Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.1K5T8S Arachis hypogaea HOM05D005975 ORTHO05D007373 0.0e+00 1381.3 689 100.0
Glyma.17G121100 Glycine max HOM05D005975 ORTHO05D007373 2.4e-298 1028.5 609 82.9
Lalb_Chr12g0197601 Lupinus albus HOM05D005975 ORTHO05D007373 4.1e-298 1027.7 610 83.3
VMungo1215G0359 Vigna mungo HOM05D005975 ORTHO05D007373 1.0e-280 969.9 612 78.1
Haze_18619 Corylus avellana HOM05D005975 ORTHO05D007373 1.4e-277 959.5 604 78.6
PGR083G1175 Punica granatum HOM05D005975 ORTHO05D007373 1.8e-277 959.1 605 77.9
VMungo1309G0041 Vigna mungo HOM05D005975 ORTHO05D007373 5.7e-276 954.1 665 71.9
RcHm_v2.0_Chr7g0184651 Rosa chinensis HOM05D005975 ORTHO05D007373 1.7e-275 952.6 604 77.2
Thecc.03G028700 Theobroma cacao HOM05D005975 ORTHO05D007373 1.7e-275 952.6 617 75.5
Lj1g0009400 Lotus japonicus HOM05D005975 ORTHO05D007373 4.9e-275 951.0 608 78.8
MD06G1211600 Malus domestica HOM05D005975 ORTHO05D007373 6.4e-275 950.7 601 76.9
Phvul.009G200500 Phaseolus vulgaris HOM05D005975 ORTHO05D007373 8.3e-275 950.3 603 77.1
Dinv38586 Davidia involucrata HOM05D005975 ORTHO05D007373 5.4e-274 947.6 606 77.9
MD14G1222100 Malus domestica HOM05D005975 ORTHO05D007373 1.2e-273 946.4 601 76.7
CiPaw.15G127100 Carya illinoinensis HOM05D005975 ORTHO05D007373 2.0e-273 945.7 616 76.1
QL10p022556 Quercus lobata HOM05D005975 ORTHO05D007373 3.5e-273 944.9 606 77.1
Atru.chr9.776 Acer truncatum HOM05D005975 ORTHO05D007373 4.6e-273 944.5 603 76.9
Ca_23135_v3 Cicer arietinum L. HOM05D005975 ORTHO05D007373 4.6e-273 944.5 605 77.4
Gorai.007G007400 Gossypium raimondii HOM05D005975 ORTHO05D007373 4.6e-273 944.5 617 74.7
Eucgr.B00701 Eucalyptus grandis HOM05D005975 ORTHO05D007373 5.9e-273 944.1 603 76.3
Glyma.04G152200 Glycine max HOM05D005975 ORTHO05D007373 1.7e-272 942.6 606 76.6
Gohir.A11G007000 Gossypium hirsutum HOM05D005975 ORTHO05D007373 1.7e-272 942.6 617 74.6
Gohir.D11G006100 Gossypium hirsutum HOM05D005975 ORTHO05D007373 3.9e-272 941.4 617 74.2
Glyma.06G210800 Glycine max HOM05D005975 ORTHO05D007373 5.0e-272 941.0 606 76.6
Duzib205G1016 Durio zibethinus HOM05D005975 ORTHO05D007373 1.5e-271 939.5 617 75.4
FvH4_5g12680 Fragaria vesca HOM05D005975 ORTHO05D007373 1.9e-271 939.1 603 76.5
FAN18G3396 Fragaria x ananassa HOM05D005975 ORTHO05D007373 9.5e-271 936.8 603 76.3
Ciclev10019197m.g Citrus clementina HOM05D005975 ORTHO05D007373 1.6e-270 936.0 604 76.0
FAN08G0232 Fragaria x ananassa HOM05D005975 ORTHO05D007373 1.4e-269 932.9 602 76.4
FAN04G2679 Fragaria x ananassa HOM05D005975 ORTHO05D007373 2.3e-269 932.2 603 76.1
FAN13G1844 Fragaria x ananassa HOM05D005975 ORTHO05D007373 3.1e-269 931.8 601 76.0
Potri.015G049900 Populus trichocarpa HOM05D005975 ORTHO05D007373 3.4e-268 928.3 604 76.5
