Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.1KP53S Arachis hypogaea HOM05D003842 ORTHO05D004436 1.4e-99 366.3 183 100.0
arahy.Tifrunner.gnm1.ann1.BQYP5G Arachis hypogaea HOM05D003842 ORTHO05D004436 8.3e-81 303.9 159 95.6
arahy.Tifrunner.gnm1.ann1.Z63BRR Arachis hypogaea HOM05D003842 ORTHO05D004436 1.6e-79 299.7 170 90.0
arahy.Tifrunner.gnm1.ann1.CVPH5H Arachis hypogaea HOM05D003842 ORTHO05D004436 7.8e-79 297.4 159 93.7
Glyma.19G186900 Glycine max HOM05D003842 ORTHO05D004436 6.6e-70 267.7 160 83.1
Medtr7g102430 Medicago truncatula HOM05D003842 ORTHO05D004436 1.5e-69 266.5 160 82.5
Psat3g040280 Pisum sativum HOM05D003842 ORTHO05D004436 2.8e-68 262.3 159 82.4
Phvul.001G181800 Phaseolus vulgaris HOM05D003842 ORTHO05D004436 1.1e-67 260.4 160 81.9
Ca_08928_v3 Cicer arietinum L. HOM05D003842 ORTHO05D004436 1.5e-66 256.5 160 80.6
Lj1g0002569 Lotus japonicus HOM05D003842 ORTHO05D004436 3.4e-66 255.4 160 80.0
Ca_08873_v3 Cicer arietinum L. HOM05D003842 ORTHO05D004436 5.8e-66 254.6 160 80.0
Lalb_Chr20g0112381 Lupinus albus HOM05D003842 ORTHO05D004436 1.7e-65 253.1 160 80.0
TPR.G8693 Trifolium pratense HOM05D003842 ORTHO05D004436 1.1e-64 250.4 171 76.0
arahy.Tifrunner.gnm1.ann1.XM7FE2 Arachis hypogaea HOM05D003842 ORTHO05D004436 9.2e-64 247.3 127 95.3
RcHm_v2.0_Chr3g0471001 Rosa chinensis HOM05D003842 ORTHO05D004436 3.3e-61 238.8 154 74.7
CSS0021824 Camellia sinensis var. sinensis HOM05D003842 ORTHO05D004436 7.3e-61 237.7 150 76.0
CSS0023266 Camellia sinensis var. sinensis HOM05D003842 ORTHO05D004436 7.3e-61 237.7 150 76.0
Potri.006G120800 Populus trichocarpa HOM05D003842 ORTHO05D004436 7.3e-61 237.7 158 75.3
Sabra06G0095000 Salix brachista HOM05D003842 ORTHO05D004436 7.3e-61 237.7 158 75.3
Dinv35821 Davidia involucrata HOM05D003842 ORTHO05D004436 9.5e-61 237.3 150 77.3
FAN02G1267 Fragaria x ananassa HOM05D003842 ORTHO05D004436 9.5e-61 237.3 154 74.0
FAN05G0072 Fragaria x ananassa HOM05D003842 ORTHO05D004436 9.5e-61 237.3 154 74.0
FAN05G4099 Fragaria x ananassa HOM05D003842 ORTHO05D004436 9.5e-61 237.3 154 74.0
FAN09G2316 Fragaria x ananassa HOM05D003842 ORTHO05D004436 9.5e-61 237.3 154 74.0
MD12G1104900 Malus domestica HOM05D003842 ORTHO05D004436 9.5e-61 237.3 150 74.0
PGR142G1271 Punica granatum HOM05D003842 ORTHO05D004436 1.2e-60 236.9 161 72.7
FvH4_6g17010 Fragaria vesca HOM05D003842 ORTHO05D004436 1.6e-60 236.5 154 74.0
Manes.08G013802 Manihot esculenta HOM05D003842 ORTHO05D004436 2.8e-60 235.7 143 80.4
