Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.1G4SNU Arachis hypogaea HOM05D004705 ORTHO05D005595 0.0e+00 1318.9 682 100.0
arahy.Tifrunner.gnm1.ann1.WXP04W Arachis hypogaea HOM05D004705 ORTHO05D005595 0.0e+00 1232.2 689 94.0
Glyma.15G011700 Glycine max HOM05D004705 ORTHO05D005595 5.0e-240 834.7 775 60.8
Lj3g0018532 Lotus japonicus HOM05D004705 ORTHO05D005595 1.4e-237 826.6 735 62.7
Phvul.005G173800 Phaseolus vulgaris HOM05D004705 ORTHO05D005595 1.4e-234 816.6 756 61.2
Ca_01096_v3 Cicer arietinum L. HOM05D004705 ORTHO05D005595 5.2e-229 798.1 688 63.5
Glyma.13G362100 Glycine max HOM05D004705 ORTHO05D005595 2.6e-228 795.8 759 59.7
Medtr2g102680 Medicago truncatula HOM05D004705 ORTHO05D005595 1.6e-222 776.5 720 61.2
TPR.G37249 Trifolium pratense HOM05D004705 ORTHO05D005595 8.1e-222 774.2 744 58.6
Lalb_Chr24g0395661 Lupinus albus HOM05D004705 ORTHO05D005595 4.9e-219 765.0 643 63.9
Lalb_Chr22g0351091 Lupinus albus HOM05D004705 ORTHO05D005595 2.1e-217 759.6 698 60.6
Psat5g299960 Pisum sativum HOM05D004705 ORTHO05D005595 2.5e-215 752.7 667 61.0
Thecc.06G077700 Theobroma cacao HOM05D004705 ORTHO05D005595 8.1e-214 747.7 740 56.6
VMungo1080G1183 Vigna mungo HOM05D004705 ORTHO05D005595 1.8e-213 746.5 750 57.7
QL05p026953 Quercus lobata HOM05D004705 ORTHO05D005595 1.5e-212 743.4 727 57.8
Prupe.3G077300 Prunus persica HOM05D004705 ORTHO05D005595 8.4e-211 737.6 737 57.5
Haze_16487 Corylus avellana HOM05D004705 ORTHO05D005595 1.1e-210 737.3 737 57.9
Duzib235G0494 Durio zibethinus HOM05D004705 ORTHO05D005595 2.1e-209 733.0 721 57.4
Gohir.A02G124100 Gossypium hirsutum HOM05D004705 ORTHO05D005595 1.3e-208 730.3 706 57.6
MD17G1201400 Malus domestica HOM05D004705 ORTHO05D005595 1.2e-206 723.8 751 55.4
RcHm_v2.0_Chr2g0137071 Rosa chinensis HOM05D004705 ORTHO05D005595 6.2e-206 721.5 738 55.1
GSVIVG01017208001 Vitis vinifera HOM05D004705 ORTHO05D005595 1.8e-205 719.9 686 58.9
Potri.003G058600 Populus trichocarpa HOM05D004705 ORTHO05D005595 2.4e-205 719.5 746 56.3
Cfa002032 Carpinus fangiana HOM05D004705 ORTHO05D005595 1.2e-204 717.2 734 56.9
FvH4_6g30700 Fragaria vesca HOM05D004705 ORTHO05D005595 2.0e-204 716.5 736 55.3
Lalb_Chr25g0279551 Lupinus albus HOM05D004705 ORTHO05D005595 3.8e-203 712.2 699 59.5
Gohir.D03G064900 Gossypium hirsutum HOM05D004705 ORTHO05D005595 1.9e-202 709.9 743 55.3
FAN09G0848 Fragaria x ananassa HOM05D004705 ORTHO05D005595 5.4e-202 708.4 738 54.7
Gorai.002G057500 Gossypium raimondii HOM05D004705 ORTHO05D005595 9.3e-202 707.6 743 55.2
Ciclev10024977m.g Citrus clementina HOM05D004705 ORTHO05D005595 2.1e-201 706.4 752 55.3