Cpa.g.sc549.1 Carica papaya HOM05D005975 ORTHO05D007373 2.9e-267 925.2 602 76.4
Psat1g024880 Pisum sativum HOM05D005975 ORTHO05D007373 3.2e-266 921.8 603 76.1
Manes.05G139300 Manihot esculenta HOM05D005975 ORTHO05D007373 5.4e-266 921.0 603 74.6
Hma1.2p1_0592F.1_g185285 Hydrangea macrophylla HOM05D005975 ORTHO05D007373 2.0e-265 919.1 603 76.8
TAR374G1293 Trochodendron aralioides HOM05D005975 ORTHO05D007373 5.0e-264 914.4 603 74.5
TAR622G0473 Trochodendron aralioides HOM05D005975 ORTHO05D007373 1.1e-263 913.3 604 73.7
TPR.G10356 Trifolium pratense HOM05D005975 ORTHO05D007373 5.6e-263 911.0 606 74.6
Sed0024013 Sechium edule HOM05D005975 ORTHO05D007373 1.2e-262 909.8 603 75.0
CSS0000913 Camellia sinensis var. sinensis HOM05D005975 ORTHO05D007373 2.8e-262 908.7 621 72.8
Actinidia31028 Actinidia chinensis HOM05D005975 ORTHO05D007373 1.4e-261 906.4 604 74.3
Rhsim08G0136800 Rhododendron simsii HOM05D005975 ORTHO05D007373 2.3e-261 905.6 604 73.8
vmacro17674 Vaccinium macrocarpon HOM05D005975 ORTHO05D007373 4.0e-261 904.8 619 72.5
Potri.012G060200 Populus trichocarpa HOM05D005975 ORTHO05D007373 5.2e-261 904.4 602 75.2
Sabra12G0043300 Salix brachista HOM05D005975 ORTHO05D007373 5.2e-261 904.4 602 75.2
ClCG06G015000 Citrullus lanatus HOM05D005975 ORTHO05D007373 9.8e-260 900.2 603 74.1
MELO3C017289.2 Cucumis melo HOM05D005975 ORTHO05D007373 2.2e-259 899.0 603 74.3
Thhalv10018286m.g Eutrema salsugineum HOM05D005975 ORTHO05D007373 7.1e-258 894.0 602 73.4
THA.LOC104808292 Tarenaya hassleriana HOM05D005975 ORTHO05D007373 7.1e-258 894.0 603 72.3
CsaV3_1G003650 Cucumis sativus L. HOM05D005975 ORTHO05D007373 9.2e-258 893.6 603 74.3
AL2G33760 Arabidopsis lyrata HOM05D005975 ORTHO05D007373 2.7e-257 892.1 602 72.9
Cc04_g07500 Coffea canephora HOM05D005975 ORTHO05D007373 2.7e-257 892.1 609 71.8
EL10Ac5g11254 Beta vulgaris HOM05D005975 ORTHO05D007373 3.5e-257 891.7 605 71.2
Peaxi162Scf00015g00726 Petunia axillaris HOM05D005975 ORTHO05D007373 1.0e-256 890.2 603 73.0
AT1G73930 Arabidopsis thaliana HOM05D005975 ORTHO05D007373 1.7e-256 889.4 602 72.9
CARHR067040 Cardamine hirsuta HOM05D005975 ORTHO05D007373 1.7e-256 889.4 601 72.9
PSO063G1047 Papaver somniferum HOM05D005975 ORTHO05D007373 6.6e-256 887.5 619 70.0
Hund02524 Selenicereus undatus HOM05D005975 ORTHO05D007373 6.6e-256 887.5 604 72.7
AUR62036958 Chenopodium quinoa HOM05D005975 ORTHO05D007373 8.6e-256 887.1 603 71.8
AUR62032193 Chenopodium quinoa HOM05D005975 ORTHO05D007373 1.1e-255 886.7 603 71.6
ECA232G0421 Erigeron canadensis HOM05D005975 ORTHO05D007373 1.9e-255 885.9 603 72.6
Solyc03g119750.4 Solanum lycopersicum HOM05D005975 ORTHO05D007373 9.5e-255 883.6 603 72.0
Sc10g0009550 Simmondsia chinensis HOM05D005975 ORTHO05D007373 2.1e-254 882.5 603 71.5