Sc20g0005740 Simmondsia chinensis HOM05D003842 ORTHO05D004436 4.7e-60 235.0 150 74.7
GSVIVG01033696001 Vitis vinifera HOM05D003842 ORTHO05D004436 6.2e-60 234.6 168 70.2
Prupe.7G124700 Prunus persica HOM05D003842 ORTHO05D004436 1.8e-59 233.0 150 74.7
vmacro07325 Vaccinium macrocarpon HOM05D003842 ORTHO05D004436 2.3e-59 232.6 150 74.7
Rhsim03G0088500 Rhododendron simsii HOM05D003842 ORTHO05D004436 1.2e-58 230.3 150 73.3
CsaV3_6G040160 Cucumis sativus L. HOM05D003842 ORTHO05D004436 3.4e-58 228.8 172 69.2
MELO3C024492.2 Cucumis melo HOM05D003842 ORTHO05D004436 4.4e-58 228.4 172 69.2
Duzib093G0118 Durio zibethinus HOM05D003842 ORTHO05D004436 4.4e-58 228.4 150 72.7
Gohir.A09G144400 Gossypium hirsutum HOM05D003842 ORTHO05D004436 5.8e-58 228.0 160 68.8
Hma1.2p1_0547F.1_g176430 Hydrangea macrophylla HOM05D003842 ORTHO05D004436 7.5e-58 227.6 151 73.5
Sed0026042 Sechium edule HOM05D003842 ORTHO05D004436 9.9e-58 227.3 148 75.0
Aqoxy1G01066 Aquilegia oxysepala HOM05D003842 ORTHO05D004436 1.3e-57 226.9 150 72.0
Eucgr.K02431 Eucalyptus grandis HOM05D003842 ORTHO05D004436 1.3e-57 226.9 163 69.3
Gorai.006G160800 Gossypium raimondii HOM05D003842 ORTHO05D004436 1.3e-57 226.9 160 68.1
Gohir.D09G140200 Gossypium hirsutum HOM05D003842 ORTHO05D004436 1.7e-57 226.5 154 70.1
Hma1.2p1_0547F.1_g176440 Hydrangea macrophylla HOM05D003842 ORTHO05D004436 1.7e-57 226.5 159 71.1
THA.LOC104818591 Tarenaya hassleriana HOM05D003842 ORTHO05D004436 1.7e-57 226.5 149 71.1
EL10Ac7g16718 Beta vulgaris HOM05D003842 ORTHO05D004436 2.2e-57 226.1 154 69.5
TWI74G0820 Tripterygium wilfordii HOM05D003842 ORTHO05D004436 2.9e-57 225.7 150 72.7
CANSAT80G2389 Cannabis sativa HOM05D003842 ORTHO05D004436 3.7e-57 225.3 164 70.7
Cpa.g.sc5.147 Carica papaya HOM05D003842 ORTHO05D004436 4.9e-57 224.9 146 73.3
AUR62036532 Chenopodium quinoa HOM05D003842 ORTHO05D004436 4.9e-57 224.9 147 73.5
Thecc.05G072900 Theobroma cacao HOM05D003842 ORTHO05D004436 8.3e-57 224.2 150 71.3
Cfa016461 Carpinus fangiana HOM05D003842 ORTHO05D004436 1.4e-56 223.4 149 73.2
CiPaw.09G003300 Carya illinoinensis HOM05D003842 ORTHO05D004436 1.9e-56 223.0 158 70.3
TAR633G0529 Trochodendron aralioides HOM05D003842 ORTHO05D004436 2.4e-56 222.6 150 71.3
Ah.08g211380 Amaranthus hybridus HOM05D003842 ORTHO05D004436 3.2e-56 222.2 170 66.5
Duzib106G1778 Durio zibethinus HOM05D003842 ORTHO05D004436 4.1e-56 221.9 150 70.7
Ciclev10023867m.g Citrus clementina HOM05D003842 ORTHO05D004436 5.4e-56 221.5 143 75.5