MELO3C012944.2 Cucumis melo HOM05D004705 ORTHO05D005595 5.1e-200 701.8 727 54.7
Dinv38075 Davidia involucrata HOM05D004705 ORTHO05D005595 6.6e-200 701.4 795 52.2
ClCG07G012910 Citrullus lanatus HOM05D004705 ORTHO05D005595 1.5e-199 700.3 729 55.3
Manes.04G119400 Manihot esculenta HOM05D004705 ORTHO05D005595 1.5e-199 700.3 740 56.4
Duzib160G0698 Durio zibethinus HOM05D004705 ORTHO05D005595 3.3e-199 699.1 701 56.6
FAN02G3197 Fragaria x ananassa HOM05D004705 ORTHO05D005595 4.3e-199 698.7 736 54.1
arahy.Tifrunner.gnm1.ann1.HFN88V Arachis hypogaea HOM05D004705 ORTHO05D005595 5.6e-199 698.4 704 57.2
Atru.chr1.3167 Acer truncatum HOM05D004705 ORTHO05D005595 1.6e-198 696.8 736 54.8
CsaV3_3G026670 Cucumis sativus L. HOM05D004705 ORTHO05D005595 4.8e-198 695.3 714 55.0
FAN14G4493 Fragaria x ananassa HOM05D004705 ORTHO05D005595 6.2e-198 694.9 703 55.9
FAN05G0816 Fragaria x ananassa HOM05D004705 ORTHO05D005595 3.1e-197 692.6 736 53.8
PGR031G3493 Punica granatum HOM05D004705 ORTHO05D005595 5.3e-197 691.8 725 56.3
Potri.001G175500 Populus trichocarpa HOM05D004705 ORTHO05D005595 6.9e-197 691.4 725 55.4
CiPaw.01G242500 Carya illinoinensis HOM05D004705 ORTHO05D005595 1.2e-196 690.6 739 54.5
CANSAT56G4120 Cannabis sativa HOM05D004705 ORTHO05D005595 3.4e-196 689.1 747 54.4
Sed0012410 Sechium edule HOM05D004705 ORTHO05D005595 3.2e-194 682.6 720 53.5
TWI75G0140 Tripterygium wilfordii HOM05D004705 ORTHO05D005595 4.2e-194 682.2 754 52.5
TAR626G1984 Trochodendron aralioides HOM05D004705 ORTHO05D005595 7.9e-193 677.9 750 52.5
vmacro16932 Vaccinium macrocarpon HOM05D004705 ORTHO05D005595 2.8e-190 669.5 803 49.9
CSS0020826 Camellia sinensis var. sinensis HOM05D004705 ORTHO05D005595 7.6e-188 661.4 766 52.0
CSS0001459 Camellia sinensis var. sinensis HOM05D004705 ORTHO05D005595 1.7e-187 660.2 766 52.0
Hund00574 Selenicereus undatus HOM05D004705 ORTHO05D005595 6.0e-185 651.7 722 52.2
Manes.11G049500 Manihot esculenta HOM05D004705 ORTHO05D005595 1.3e-184 650.6 628 57.8
CAN.G438.96 Capsicum annuum HOM05D004705 ORTHO05D005595 1.5e-183 647.1 812 48.4
Peaxi162Scf00015g00532 Petunia axillaris HOM05D004705 ORTHO05D005595 1.5e-183 647.1 836 48.0
Sp3g13840 Schrenkiella parvula HOM05D004705 ORTHO05D005595 1.5e-183 647.1 724 51.0
arahy.Tifrunner.gnm1.ann1.AD4PBH Arachis hypogaea HOM05D004705 ORTHO05D005595 1.3e-182 644.0 704 54.5
PGSC0003DMG400005697 Solanum tuberosum HOM05D004705 ORTHO05D005595 1.6e-182 643.7 822 48.8
THA.LOC104818041 Tarenaya hassleriana HOM05D004705 ORTHO05D005595 1.1e-181 641.0 717 52.7
Lj5A66T57 Lonicera japonica HOM05D004705 ORTHO05D005595 3.1e-181 639.4 805 48.2