GSVIVG01008239001 Vitis vinifera HOM05D005975 ORTHO05D007373 2.1e-254 882.5 603 72.6
PSO782G2585 Papaver somniferum HOM05D005975 ORTHO05D007373 4.7e-254 881.3 603 71.1
PGSC0003DMG400005625 Solanum tuberosum HOM05D005975 ORTHO05D007373 4.7e-254 881.3 603 71.6
Lj9A429T54 Lonicera japonica HOM05D005975 ORTHO05D007373 8.1e-254 880.6 607 72.8
Sopen03g038600 Solanum pennellii HOM05D005975 ORTHO05D007373 1.4e-253 879.8 605 71.4
Aqoxy3G03906 Aquilegia oxysepala HOM05D005975 ORTHO05D007373 5.2e-253 877.9 605 70.6
Nitab4.5_0001599g0180 Nicotiana tabacum HOM05D005975 ORTHO05D007373 1.2e-252 876.7 604 71.9
DCAR_015134 Daucus carota HOM05D005975 ORTHO05D007373 7.6e-252 874.0 605 71.4
CAN.G438.116 Capsicum annuum HOM05D005975 ORTHO05D007373 1.7e-251 872.8 619 69.0
HanXRQChr09g0269781 Helianthus annuus HOM05D005975 ORTHO05D007373 4.9e-251 871.3 603 71.5
Hund10002 Selenicereus undatus HOM05D005975 ORTHO05D007373 4.9e-251 871.3 618 68.8
Oeu024324.1 Olea europaea HOM05D005975 ORTHO05D007373 2.4e-250 869.0 606 71.8
Nitab4.5_0000410g0070 Nicotiana tabacum HOM05D005975 ORTHO05D007373 3.5e-249 865.1 588 73.0
Ah.11g047090 Amaranthus hybridus HOM05D005975 ORTHO05D007373 1.3e-248 863.2 604 70.0
BraA02t06937Z Brassica rapa HOM05D005975 ORTHO05D007373 2.1e-246 855.9 608 70.2
A02p18950 Brassica napus HOM05D005975 ORTHO05D007373 4.7e-246 854.7 608 70.4
BolC2t09180H Brassica oleracea HOM05D005975 ORTHO05D007373 1.1e-245 853.6 608 69.9
MSTRG.22940 Avicennia marina HOM05D005975 ORTHO05D007373 1.4e-245 853.2 606 69.8
SGA_v2.0_scaffold25G10981 Striga asiatica HOM05D005975 ORTHO05D007373 2.0e-244 849.4 604 69.7
Lsat_1_v5_gn_3_10441 Lactuca sativa HOM05D005975 ORTHO05D007373 2.6e-244 849.0 587 71.7
BcaB05g24819 Brassica carinata HOM05D005975 ORTHO05D007373 5.8e-244 847.8 607 69.0
BcaC03g15468 Brassica carinata HOM05D005975 ORTHO05D007373 2.9e-243 845.5 608 69.6
Sp5g29130 Schrenkiella parvula HOM05D005975 ORTHO05D007373 2.9e-243 845.5 602 69.9
Migut.I00389 Erythranthe guttata HOM05D005975 ORTHO05D007373 6.4e-243 844.3 609 69.3
C02p31490 Brassica napus HOM05D005975 ORTHO05D007373 1.1e-242 843.6 608 69.4
Aa31LG4G4220 Aethionema arabicum HOM05D005975 ORTHO05D007373 3.5e-241 838.6 602 69.4
MBI19_g38388_MAGBIO Magnolia biondii HOM05D005975 ORTHO05D007373 3.0e-240 835.5 604 68.9
Prupe.5G217600 Prunus persica HOM05D005975 ORTHO05D007373 2.4e-226 789.3 470 82.1
Phvul.003G176900 Phaseolus vulgaris HOM05D005975 ORTHO05D007373 7.1e-226 787.7 475 81.3
unitig_22.g6248 Utricularia gibba HOM05D005975 ORTHO05D007373 6.7e-224 781.2 604 65.7
Glyma.05G013100 Glycine max HOM05D005975 ORTHO05D007373 8.7e-224 780.8 609 68.0
ATR0753G136 Amborella trichopoda HOM05D005975 ORTHO05D007373 4.3e-223 778.5 665 59.1
