Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.1I2LZG Arachis hypogaea HOM05D004951 ORTHO05D005840 3.3e-122 441.8 234 100.0
arahy.Tifrunner.gnm1.ann1.T7R5G6 Arachis hypogaea HOM05D004951 ORTHO05D005840 8.9e-112 407.1 234 91.5
arahy.Tifrunner.gnm1.ann1.5C4441 Arachis hypogaea HOM05D004951 ORTHO05D005840 1.0e-107 393.7 234 89.7
Ca_08030_v3 Cicer arietinum L. HOM05D004951 ORTHO05D005840 1.9e-85 319.7 234 70.1
Glyma.18G246500 Glycine max HOM05D004951 ORTHO05D005840 7.8e-84 314.3 234 71.8
Psat6g222440 Pisum sativum HOM05D004951 ORTHO05D005840 8.7e-83 310.8 234 68.4
Glyma.09G246500 Glycine max HOM05D004951 ORTHO05D005840 1.6e-81 306.6 234 71.4
Lalb_Chr03g0040521 Lupinus albus HOM05D004951 ORTHO05D005840 2.8e-81 305.8 234 70.9
VMungo1383G3289 Vigna mungo HOM05D004951 ORTHO05D005840 1.4e-80 303.5 234 68.4
TPR.G15148 Trifolium pratense HOM05D004951 ORTHO05D005840 6.4e-78 294.7 235 66.8
Phvul.008G050600 Phaseolus vulgaris HOM05D004951 ORTHO05D005840 1.9e-77 293.1 234 68.8
Lj1g0015493 Lotus japonicus HOM05D004951 ORTHO05D005840 2.1e-76 289.7 234 63.7
GSVIVG01009867001 Vitis vinifera HOM05D004951 ORTHO05D005840 2.0e-71 273.1 235 63.4
Atru.chr2.1521 Acer truncatum HOM05D004951 ORTHO05D005840 5.8e-71 271.6 233 62.7
Gohir.A07G207200 Gossypium hirsutum HOM05D004951 ORTHO05D005840 1.6e-68 263.5 231 62.3
Hma1.2p1_0638F.1_g193670 Hydrangea macrophylla HOM05D004951 ORTHO05D005840 1.6e-68 263.5 236 61.0
Gohir.A09G014000 Gossypium hirsutum HOM05D004951 ORTHO05D005840 3.5e-68 262.3 231 61.9
Ciclev10002352m.g Citrus clementina HOM05D004951 ORTHO05D005840 6.0e-68 261.5 233 60.5
Gohir.D02G097900 Gossypium hirsutum HOM05D004951 ORTHO05D005840 6.0e-68 261.5 231 61.9
Gorai.005G111600 Gossypium raimondii HOM05D004951 ORTHO05D005840 7.9e-68 261.2 231 61.9
CSS0031211 Camellia sinensis var. sinensis HOM05D004951 ORTHO05D005840 1.3e-67 260.4 237 62.0
Medtr7g080860 Medicago truncatula HOM05D004951 ORTHO05D005840 2.3e-67 259.6 238 59.7
TAR381G0914 Trochodendron aralioides HOM05D004951 ORTHO05D005840 2.3e-67 259.6 235 62.1
COL.COLO4_26170 Corchorus olitorius HOM05D004951 ORTHO05D005840 6.7e-67 258.1 232 60.8
Cfa013928 Carpinus fangiana HOM05D004951 ORTHO05D005840 1.1e-66 257.3 235 60.4
Thecc.08G041400 Theobroma cacao HOM05D004951 ORTHO05D005840 1.5e-66 256.9 232 61.6
Actinidia15407 Actinidia chinensis HOM05D004951 ORTHO05D005840 1.9e-66 256.5 225 60.4
CiPaw.08G064600 Carya illinoinensis HOM05D004951 ORTHO05D005840 5.6e-66 255.0 232 61.6
Duzib116G0591 Durio zibethinus HOM05D004951 ORTHO05D005840 5.6e-66 255.0 231 61.5
QL02p011069 Quercus lobata HOM05D004951 ORTHO05D005840 5.6e-66 255.0 232 60.8
Dinv39502 Davidia involucrata HOM05D004951 ORTHO05D005840 7.4e-66 254.6 238 60.9
Actinidia37925 Actinidia chinensis HOM05D004951 ORTHO05D005840 1.3e-65 253.8 237 60.3
Gohir.A07G207300 Gossypium hirsutum HOM05D004951 ORTHO05D005840 1.3e-65 253.8 193 68.9
Cpa.g.sc26.26 Carica papaya HOM05D004951 ORTHO05D005840 1.6e-65 253.4 229 60.7
Rhsim06G0023300 Rhododendron simsii HOM05D004951 ORTHO05D005840 2.8e-65 252.7 234 60.7