AT2G36810 Arabidopsis thaliana HOM05D003842 ORTHO05D004436 7.1e-56 221.1 146 71.9
Actinidia28925 Actinidia chinensis HOM05D003842 ORTHO05D004436 1.2e-55 220.3 143 76.9
CARHR131190 Cardamine hirsuta HOM05D003842 ORTHO05D004436 1.2e-55 220.3 165 66.7
BcaC02g07579 Brassica carinata HOM05D003842 ORTHO05D004436 2.1e-55 219.5 161 67.7
Nn6g35197 Nelumbo nucifera HOM05D003842 ORTHO05D004436 2.1e-55 219.5 143 72.7
Oeu045240.1 Olea europaea HOM05D003842 ORTHO05D004436 7.8e-55 217.6 143 73.4
C04p65510 Brassica napus HOM05D003842 ORTHO05D004436 1.0e-54 217.2 161 67.7
Cc06_g04620 Coffea canephora HOM05D003842 ORTHO05D004436 1.0e-54 217.2 143 72.0
QL07p041738 Quercus lobata HOM05D003842 ORTHO05D004436 1.7e-54 216.5 149 71.8
BolC4t28040H Brassica oleracea HOM05D003842 ORTHO05D004436 2.3e-54 216.1 161 67.1
Migut.L01724 Erythranthe guttata HOM05D003842 ORTHO05D004436 3.0e-54 215.7 143 73.4
MSTRG.26674 Avicennia marina HOM05D003842 ORTHO05D004436 3.9e-54 215.3 148 72.3
AL4G33000 Arabidopsis lyrata HOM05D003842 ORTHO05D004436 5.1e-54 214.9 165 64.8
Sp4g19070 Schrenkiella parvula HOM05D003842 ORTHO05D004436 5.1e-54 214.9 146 70.5
A04p28120 Brassica napus HOM05D003842 ORTHO05D004436 8.6e-54 214.2 161 66.5
BraA04t18297Z Brassica rapa HOM05D003842 ORTHO05D004436 8.6e-54 214.2 161 66.5
Carub.0004s1865 Capsella rubella HOM05D003842 ORTHO05D004436 8.6e-54 214.2 146 69.9
ECA233G4297 Erigeron canadensis HOM05D003842 ORTHO05D004436 1.5e-53 213.4 149 68.5
Thhalv10016131m.g Eutrema salsugineum HOM05D003842 ORTHO05D004436 1.9e-53 213.0 146 72.6
Haze_19462 Corylus avellana HOM05D003842 ORTHO05D004436 7.3e-53 211.1 149 71.1
Solyc09g008490.4 Solanum lycopersicum HOM05D003842 ORTHO05D004436 9.5e-53 210.7 150 69.3
Sopen09g003320 Solanum pennellii HOM05D003842 ORTHO05D004436 9.5e-53 210.7 150 69.3
Gohir.D11G342400 Gossypium hirsutum HOM05D003842 ORTHO05D004436 1.6e-52 209.9 151 68.9
Gorai.007G372400 Gossypium raimondii HOM05D003842 ORTHO05D004436 1.6e-52 209.9 151 68.9
Nitab4.5_0002535g0020 Nicotiana tabacum HOM05D003842 ORTHO05D004436 1.6e-52 209.9 180 60.0
Gohir.A11G323300 Gossypium hirsutum HOM05D003842 ORTHO05D004436 2.8e-52 209.1 151 68.9
Lsat_1_v5_gn_6_28640 Lactuca sativa HOM05D003842 ORTHO05D004436 3.6e-52 208.8 149 67.1
Nitab4.5_0003314g0020 Nicotiana tabacum HOM05D003842 ORTHO05D004436 3.6e-52 208.8 180 60.0
Aa31LG5G22020 Aethionema arabicum HOM05D003842 ORTHO05D004436 1.4e-51 206.8 143 68.5
HanXRQChr13g0400661 Helianthus annuus HOM05D003842 ORTHO05D004436 1.4e-51 206.8 151 66.9