Solyc03g119940.3 Solanum lycopersicum HOM05D004705 ORTHO05D005595 9.0e-181 637.9 821 47.7
Sopen03g038820 Solanum pennellii HOM05D004705 ORTHO05D005595 9.0e-181 637.9 822 48.2
RhsimUnG0009400 Rhododendron simsii HOM05D004705 ORTHO05D005595 4.5e-180 635.6 841 47.9
Rhsim12G0195000 Rhododendron simsii HOM05D004705 ORTHO05D005595 5.8e-180 635.2 841 47.9
DCAR_025463 Daucus carota HOM05D004705 ORTHO05D005595 7.6e-180 634.8 832 47.4
AL3G28180 Arabidopsis lyrata HOM05D004705 ORTHO05D005595 4.9e-179 632.1 751 49.1
EL10Ac9g21966 Beta vulgaris HOM05D004705 ORTHO05D005595 6.5e-179 631.7 770 48.7
Nitab4.5_0004817g0040 Nicotiana tabacum HOM05D004705 ORTHO05D005595 1.1e-178 630.9 802 48.4
Aa31LG8G2800 Aethionema arabicum HOM05D004705 ORTHO05D005595 1.4e-178 630.6 704 52.7
HanXRQChr02g0032571 Helianthus annuus HOM05D004705 ORTHO05D005595 1.4e-178 630.6 759 50.2
A05p33830 Brassica napus HOM05D004705 ORTHO05D005595 1.9e-178 630.2 720 51.5
Oeu051920.1 Olea europaea HOM05D004705 ORTHO05D005595 2.5e-178 629.8 823 47.8
Cc04_g03760 Coffea canephora HOM05D004705 ORTHO05D005595 5.5e-178 628.6 815 48.1
Nn8g39334 Nelumbo nucifera HOM05D004705 ORTHO05D005595 1.6e-177 627.1 745 48.6
Carub.0003s1530 Capsella rubella HOM05D004705 ORTHO05D005595 2.7e-177 626.3 725 50.6
AT3G15550 Arabidopsis thaliana HOM05D004705 ORTHO05D005595 4.6e-177 625.5 749 49.0
ECA247G3649 Erigeron canadensis HOM05D004705 ORTHO05D005595 2.3e-176 623.2 792 49.0
C05p51460 Brassica napus HOM05D004705 ORTHO05D005595 3.0e-176 622.9 712 52.8
CARHR090640 Cardamine hirsuta HOM05D004705 ORTHO05D005595 3.0e-176 622.9 711 51.3
BcaC05g28954 Brassica carinata HOM05D004705 ORTHO05D005595 5.1e-176 622.1 712 52.5
BraA01t03898Z Brassica rapa HOM05D004705 ORTHO05D005595 3.3e-175 619.4 698 51.6
Lsat_1_v5_gn_1_33801 Lactuca sativa HOM05D004705 ORTHO05D005595 5.7e-175 618.6 762 48.0
A01p38480 Brassica napus HOM05D004705 ORTHO05D005595 1.6e-174 617.1 698 51.6
TAR383G1056 Trochodendron aralioides HOM05D004705 ORTHO05D005595 3.7e-174 615.9 751 49.5
Aqoxy7G01953 Aquilegia oxysepala HOM05D004705 ORTHO05D005595 1.1e-173 614.4 770 49.1
Thhalv10020202m.g Eutrema salsugineum HOM05D004705 ORTHO05D005595 2.4e-173 613.2 708 50.8
C01p48810 Brassica napus HOM05D004705 ORTHO05D005595 3.1e-173 612.8 696 51.9
BcaB06g29595 Brassica carinata HOM05D004705 ORTHO05D005595 5.3e-173 612.1 711 51.5
BcaC09g48528 Brassica carinata HOM05D004705 ORTHO05D005595 4.5e-172 609.0 698 51.3
SGA_v2.0_scaffold153G36966 Striga asiatica HOM05D004705 ORTHO05D005595 1.7e-171 607.1 770 49.2
BolC1t04836H Brassica oleracea HOM05D004705 ORTHO05D005595 2.9e-171 606.3 694 51.4