vmacro21713 Vaccinium macrocarpon HOM05D004951 ORTHO05D005840 2.8e-65 252.7 224 61.6
COL.COLO4_20267 Corchorus olitorius HOM05D004951 ORTHO05D005840 8.1e-65 251.1 193 68.9
Manes.05G149800 Manihot esculenta HOM05D004951 ORTHO05D005840 8.1e-65 251.1 231 59.3
vmacro14381 Vaccinium macrocarpon HOM05D004951 ORTHO05D005840 1.1e-64 250.8 199 65.3
Lalb_Chr01g0021631 Lupinus albus HOM05D004951 ORTHO05D005840 3.1e-64 249.2 232 59.9
PGR031G1064 Punica granatum HOM05D004951 ORTHO05D005840 3.1e-64 249.2 232 59.5
Eucgr.E00855 Eucalyptus grandis HOM05D004951 ORTHO05D005840 1.2e-63 247.3 234 58.5
CsaV3_3G045700 Cucumis sativus L. HOM05D004951 ORTHO05D005840 7.6e-63 244.6 233 56.7
ClCG11G002570 Citrullus lanatus HOM05D004951 ORTHO05D005840 1.0e-62 244.2 230 56.5
Sc02g0008460 Simmondsia chinensis HOM05D004951 ORTHO05D005840 2.2e-62 243.0 234 58.5
MD10G1149500 Malus domestica HOM05D004951 ORTHO05D005840 2.9e-62 242.7 231 57.1
THA.LOC104809415 Tarenaya hassleriana HOM05D004951 ORTHO05D005840 3.8e-62 242.3 230 57.8
MD05G1155200 Malus domestica HOM05D004951 ORTHO05D005840 4.9e-62 241.9 235 57.4
Potri.005G236800 Populus trichocarpa HOM05D004951 ORTHO05D005840 4.9e-62 241.9 234 56.4
CANSAT78G0251 Cannabis sativa HOM05D004951 ORTHO05D005840 8.4e-62 241.1 236 54.7
Nn5g29279 Nelumbo nucifera HOM05D004951 ORTHO05D005840 1.4e-61 240.4 232 56.0
MSTRG.1208 Avicennia marina HOM05D004951 ORTHO05D005840 7.1e-61 238.0 233 56.7
Sed0001853 Sechium edule HOM05D004951 ORTHO05D005840 9.3e-61 237.7 230 56.5
ClCG05G018480 Citrullus lanatus HOM05D004951 ORTHO05D005840 1.2e-60 237.3 193 62.7
Sabra05G0183100 Salix brachista HOM05D004951 ORTHO05D005840 3.5e-60 235.7 234 55.6
PSO675G8856 Papaver somniferum HOM05D004951 ORTHO05D005840 4.6e-60 235.3 231 55.8
Lsat_1_v5_gn_8_80440 Lactuca sativa HOM05D004951 ORTHO05D005840 7.9e-60 234.6 228 56.1
Ah.02g126690 Amaranthus hybridus HOM05D004951 ORTHO05D005840 1.8e-59 233.4 228 56.1
Potri.002G024601 Populus trichocarpa HOM05D004951 ORTHO05D005840 2.3e-59 233.0 234 55.1
PGR031G3408 Punica granatum HOM05D004951 ORTHO05D005840 2.3e-59 233.0 198 64.1
Dinv31828 Davidia involucrata HOM05D004951 ORTHO05D005840 5.7e-58 228.4 199 62.3
Thhalv10019169m.g Eutrema salsugineum HOM05D004951 ORTHO05D005840 7.4e-58 228.0 193 59.6
Carub.0002s2250 Capsella rubella HOM05D004951 ORTHO05D005840 9.6e-58 227.6 193 58.5
Eucgr.F02088 Eucalyptus grandis HOM05D004951 ORTHO05D005840 9.6e-58 227.6 234 55.6
Cc10_g01890 Coffea canephora HOM05D004951 ORTHO05D005840 4.8e-57 225.3 233 53.6
PSO541G0679 Papaver somniferum HOM05D004951 ORTHO05D005840 8.2e-57 224.6 213 55.9
Solyc05g054140.3 Solanum lycopersicum HOM05D004951 ORTHO05D005840 1.1e-56 224.2 231 52.8
Sopen05g032630 Solanum pennellii HOM05D004951 ORTHO05D005840 1.4e-56 223.8 231 52.8
AL2G35650 Arabidopsis lyrata HOM05D004951 ORTHO05D005840 1.8e-56 223.4 193 57.5
CARHR069060 Cardamine hirsuta HOM05D004951 ORTHO05D005840 1.8e-56 223.4 193 57.5
AUR62035728 Chenopodium quinoa HOM05D004951 ORTHO05D005840 1.8e-56 223.4 229 56.8