SalBow5G4970 Salvia bowleyana HOM05D005975 ORTHO05D007373 3.5e-217 758.8 554 68.4
SEGI_09157 Sequoiadendron giganteum HOM05D005975 ORTHO05D007373 1.0e-216 757.3 726 54.7
Sabra15G0077800 Salix brachista HOM05D005975 ORTHO05D007373 5.3e-213 745.0 604 64.4
Os03g0259700 Oryza sativa ssp. japonica HOM05D005975 ORTHO05D007373 1.3e-206 723.8 615 61.8
Pp3c12_18170 Physcomitrium patens HOM05D005975 ORTHO05D007373 5.9e-204 714.9 701 53.4
Zm00001eb011310 Zea mays HOM05D005975 ORTHO05D007373 7.2e-202 708.0 619 60.1
Pp3c4_11450 Physcomitrium patens HOM05D005975 ORTHO05D007373 1.2e-201 707.2 699 52.5
AagrBONN_evm.TU.Sc2ySwM_228.4839 Anthoceros agrestis HOM05D005975 ORTHO05D007373 8.8e-200 701.0 765 49.3
Mapoly0016s0160 Marchantia polymorpha HOM05D005975 ORTHO05D007373 6.1e-193 678.3 800 45.0
COL.COLO4_22722 Corchorus olitorius HOM05D005975 ORTHO05D007373 9.1e-189 664.5 396 81.8
Carub.0002s2070 Capsella rubella HOM05D005975 ORTHO05D007373 6.3e-182 641.7 403 77.2
Nn3g17719 Nelumbo nucifera HOM05D005975 ORTHO05D007373 5.5e-178 628.6 423 72.8
SMO367G0788 Selaginella moellendorffii HOM05D005975 ORTHO05D007373 9.4e-178 627.9 616 52.4
CDE05G1454 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 1.2e-169 600.9 541 58.0
arahy.Tifrunner.gnm1.ann1.CEL6SJ Arachis hypogaea HOM05D005975 ORTHO05D007373 1.2e-159 567.8 289 97.9
CBR_g30105 Chara braunii HOM05D005975 ORTHO05D007373 5.0e-155 552.4 509 54.6
TAR622G1340 Trochodendron aralioides HOM05D005975 ORTHO05D007373 1.4e-128 464.5 364 65.7
PSO074G0001 Papaver somniferum HOM05D005975 ORTHO05D007373 2.3e-123 447.2 311 69.1
CDE05G3359 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 1.5e-122 444.5 397 60.2
HPP92_016579 Vanilla planifolia HOM05D005975 ORTHO05D007373 6.7e-107 392.5 356 57.0
BcaB05g24817 Brassica carinata HOM05D005975 ORTHO05D007373 7.2e-93 345.9 215 78.1
SMO146G0145 Selaginella moellendorffii HOM05D005975 ORTHO05D007373 3.0e-83 313.9 341 51.3
Zm00001eb237870 Zea mays HOM05D005975 ORTHO05D007373 5.3e-80 303.1 554 38.8
HPP92_016580 Vanilla planifolia HOM05D005975 ORTHO05D007373 1.7e-78 298.1 191 74.9
Zm00001eb078910 Zea mays HOM05D005975 ORTHO05D007373 5.0e-62 243.4 152 75.7
Nn3g18207 Nelumbo nucifera HOM05D005975 ORTHO05D007373 8.3e-41 172.9 139 61.2
Cre14.g633500 Chlamydomonas reinhardtii HOM05D005975 ORTHO05D007373 1.1e-37 162.5 324 34.9
CDE05G0573 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 1.9e-21 108.6 89 57.3
Nn4g23789 Nelumbo nucifera HOM05D005975 ORTHO05D007373 1.1e-08 66.2 47 61.7
Nn1g03516 Nelumbo nucifera HOM05D005975 ORTHO05D007373 2.4e-08 65.1 49 63.3
Potri.001G289250 Populus trichocarpa HOM05D005975 ORTHO05D007373 1.7e-06 58.9 48 58.3


User provided reference genes

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