Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.1F9GAV Arachis hypogaea HOM05D002660 ORTHO05D003902 6.8e-201 703.7 346 100.0
arahy.Tifrunner.gnm1.ann1.RJKU2P Arachis hypogaea HOM05D002660 ORTHO05D003902 1.5e-184 649.4 356 91.6
arahy.Tifrunner.gnm1.ann1.64IP8W Arachis hypogaea HOM05D002660 ORTHO05D003902 4.4e-184 647.9 356 91.3
arahy.Tifrunner.gnm1.ann1.MHP2RT Arachis hypogaea HOM05D002660 ORTHO05D003902 1.2e-178 629.8 356 89.9
arahy.Tifrunner.gnm1.ann1.DD5JWP Arachis hypogaea HOM05D002660 ORTHO05D003902 7.8e-165 583.9 325 91.1
arahy.Tifrunner.gnm1.ann1.4WR8AK Arachis hypogaea HOM05D002660 ORTHO05D003902 2.2e-98 363.2 182 94.0
arahy.Tifrunner.gnm1.ann1.ET7F5Q Arachis hypogaea HOM05D002660 ORTHO05D003902 1.0e-39 168.3 299 40.1
arahy.Tifrunner.gnm1.ann1.HMG3T6 Arachis hypogaea HOM05D002660 ORTHO05D003902 1.5e-35 154.5 269 40.5
RcHm_v2.0_MTg0498601 Rosa chinensis HOM05D002660 ORTHO05D003902 2.6e-35 153.7 152 52.6
Cpa.g.sc263.8 Carica papaya HOM05D002660 ORTHO05D003902 5.3e-28 129.4 170 44.1
SGA_v2.0_scaffold400G50856 Striga asiatica HOM05D002660 ORTHO05D003902 1.5e-27 127.9 144 45.8
Sopen05g012700 Solanum pennellii HOM05D002660 ORTHO05D000001 1.1e-25 121.7 266 33.8
arahy.Tifrunner.gnm1.ann1.8U7R2G Arachis hypogaea HOM05D002660 ORTHO05D003902 1.9e-25 120.9 128 54.7
Solyc00g500181.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.2e-24 118.2 245 36.3
Solyc00g500227.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.2e-24 118.2 245 36.3
Solyc00g500263.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.2e-24 118.2 245 36.3
Solyc00g500350.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 1.2e-24 118.2 245 36.3
Sopen00g006790 Solanum pennellii HOM05D002660 ORTHO05D003902 1.2e-24 118.2 245 36.3
PGSC0003DMG400033607 Solanum tuberosum HOM05D002660 ORTHO05D003902 2.1e-24 117.5 245 36.7
SGA_v2.0_scaffold420G51340 Striga asiatica HOM05D002660 ORTHO05D003902 4.6e-24 116.3 336 30.1
CAN.G248.9 Capsicum annuum HOM05D002660 ORTHO05D003902 3.9e-23 113.2 169 42.6
COL.COLO4_02507 Corchorus olitorius HOM05D002660 ORTHO05D003902 5.1e-23 112.8 227 38.3
CAN.G950.7 Capsicum annuum HOM05D002660 ORTHO05D003902 8.7e-23 112.1 284 32.4
SabraMtG0005500 Salix brachista HOM05D002660 ORTHO05D003902 5.7e-22 109.4 181 40.9
arahy.Tifrunner.gnm1.ann1.BS65NI Arachis hypogaea HOM05D002660 ORTHO05D003902 9.7e-22 108.6 111 55.0
arahy.Tifrunner.gnm1.ann1.P7KX5B Arachis hypogaea HOM05D002660 ORTHO05D003902 9.7e-22 108.6 111 55.0
arahy.Tifrunner.gnm1.ann1.QMNG84 Arachis hypogaea HOM05D002660 ORTHO05D003902 9.7e-22 108.6 111 55.0
arahy.Tifrunner.gnm1.ann1.2HU8EJ Arachis hypogaea HOM05D002660 ORTHO05D009622 1.3e-21 108.2 141 46.1
arahy.Tifrunner.gnm1.ann1.NU84BI Arachis hypogaea HOM05D000388 ORTHO05D000473 1.3e-21 108.2 141 46.1
VMungo0985G0011 Vigna mungo HOM05D008696 ORTHO05D002807 6.3e-21 105.9 228 36.8
BcaC05g26896 Brassica carinata HOM05D002660 ORTHO05D003902 3.4e-19 100.1 128 46.1
BcaC08g43707 Brassica carinata HOM05D002660 ORTHO05D003902 3.4e-19 100.1 128 46.1