PSO675G7262 Papaver somniferum HOM05D004951 ORTHO05D005840 2.4e-56 223.0 231 51.9
EL10Ac1g02264 Beta vulgaris HOM05D004951 ORTHO05D005840 5.3e-56 221.9 235 53.6
AUR62035440 Chenopodium quinoa HOM05D004951 ORTHO05D005840 6.9e-56 221.5 229 56.3
Prupe.8G188100 Prunus persica HOM05D004951 ORTHO05D005840 9.0e-56 221.1 228 54.8
BcaC03g15607 Brassica carinata HOM05D004951 ORTHO05D005840 1.2e-55 220.7 193 56.5
BolC2t09323H Brassica oleracea HOM05D004951 ORTHO05D005840 1.2e-55 220.7 193 56.5
BraA02t07047Z Brassica rapa HOM05D004951 ORTHO05D005840 1.5e-55 220.3 193 56.5
Oeu056857.1 Olea europaea HOM05D004951 ORTHO05D005840 1.5e-55 220.3 193 60.1
CAN.G103.3 Capsicum annuum HOM05D004951 ORTHO05D005840 2.0e-55 219.9 231 51.9
SGA_v2.0_scaffold11G05895 Striga asiatica HOM05D004951 ORTHO05D005840 2.0e-55 219.9 231 52.8
A02p20120 Brassica napus HOM05D004951 ORTHO05D005840 2.6e-55 219.5 189 57.1
TWI56G1488 Tripterygium wilfordii HOM05D004951 ORTHO05D005840 2.6e-55 219.5 232 53.0
ECA236G4786 Erigeron canadensis HOM05D004951 ORTHO05D005840 3.4e-55 219.2 191 60.7
Oeu024529.1 Olea europaea HOM05D004951 ORTHO05D005840 4.5e-55 218.8 233 53.6
Atru.chr13.322 Acer truncatum HOM05D004951 ORTHO05D005840 5.9e-55 218.4 200 61.5
C02p33810 Brassica napus HOM05D004951 ORTHO05D005840 5.9e-55 218.4 189 56.6
TWI34G1799 Tripterygium wilfordii HOM05D004951 ORTHO05D005840 5.9e-55 218.4 232 51.3
PGSC0003DMG400008458 Solanum tuberosum HOM05D004951 ORTHO05D005840 1.0e-54 217.6 231 51.9
AT1G75670 Arabidopsis thaliana HOM05D004951 ORTHO05D005840 1.7e-54 216.9 193 56.0
Nitab4.5_0001242g0070 Nicotiana tabacum HOM05D004951 ORTHO05D005840 1.7e-54 216.9 231 50.6
Sp5g30770 Schrenkiella parvula HOM05D004951 ORTHO05D005840 1.7e-54 216.9 193 56.0
SalBow8G2430 Salvia bowleyana HOM05D004951 ORTHO05D005840 3.8e-54 215.7 231 53.7
Actinidia28598 Actinidia chinensis HOM05D004951 ORTHO05D005840 8.5e-54 214.5 231 55.4
Aa31LG4G5890 Aethionema arabicum HOM05D004951 ORTHO05D005840 8.5e-54 214.5 229 54.1
HanXRQChr10g0300951 Helianthus annuus HOM05D004951 ORTHO05D005840 4.2e-53 212.2 182 58.8
HanXRQChr02g0039471 Helianthus annuus HOM05D004951 ORTHO05D005840 9.3e-53 211.1 228 52.2
TAR625G0428 Trochodendron aralioides HOM05D004951 ORTHO05D005840 1.2e-52 210.7 200 58.5
Sed0010580 Sechium edule HOM05D004951 ORTHO05D005840 6.1e-52 208.4 201 54.2
RcHm_v2.0_Chr6g0282531 Rosa chinensis HOM05D004951 ORTHO05D005840 5.1e-51 205.3 243 50.2
Migut.G00984 Erythranthe guttata HOM05D004951 ORTHO05D005840 6.7e-51 204.9 201 55.2
BcaC08g47055 Brassica carinata HOM05D004951 ORTHO05D005840 8.7e-51 204.5 182 55.5
HPP92_017328 Vanilla planifolia HOM05D004951 ORTHO05D005840 1.1e-50 204.1 229 51.1
FvH4_2g17590 Fragaria vesca HOM05D004951 ORTHO05D005840 2.5e-50 203.0 244 50.0
Nitab4.5_0014171g0010 Nicotiana tabacum HOM05D004951 ORTHO05D005840 2.5e-50 203.0 257 45.9
Haze_22610 Corylus avellana HOM05D004951 ORTHO05D005840 4.3e-50 202.2 254 48.8
Peaxi162Scf00186g00023 Petunia axillaris HOM05D004951 ORTHO05D005840 4.3e-50 202.2 249 47.4
Aqoxy3G00621 Aquilegia oxysepala HOM05D004951 ORTHO05D005840 5.7e-50 201.8 246 49.6