AUR62016408 Chenopodium quinoa HOM05D004705 ORTHO05D005595 3.8e-171 605.9 774 46.0
Sc12g0008970 Simmondsia chinensis HOM05D004705 ORTHO05D005595 3.8e-171 605.9 759 47.4
Dinv30551 Davidia involucrata HOM05D004705 ORTHO05D005595 4.2e-170 602.4 744 49.9
Eucgr.J03029 Eucalyptus grandis HOM05D004705 ORTHO05D005595 7.2e-170 601.7 731 51.3
BraA05t22205Z Brassica rapa HOM05D004705 ORTHO05D005595 7.9e-169 598.2 711 49.9
SalBow5G4930 Salvia bowleyana HOM05D004705 ORTHO05D005595 2.0e-167 593.6 635 53.5
Sabra01G0137000 Salix brachista HOM05D004705 ORTHO05D005595 9.7e-167 591.3 699 51.6
PSO017G1026 Papaver somniferum HOM05D004705 ORTHO05D005595 2.2e-166 590.1 737 47.8
PSO170G5959 Papaver somniferum HOM05D004705 ORTHO05D005595 2.2e-166 590.1 737 47.6
BolC5t33833H Brassica oleracea HOM05D004705 ORTHO05D005595 3.1e-165 586.3 711 50.5
BcaB04g20914 Brassica carinata HOM05D004705 ORTHO05D005595 4.1e-165 585.9 697 50.2
AUR62011594 Chenopodium quinoa HOM05D004705 ORTHO05D005595 6.9e-165 585.1 559 56.0
MSTRG.20727 Avicennia marina HOM05D004705 ORTHO05D005595 1.3e-163 580.9 829 44.3
Cpa.g.c32383.1 Carica papaya HOM05D004705 ORTHO05D005595 1.1e-162 577.8 694 52.0
COL.COLO4_12857 Corchorus olitorius HOM05D004705 ORTHO05D005595 1.4e-160 570.9 741 47.9
Oeu000022.1 Olea europaea HOM05D004705 ORTHO05D005595 2.0e-159 567.0 809 44.5
MSTRG.17159 Avicennia marina HOM05D004705 ORTHO05D005595 9.1e-157 558.1 816 44.0
MBI04_g43364_MAGBIO Magnolia biondii HOM05D004705 ORTHO05D005595 1.2e-156 557.8 596 52.7
Nitab4.5_0000410g0340 Nicotiana tabacum HOM05D004705 ORTHO05D005595 2.8e-150 536.6 442 63.6
unitig_26.g8885 Utricularia gibba HOM05D004705 ORTHO05D005595 7.7e-148 528.5 626 49.0
Nn2g11880 Nelumbo nucifera HOM05D004705 ORTHO05D005595 2.8e-142 510.0 616 49.8
Zm00001eb122560 Zea mays HOM05D004705 ORTHO05D005595 2.8e-142 510.0 827 41.4
Os01g0176500 Oryza sativa ssp. japonica HOM05D004705 ORTHO05D005595 9.1e-141 505.0 838 40.2
ATR0083G057 Amborella trichopoda HOM05D004705 ORTHO05D005595 5.7e-135 485.7 646 45.0
CDE01G0719 Ceratophyllum demersum HOM05D004705 ORTHO05D005595 9.1e-133 478.4 707 42.6
THA.LOC104812485 Tarenaya hassleriana HOM05D004705 ORTHO05D005595 8.6e-131 471.9 486 52.5
Migut.B01589 Erythranthe guttata HOM05D004705 ORTHO05D005595 8.6e-123 445.3 679 43.6
unitig_61.g26415 Utricularia gibba HOM05D004705 ORTHO05D005595 9.5e-122 441.8 484 51.7
Ah.01g021140 Amaranthus hybridus HOM05D004705 ORTHO05D005595 5.0e-115 419.5 742 37.5
SEGI_27484 Sequoiadendron giganteum HOM05D004705 ORTHO05D005595 5.1e-107 392.9 740 37.4
