella parvula HOM05D004194 ORTHO05D005641 1.4e-60 237.3 131 84.0
BcaNung01903 Brassica carinata HOM05D004194 ORTHO05D005641 1.8e-60 236.9 131 84.0
AT5G10920 Arabidopsis thaliana HOM05D004194 ORTHO05D005641 2.3e-60 236.5 131 84.0
C09p65910 Brassica napus HOM05D004194 ORTHO05D005641 2.3e-60 236.5 131 84.0
BolC9t59414H Brassica oleracea HOM05D004194 ORTHO05D005641 2.3e-60 236.5 131 84.0
Aa31LG3G16210 Aethionema arabicum HOM05D004194 ORTHO05D005641 4.0e-60 235.7 131 84.0
unitig_578.g16695 Utricularia gibba HOM05D004194 ORTHO05D005641 4.0e-60 235.7 130 86.2
Lsat_1_v5_gn_6_104960 Lactuca sativa HOM05D004194 ORTHO05D005641 5.2e-60 235.3 138 81.9
HPP92_001058 Vanilla planifolia HOM05D004194 ORTHO05D005641 5.2e-60 235.3 131 86.3
A10p26770 Brassica napus HOM05D004194 ORTHO05D005641 6.8e-60 235.0 131 83.2
BraA10t44732Z Brassica rapa HOM05D004194 ORTHO05D005641 6.8e-60 235.0 131 83.2
Thhalv10013269m.g Eutrema salsugineum HOM05D004194 ORTHO05D005641 6.8e-60 235.0 131 83.2
THA.LOC104806871 Tarenaya hassleriana HOM05D004194 ORTHO05D005641 6.8e-60 235.0 135 83.0
Aqoxy6G00868 Aquilegia oxysepala HOM05D004194 ORTHO05D005641 1.2e-59 234.2 131 84.7
CDE01G0047 Ceratophyllum demersum HOM05D004194 ORTHO05D005641 2.0e-59 233.4 131 85.5
Carub.0006s0941 Capsella rubella HOM05D004194 ORTHO05D005641 2.6e-59 233.0 131 82.4
CDE02G0818 Ceratophyllum demersum HOM05D004194 ORTHO05D005641 4.4e-59 232.3 131 84.7
Lsat_1_v5_gn_9_75040 Lactuca sativa HOM05D004194 ORTHO05D005641 7.5e-59 231.5 138 80.4
Os03g0305500 Oryza sativa ssp. japonica HOM05D004194 ORTHO05D005641 7.5e-59 231.5 131 83.2
MBI16_g12466_MAGBIO Magnolia biondii HOM05D004194 ORTHO05D005641 3.7e-58 229.2 138 79.0
Zm00001eb396370 Zea mays HOM05D004194 ORTHO05D005641 4.8e-58 228.8 131 81.7
CBR_g48741 Chara braunii HOM05D004194 ORTHO05D005641 2.4e-57 226.5 131 81.7
Pp3c18_13220 Physcomitrium patens HOM05D004194 ORTHO05D005641 3.1e-57 226.1 131 80.2
AagrBONN_evm.TU.Sc2ySwM_362.1891 Anthoceros agrestis HOM05D004194 ORTHO05D005641 4.5e-56 222.2 131 79.4
SMO143G0205 Selaginella moellendorffii HOM05D004194 ORTHO05D005641 1.7e-55 220.3 131 78.6
Mapoly0005s0193 Marchantia polymorpha HOM05D004194 ORTHO05D005641 8.6e-55 218.0 131 76.3
arahy.Tifrunner.gnm1.ann1.1Z2J14 Arachis hypogaea HOM05D000177 ORTHO05D003047 8.9e-52 208.0 104 94.2
HanXRQChr15g0484861 Helianthus annuus HOM05D004194 ORTHO05D005641 1.5e-51 207.2 131 77.1
PRCOL_00005568 Prasinoderma coloniale HOM05D004194 ORTHO05D005641 1.5e-51 207.2 131 73.3
Sed0012940 Sechium edule HOM05D004194 ORTHO05D005641 7.5e-51 204.9 121 81.8
arahy.Tifrunner.gnm1.ann1.PKW3MB Arachis hypogaea HOM05D000177 ORTHO05D003047 1.3e-50 204.1 104 93.3
BcaC01g05557 Brassica carinata HOM05D004194 ORTHO05D005641 8.3e-50 201.4 114 81.6
BcaC03g13340 Brassica carinata HOM05D004194 ORTHO05D005641 1.6e-48 197.2 131 75.6
BolC2t06434H Brassica oleracea HOM05D004194 ORTHO05D005641 1.6e-48 197.2 131 75.6
BcaC04g19277 Brassica carinata HOM05D004194 ORTHO05D005641 6.6e-47 191.8 121 76.9
SHI09678 Sapria himalayana HOM05D004194 ORTHO05D005641 2.5e-46 189.9 135 70.4
MD14G1006200 Malus domestica HOM05D004194 ORTHO05D005641 3.3e-46 189.5 112 84.8
C03p24950 Brassica napus HOM05D004194 ORTHO05D005641 7.3e-46 188.3 102 85.3