BNapus_Darmor_BZH_scaffold_234p00270 Brassica napus HOM05D002660 ORTHO05D003902 3.4e-19 100.1 128 46.1
BolSC28t60340H Brassica oleracea HOM05D002660 ORTHO05D003902 3.4e-19 100.1 128 46.1
BraSC177t45771Z Brassica rapa HOM05D002660 ORTHO05D003902 3.4e-19 100.1 128 46.1
BraSC48t46265Z Brassica rapa HOM05D002660 ORTHO05D003902 3.4e-19 100.1 128 46.1
Sed0026029 Sechium edule HOM05D003467 ORTHO05D004220 3.4e-19 100.1 123 44.7
SGA_v2.0_scaffold255G45438 Striga asiatica HOM05D002660 ORTHO05D003902 7.7e-19 99.0 109 48.6
unitig_87.g28008 Utricularia gibba HOM05D002660 ORTHO05D003902 7.7e-19 99.0 207 37.7
COL.COLO4_04088 Corchorus olitorius HOM05D002660 ORTHO05D003902 1.7e-18 97.8 97 53.6
BcaC05g27131 Brassica carinata HOM05D002660 ORTHO05D003902 2.2e-18 97.4 126 46.8
Solyc11g063530.2 Solanum lycopersicum HOM05D002660 ORTHO05D003902 2.2e-18 97.4 97 53.6
BolC6t36210H Brassica oleracea HOM05D002660 ORTHO05D003902 3.8e-18 96.7 161 37.9
Sed0005295 Sechium edule HOM05D002660 ORTHO05D003902 9.4e-17 92.0 111 49.5
Cfa023009 Carpinus fangiana HOM05D002660 ORTHO05D013121 1.2e-16 91.7 152 39.5
GSVIVG01029663001 Vitis vinifera HOM05D002660 ORTHO05D003902 2.1e-16 90.9 84 56.0
Aa31csc1168G10 Aethionema arabicum HOM05D002660 ORTHO05D003902 2.7e-16 90.5 124 41.9
MBI05_g23322_MAGBIO Magnolia biondii HOM05D003517 ORTHO05D009798 1.8e-15 87.8 112 47.3
ATMG01410 Arabidopsis thaliana HOM05D002660 ORTHO05D003902 3.0e-15 87.0 82 57.3
CAN.G85.19 Capsicum annuum HOM05D002660 ORTHO05D003902 3.9e-15 86.7 103 51.5
Ca_22176_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 4.3e-14 83.2 208 31.2
CsaV3_UNG207980 Cucumis sativus L. HOM05D002660 ORTHO05D003902 2.2e-13 80.9 261 28.4
Lj2P1228T81 Lonicera japonica HOM05D011380 ORTHO05D019448 3.7e-13 80.1 89 44.9
Sed0012925 Sechium edule HOM05D002660 ORTHO05D003902 4.8e-13 79.7 266 28.6
MBI14_g44092_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D003902 8.2e-13 79.0 114 43.0
arahy.Tifrunner.gnm1.ann1.2INJ5A Arachis hypogaea HOM05D002660 ORTHO05D003902 1.1e-12 78.6 273 29.7
arahy.Tifrunner.gnm1.ann1.PGW3V5 Arachis hypogaea HOM05D002660 ORTHO05D003902 6.9e-12 75.9 74 59.5
arahy.Tifrunner.gnm1.ann1.UMNW15 Arachis hypogaea HOM05D002660 ORTHO05D003902 6.9e-12 75.9 74 59.5
ATR0661G179 Amborella trichopoda HOM05D002660 ORTHO05D003902 5.9e-11 72.8 81 48.1
MBI14_g38700_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D002552 7.7e-11 72.4 96 44.8
MBI14_g38260_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D002552 3.8e-10 70.1 95 42.1
Lj5g0008059 Lotus japonicus HOM05D002660 ORTHO05D003902 1.1e-09 68.6 65 52.3
Lj2A1234T113 Lonicera japonica HOM05D002660 ORTHO05D003902 1.4e-09 68.2 101 41.6
SGA_v2.0_scaffold507G52551 Striga asiatica HOM05D002660 ORTHO05D003902 4.2e-09 66.6 72 48.6
SHI34651 Sapria himalayana HOM05D002660 ORTHO05D003902 5.5e-09 66.2 62 58.1
Cpa.g.sc263.18 Carica papaya HOM05D002660 ORTHO05D003902 9.4e-09 65.5 66 53.0