SEGI_13982 Sequoiadendron giganteum HOM05D004705 ORTHO05D005595 5.8e-95 352.8 574 40.2
MBI01_g15493_MAGBIO Magnolia biondii HOM05D004705 ORTHO05D005595 2.3e-91 340.9 667 37.6
Pp3c23_2990 Physcomitrium patens HOM05D004705 ORTHO05D005595 1.5e-87 328.2 472 41.7
Pp3c8_15560 Physcomitrium patens HOM05D004705 ORTHO05D005595 4.2e-85 320.1 479 40.9
AagrBONN_evm.TU.Sc2ySwM_228.3613 Anthoceros agrestis HOM05D004705 ORTHO05D005595 1.2e-84 318.5 662 36.4
Pp3c13_19170 Physcomitrium patens HOM05D004705 ORTHO05D005595 4.6e-84 316.6 478 40.2
Actinidia16007 Actinidia chinensis HOM05D004705 ORTHO05D005595 2.4e-77 294.3 310 51.9
Pp3c23_18290 Physcomitrium patens HOM05D004705 ORTHO05D005595 1.6e-76 291.6 432 38.9
Pp3c20_1400 Physcomitrium patens HOM05D004705 ORTHO05D005595 3.0e-75 287.3 498 36.1
Pp3c20_1403 Physcomitrium patens HOM05D004705 ORTHO05D005595 3.0e-75 287.3 498 36.1
Pp3c8_22450 Physcomitrium patens HOM05D004705 ORTHO05D005595 2.5e-74 284.3 478 37.4
Pp3c24_17130 Physcomitrium patens HOM05D004705 ORTHO05D005595 3.1e-72 277.3 517 36.6
CDE02G1329 Ceratophyllum demersum HOM05D004705 ORTHO05D005595 1.2e-68 265.4 512 35.7
Lj8C335T16 Lonicera japonica HOM05D004705 ORTHO05D005595 4.3e-58 230.3 391 41.4
MBI04_g47892_MAGBIO Magnolia biondii HOM05D004705 ORTHO05D005595 3.4e-55 220.7 303 48.2
SHI09686 Sapria himalayana HOM05D004705 ORTHO05D005595 5.9e-55 219.9 582 35.4
SMO147G0411 Selaginella moellendorffii HOM05D004705 ORTHO05D005595 7.9e-52 209.5 190 52.1
Actinidia08822 Actinidia chinensis HOM05D004705 ORTHO05D005595 1.6e-36 158.7 207 47.3
BcaC09g48527 Brassica carinata HOM05D004705 ORTHO05D005595 3.6e-28 131.0 89 62.9
Medtr1g107505 Medicago truncatula HOM05D004705 ORTHO05D005595 1.8e-24 118.6 71 77.5
Actinidia16006 Actinidia chinensis HOM05D004705 ORTHO05D005595 1.3e-17 95.9 387 30.5
GSVIVG01017207001 Vitis vinifera HOM05D029100 ORTHO05D016439 4.5e-15 87.4 79 50.6
MBI04_g47893_MAGBIO Magnolia biondii HOM05D004705 ORTHO05D005595 9.5e-13 79.7 52 63.5
Medtr1g041460 Medicago truncatula HOM05D004705 ORTHO05D005595 3.6e-12 77.8 49 73.5
FAN08G3635 Fragaria x ananassa HOM05D004705 ORTHO05D000113 9.8e-10 69.7 51 51.0
FAN15G3749 Fragaria x ananassa HOM05D005026 ORTHO05D005981 9.8e-10 69.7 51 51.0
FAN21G1601 Fragaria x ananassa HOM05D000031 ORTHO05D000030 1.7e-09 68.9 50 52.0
FAN07G2703 Fragaria x ananassa HOM05D004705 ORTHO05D005595 4.9e-09 67.4 79 41.8
Cpa.g.c42332 Carica papaya HOM05D004705 ORTHO05D005595 4.1e-08 64.3 50 48.0
Nitab4.5_0000410g0350 Nicotiana tabacum HOM05D004705 ORTHO05D005595 5.4e-08 63.9 406 26.1


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