Migut.C00815 Erythranthe guttata HOM05D004951 ORTHO05D005840 7.4e-50 201.4 193 54.9
FAN24G1417 Fragaria x ananassa HOM05D004951 ORTHO05D005840 1.3e-49 200.7 244 49.6
FAN15G2157 Fragaria x ananassa HOM05D004951 ORTHO05D005840 3.7e-49 199.1 244 49.2
Nn1g08637 Nelumbo nucifera HOM05D004951 ORTHO05D005840 6.3e-49 198.4 234 49.6
FAN15G3167 Fragaria x ananassa HOM05D004951 ORTHO05D005840 5.3e-48 195.3 179 58.1
Gohir.A02G093500 Gossypium hirsutum HOM05D004951 ORTHO05D005840 4.5e-47 192.2 143 69.2
FAN27G0910 Fragaria x ananassa HOM05D004951 ORTHO05D005840 7.7e-47 191.4 262 46.2
CDE12G0586 Ceratophyllum demersum HOM05D004951 ORTHO05D005840 1.0e-46 191.0 188 53.7
CDE05G3598 Ceratophyllum demersum HOM05D004951 ORTHO05D005840 6.1e-44 181.8 180 52.2
Os12g0533600 Oryza sativa ssp. japonica HOM05D004951 ORTHO05D005840 1.4e-43 180.6 235 44.3
DCAR_008455 Daucus carota HOM05D004951 ORTHO05D005840 1.1e-42 177.6 154 58.4
BcaB05g24929 Brassica carinata HOM05D000120 ORTHO05D000068 3.1e-40 169.5 171 52.6
Lj4A795G31 Lonicera japonica HOM05D004951 ORTHO05D005840 6.9e-40 168.3 124 71.0
MBI05_g38365_MAGBIO Magnolia biondii HOM05D004951 ORTHO05D005840 2.6e-39 166.4 232 44.8
unitig_8.g4914 Utricularia gibba HOM05D004951 ORTHO05D005840 1.0e-38 164.5 197 47.7
ATR0068G029 Amborella trichopoda HOM05D004951 ORTHO05D005840 3.2e-37 159.5 233 41.6
Os06g0168400 Oryza sativa ssp. japonica HOM05D004951 ORTHO05D005840 2.1e-36 156.8 155 51.0
Oeu024522.1 Olea europaea HOM05D004951 ORTHO05D005840 1.8e-35 153.7 225 44.9
SEGI_29847 Sequoiadendron giganteum HOM05D004951 ORTHO05D005840 2.0e-34 150.2 221 41.2
Zm00001eb410680 Zea mays HOM05D004951 ORTHO05D005840 3.3e-34 149.4 246 39.8
Mapoly0115s0026 Marchantia polymorpha HOM05D004951 ORTHO05D005840 1.1e-32 144.4 231 39.4
CAN.G230.10 Capsicum annuum HOM05D004951 ORTHO05D005840 1.0e-30 137.9 135 54.1
Pp3c15_23380 Physcomitrium patens HOM05D004951 ORTHO05D005840 2.7e-28 129.8 185 41.1
AagrBONN_evm.TU.Sc2ySwM_344.4244 Anthoceros agrestis HOM05D004951 ORTHO05D005840 8.8e-27 124.8 188 39.9
AagrBONN_evm.TU.Sc2ySwM_368.3390 Anthoceros agrestis HOM05D004951 ORTHO05D005840 8.8e-27 124.8 195 39.5
SMO356G0424 Selaginella moellendorffii HOM05D004951 ORTHO05D005840 6.3e-25 118.6 179 39.1
PGSC0003DMG400019052 Solanum tuberosum HOM05D004951 ORTHO05D005840 7.2e-21 105.1 116 49.1
Hma1.2p1_2299F.1_g319190 Hydrangea macrophylla HOM05D004951 ORTHO05D005840 6.1e-20 102.1 75 70.7
Sed0021847 Sechium edule HOM05D004951 ORTHO05D005840 1.0e-19 101.3 144 41.7
ATR0585G020 Amborella trichopoda HOM05D004951 ORTHO05D005840 3.7e-17 92.8 88 54.5
SEGI_15858 Sequoiadendron giganteum HOM05D004951 ORTHO05D005840 3.1e-16 89.7 95 50.5
BolC6t40000H Brassica oleracea HOM05D004951 ORTHO05D005840 1.2e-10 71.2 62 50.0
Cre02.g086750 Chlamydomonas reinhardtii HOM05D004951 ORTHO05D005840 7.0e-08 62.0 183 26.2
Hma1.2p1_0312F.1_g121470 Hydrangea macrophylla HOM05D004951 ORTHO05D005840 2.3e-06 57.0 77 45.5


User provided reference genes

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