Glyma.08G300900 Glycine max HOM05D002660 ORTHO05D003902 9.4e-09 65.5 65 52.3
ATMG01110 Arabidopsis thaliana HOM05D002660 ORTHO05D003902 1.2e-08 65.1 82 45.1
CARHR283370 Cardamine hirsuta HOM05D002660 ORTHO05D003902 1.6e-08 64.7 82 43.9
SGA_v2.0_scaffold479G52276 Striga asiatica HOM05D002660 ORTHO05D003902 1.6e-08 64.7 63 54.0
SHI41394 Sapria himalayana HOM05D002660 ORTHO05D003902 3.6e-08 63.5 95 36.8
Sopen11g018230 Solanum pennellii HOM05D002660 ORTHO05D003902 7.9e-08 62.4 87 42.5
ATR0575G001 Amborella trichopoda HOM05D002660 ORTHO05D003902 1.0e-07 62.0 48 60.4
CAN.G1167.16 Capsicum annuum HOM05D002660 ORTHO05D003902 1.4e-07 61.6 78 48.7
Nn1g10106 Nelumbo nucifera HOM05D002660 ORTHO05D003902 2.3e-07 60.8 67 49.3
Nn1g10197 Nelumbo nucifera HOM05D002660 ORTHO05D003902 2.3e-07 60.8 67 49.3
MBI05_g05343_MAGBIO Magnolia biondii HOM05D000445 ORTHO05D000314 3.0e-07 60.5 82 43.9
SGA_v2.0_scaffold400G50852 Striga asiatica HOM05D000388 ORTHO05D000473 3.0e-07 60.5 115 37.4
Gorai.001G160300 Gossypium raimondii HOM05D014842 ORTHO05D010514 3.9e-07 60.1 73 42.5
CAN.G1109.11 Capsicum annuum HOM05D002660 ORTHO05D003902 5.1e-07 59.7 78 47.4
Gohir.A06G098102 Gossypium hirsutum HOM05D008696 ORTHO05D010514 5.1e-07 59.7 82 40.2
Lalb_Chr00c24g0406851 Lupinus albus HOM05D002660 ORTHO05D003902 5.1e-07 59.7 51 56.9
PGSC0003DMG400001137 Solanum tuberosum HOM05D002660 ORTHO05D003902 5.1e-07 59.7 78 44.9
Sed0016072 Sechium edule HOM05D002660 ORTHO05D003902 6.7e-07 59.3 52 50.0
arahy.Tifrunner.gnm1.ann1.Z6EYTT Arachis hypogaea HOM05D008696 ORTHO05D010514 8.8e-07 58.9 78 46.2
vmacro00721 Vaccinium macrocarpon HOM05D005420 ORTHO05D006524 1.1e-06 58.5 71 43.7
arahy.Tifrunner.gnm1.ann1.M5G7Z1 Arachis hypogaea HOM05D008696 ORTHO05D010514 2.6e-06 57.4 74 47.3
arahy.Tifrunner.gnm1.ann1.MXAG91 Arachis hypogaea HOM05D008696 ORTHO05D010514 2.6e-06 57.4 74 47.3
CAN.G1.6 Capsicum annuum HOM05D002660 ORTHO05D003902 2.6e-06 57.4 78 46.2
CAN.G72.10 Capsicum annuum HOM05D002660 ORTHO05D003902 2.6e-06 57.4 98 38.8
Lalb_Chr00c29g0407851 Lupinus albus HOM05D043230 ORTHO05D038884 2.6e-06 57.4 71 38.0
Solyc00g142170.2 Solanum lycopersicum HOM05D002660 ORTHO05D003902 2.6e-06 57.4 78 43.6
Solyc00g500255.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 2.6e-06 57.4 78 43.6
Solyc03g063470.1 Solanum lycopersicum HOM05D002660 ORTHO05D003902 2.6e-06 57.4 70 45.7
Lj2P1229T103 Lonicera japonica HOM05D002660 ORTHO05D003902 3.3e-06 57.0 50 56.0
CAN.G505.3 Capsicum annuum HOM05D002660 ORTHO05D003902 4.4e-06 56.6 78 41.0
Lsat_1_v5_gn_5_13340 Lactuca sativa HOM05D002660 ORTHO05D003902 5.7e-06 56.2 47 55.3
Lsat_1_v5_gn_5_172580 Lactuca sativa HOM05D002660 ORTHO05D003902 5.7e-06 56.2 47 55.3
Lsat_1_v5_gn_8_124640 Lactuca sativa HOM05D002660 ORTHO05D003902 5.7e-06 56.2 47 55.3
Lsat_1_v5_gn_8_93860 Lactuca sativa HOM05D002660 ORTHO05D003902 5.7e-06 56.2 47 55.3
Lalb_Chr00c24g0406811 Lupinus albus HOM05D002660 ORTHO05D003902 7.4e-06 55.8 51 56.9


User provided reference genes

Program Settings