CAN.G1038.13 Capsicum annuum HOM05D003842 ORTHO05D004436 1.3e-49 200.3 141 70.2
PSO063G4107 Papaver somniferum HOM05D003842 ORTHO05D004436 5.4e-48 194.9 148 61.5
PSO339G3623 Papaver somniferum HOM05D003842 ORTHO05D004436 2.7e-47 192.6 148 61.5
ATR0043G024 Amborella trichopoda HOM05D003842 ORTHO05D004436 4.6e-47 191.8 147 62.6
Medtr7g031800 Medicago truncatula HOM05D003842 ORTHO05D004436 6.0e-47 191.4 112 83.0
HPP92_022597 Vanilla planifolia HOM05D003842 ORTHO05D004436 5.1e-46 188.3 161 57.8
ClCG04G009540 Citrullus lanatus HOM05D003842 ORTHO05D004436 1.5e-45 186.8 141 67.4
Peaxi162Scf00435g01013 Petunia axillaris HOM05D003842 ORTHO05D004436 9.9e-42 174.1 124 67.7
Atru.chr8.1722 Acer truncatum HOM05D003842 ORTHO05D004436 4.9e-41 171.8 100 83.0
SGA_v2.0_scaffold224G42922 Striga asiatica HOM05D003842 ORTHO05D004436 2.4e-40 169.5 158 58.2
Zm00001eb003810 Zea mays HOM05D003842 ORTHO05D004436 4.2e-40 168.7 165 53.3
Lj3C992G6 Lonicera japonica HOM05D003842 ORTHO05D004436 1.6e-39 166.8 150 59.3
Actinidia26647 Actinidia chinensis HOM05D003842 ORTHO05D004436 1.5e-37 160.2 103 76.7
arahy.Tifrunner.gnm1.ann1.G8MIGD Arachis hypogaea HOM05D003842 ORTHO05D004436 1.5e-37 160.2 146 62.3
AUR62042272 Chenopodium quinoa HOM05D003842 ORTHO05D004436 2.1e-36 156.4 153 56.2
Mapoly0008s0039 Marchantia polymorpha HOM05D003842 ORTHO05D004436 2.0e-26 123.2 138 44.2
Pp3c2_21970 Physcomitrium patens HOM05D003842 ORTHO05D004436 2.2e-25 119.8 142 40.8
arahy.Tifrunner.gnm1.ann1.F5EPY8 Arachis hypogaea HOM05D007357 ORTHO05D009314 4.9e-25 118.6 78 78.2
SMO137G0253 Selaginella moellendorffii HOM05D003842 ORTHO05D004436 8.7e-22 107.8 148 37.8
DCAR_020802 Daucus carota HOM05D003842 ORTHO05D004436 1.5e-21 107.1 154 39.6
CBR_g53950 Chara braunii HOM05D003842 ORTHO05D004436 3.1e-19 99.4 161 34.8
Actinidia12419 Actinidia chinensis HOM05D003842 ORTHO05D004436 2.9e-17 92.8 97 54.6
arahy.Tifrunner.gnm1.ann1.U3B0HF Arachis hypogaea HOM05D003842 ORTHO05D026908 6.5e-17 91.7 49 89.8
arahy.Tifrunner.gnm1.ann1.L1IIZH Arachis hypogaea HOM05D007357 ORTHO05D009314 1.4e-16 90.5 49 87.8
arahy.Tifrunner.gnm1.ann1.DQT168 Arachis hypogaea HOM05D003290 ORTHO05D003866 3.2e-16 89.4 47 91.5
arahy.Tifrunner.gnm1.ann1.Z72FSA Arachis hypogaea HOM05D003842 ORTHO05D026908 9.3e-16 87.8 46 91.3
Hund20322 Selenicereus undatus HOM05D003842 ORTHO05D004436 1.3e-12 77.4 52 67.3


User provided reference genes

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