Actinidia33569 Actinidia chinensis HOM05D004194 ORTHO05D005641 2.4e-41 173.3 131 67.2
A02p00760 Brassica napus HOM05D004194 ORTHO05D005641 1.9e-38 163.7 93 81.7
Sc11g0003910 Simmondsia chinensis HOM05D004194 ORTHO05D005641 3.4e-35 152.9 76 90.8
SEGI_11237 Sequoiadendron giganteum HOM05D004194 ORTHO05D005641 5.4e-33 145.6 76 88.2
PSO349G0016 Papaver somniferum HOM05D004194 ORTHO05D005641 9.2e-33 144.8 80 85.0
PSO478G2000 Papaver somniferum HOM05D004194 ORTHO05D005641 1.7e-31 140.6 75 85.3
Psat6g188680 Pisum sativum HOM05D004194 ORTHO05D005641 6.2e-29 132.1 89 74.2
BcaNung01905 Brassica carinata HOM05D004194 ORTHO05D005641 2.0e-27 127.1 69 88.4
MCO11G430 Micromonas commoda HOM05D004194 ORTHO05D005641 4.1e-25 119.4 136 42.6
Cfa022469 Carpinus fangiana HOM05D004194 ORTHO05D005641 1.2e-24 117.9 135 41.5
Cre01.g021251 Chlamydomonas reinhardtii HOM05D004194 ORTHO05D005641 6.0e-24 115.5 131 43.5
Lalb_Chr07g0178891 Lupinus albus HOM05D000177 ORTHO05D003047 1.8e-20 104.0 110 60.0
Lj4g0019802 Lotus japonicus HOM05D000177 ORTHO05D003047 4.4e-19 99.4 102 61.8
Glyma.17G115600 Glycine max HOM05D000177 ORTHO05D003047 4.6e-16 89.4 106 53.8
Psat6g163800 Pisum sativum HOM05D004194 ORTHO05D037373 3.6e-13 79.7 75 52.0
Psat2g086120 Pisum sativum HOM05D004194 ORTHO05D037373 1.4e-12 77.8 47 72.3
Medtr4g114320 Medicago truncatula HOM05D000177 ORTHO05D003047 1.8e-12 77.4 106 50.0
TPR.G23036 Trifolium pratense HOM05D000177 ORTHO05D003047 1.5e-11 74.3 96 51.0
VMungo1215G0459 Vigna mungo HOM05D000177 ORTHO05D003047 9.9e-11 71.6 105 48.6
Ah.06g192250 Amaranthus hybridus HOM05D004194 ORTHO05D005641 2.9e-10 70.1 90 43.3
SEGI_18549 Sequoiadendron giganteum HOM05D004194 ORTHO05D005641 1.9e-09 67.4 40 77.5
Psat3g096720 Pisum sativum HOM05D004194 ORTHO05D324018 3.2e-09 66.6 35 82.9
C02p04760 Brassica napus HOM05D004194 ORTHO05D005641 7.1e-09 65.5 50 64.0
Psat6g188720 Pisum sativum HOM05D001289 ORTHO05D005641 7.1e-09 65.5 41 78.0
Psat2g086160 Pisum sativum HOM05D004194 ORTHO05D037373 2.1e-08 63.9 59 57.6
Dinv36535 Davidia involucrata HOM05D004156 ORTHO05D003047 7.8e-08 62.0 82 46.3
Cpa.g.sc75.46 Carica papaya HOM05D000177 ORTHO05D003047 1.7e-07 60.8 70 50.0
TAR626G1843 Trochodendron aralioides HOM05D000177 ORTHO05D003047 1.7e-07 60.8 113 38.9
Nn8g39419 Nelumbo nucifera HOM05D000177 ORTHO05D003047 2.3e-07 60.5 77 46.8
Phvul.003G163800 Phaseolus vulgaris HOM05D000177 ORTHO05D003047 2.3e-07 60.5 72 56.9
Thecc.09G124700 Theobroma cacao HOM05D000177 ORTHO05D003047 2.3e-07 60.5 104 41.3
Duzib168G1297 Durio zibethinus HOM05D000177 ORTHO05D003047 1.1e-06 58.2 82 43.9
Psat5g254960 Pisum sativum HOM05D015311 ORTHO05D321322 1.1e-06 58.2 39 71.8
Dinv41519 Davidia involucrata HOM05D000177 ORTHO05D003047 2.5e-06 57.0 89 42.7
PSO170G6713 Papaver somniferum HOM05D000177 ORTHO05D003047 3.3e-06 56.6 75 46.7
TAR383G0080 Trochodendron aralioides HOM05D000177 ORTHO05D003047 3.3e-06 56.6 51 54.9
Aqoxy7G03723 Aquilegia oxysepala HOM05D000177 ORTHO05D003047 4.3e-06 56.2 97 37.1
FvH4_1g03510 Fragaria vesca HOM05D000177 ORTHO05D003047 5.6e-06 55.8 115 34.8
PSO455G0066 Papaver somniferum HOM05D000177 ORTHO05D003047 5.6e-06 55.8 65 49.2
CiPaw.08G012300 Carya illinoinensis HOM05D000177 ORTHO05D003047 9.6e-06 55.1 47 55.3


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