Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.1BNP0N Arachis hypogaea HOM05D005845 ORTHO05D007067 1.9e-60 235.7 123 100.0
arahy.Tifrunner.gnm1.ann1.CX8U58 Arachis hypogaea HOM05D005845 ORTHO05D007067 2.0e-54 215.7 123 92.7
arahy.Tifrunner.gnm1.ann1.1Q4DHH Arachis hypogaea HOM05D005845 ORTHO05D007067 3.0e-50 201.8 123 89.4
arahy.Tifrunner.gnm1.ann1.D19TT3 Arachis hypogaea HOM05D005845 ORTHO05D007067 1.1e-49 199.9 123 87.0
Phvul.008G118000 Phaseolus vulgaris HOM05D005845 ORTHO05D007067 1.3e-37 159.8 121 75.2
Psat3g137040 Pisum sativum HOM05D005845 ORTHO05D007067 5.5e-36 154.5 124 70.2
VMungo1383G2075 Vigna mungo HOM05D005845 ORTHO05D007067 5.5e-36 154.5 121 71.9
Medtr7g062970 Medicago truncatula HOM05D005845 ORTHO05D007067 2.7e-35 152.1 120 70.8
Ca_07339_v3 Cicer arietinum L. HOM05D005845 ORTHO05D007067 1.3e-34 149.8 123 68.3
Glyma.07G135300 Glycine max HOM05D005845 ORTHO05D007067 2.3e-34 149.1 119 70.6
Lalb_Chr03g0042411 Lupinus albus HOM05D005845 ORTHO05D007067 1.1e-33 146.7 126 65.1
RcHm_v2.0_Chr3g0466071 Rosa chinensis HOM05D005845 ORTHO05D007067 2.8e-32 142.1 120 63.3
FAN02G1947 Fragaria x ananassa HOM05D005845 ORTHO05D007067 4.8e-32 141.4 120 63.3
FvH4_6g13240 Fragaria vesca HOM05D005845 ORTHO05D007067 8.2e-32 140.6 120 62.5
FAN14G4222 Fragaria x ananassa HOM05D005845 ORTHO05D007067 8.2e-32 140.6 120 62.5
Sed0011119 Sechium edule HOM05D005845 ORTHO05D007067 1.4e-31 139.8 122 62.3
Prupe.6G259200 Prunus persica HOM05D005845 ORTHO05D007067 3.1e-31 138.7 122 63.9
FAN05G4617 Fragaria x ananassa HOM05D005845 ORTHO05D007067 1.2e-30 136.7 120 61.7
ClCG10G021330 Citrullus lanatus HOM05D005845 ORTHO05D007067 2.0e-30 136.0 122 61.5
QL07p030115 Quercus lobata HOM05D005845 ORTHO05D007067 2.6e-30 135.6 120 64.2
QL07p030897 Quercus lobata HOM05D005845 ORTHO05D007067 2.6e-30 135.6 120 64.2
Gorai.009G405900 Gossypium raimondii HOM05D005845 ORTHO05D007067 4.5e-30 134.8 121 64.5
Lj1g0012131 Lotus japonicus HOM05D005845 ORTHO05D007067 7.6e-30 134.0 123 64.2
CsaV3_3G034730 Cucumis sativus L. HOM05D005845 ORTHO05D007067 1.0e-29 133.7 124 62.1
Manes.09G092274 Manihot esculenta HOM05D005845 ORTHO05D007067 1.0e-29 133.7 120 60.0
TWI77G0787 Tripterygium wilfordii HOM05D005845 ORTHO05D007067 1.0e-29 133.7 121 61.2
Haze_20829 Corylus avellana HOM05D005320 ORTHO05D007922 1.3e-29 133.3 122 62.3
Lj3A964T57 Lonicera japonica HOM05D005845 ORTHO05D007067 1.3e-29 133.3 120 61.7
CiPaw.10G147000 Carya illinoinensis HOM05D005845 ORTHO05D007067 1.7e-29 132.9 121 58.7
Hma1.2p1_0936F.1_g238990 Hydrangea macrophylla HOM05D005845 ORTHO05D007067 2.2e-29 132.5 121 62.0
Lalb_Chr01g0022631 Lupinus albus HOM05D005845 ORTHO05D007067 2.2e-29 132.5 127 61.4
Nn2g13425 Nelumbo nucifera HOM05D005845 ORTHO05D007067 2.2e-29 132.5 117 61.5
TWI74G0153 Tripterygium wilfordii HOM05D005845 ORTHO05D007067 2.2e-29 132.5 122 59.8
Gohir.D04G102600 Gossypium hirsutum HOM05D005845 ORTHO05D007067 2.9e-29 132.1 121 63.6
Cpa.g.sc3458.2 Carica papaya HOM05D005845 ORTHO05D007067 6.5e-29 131.0 112 66.1
MD12G1145500 Malus domestica HOM05D005845 ORTHO05D007067 6.5e-29 131.0 121 61.2
Gohir.D07G011900 Gossypium hirsutum HOM05D005845 ORTHO05D007067 1.1e-28 130.2 121 63.6
Gorai.001G012600 Gossypium raimondii HOM05D005845 ORTHO05D007067 1.1e-28 130.2 121 63.6
GSVIVG01034129001 Vitis vinifera HOM05D005845 ORTHO05D007067 1.4e-28 129.8 128 58.6
Gohir.A07G012100 Gossypium hirsutum HOM05D005845 ORTHO05D007067 4.2e-28 128.3 121 62.0
Potri.006G088200 Populus trichocarpa HOM05D005845 ORTHO05D007067 4.2e-28 128.3 121 60.3
PGR004G0892 Punica granatum HOM05D005845 ORTHO05D007067 4.2e-28 128.3 123 58.5
CSS0047206 Camellia sinensis var. sinensis HOM05D005845 ORTHO05D007067 7.1e-28 127.5 117 62.4
Duzib106G0947 Durio zibethinus HOM05D005845 ORTHO05D007067 1.6e-27 126.3 121 58.7
TAR633G1228 Trochodendron aralioides HOM05D005845 ORTHO05D007067 1.6e-27 126.3 120 58.3
Gohir.A04G065200 Gossypium hirsutum HOM05D005845 ORTHO05D007067 2.1e-27 125.9 124 61.3
Nitab4.5_0003394g0030 Nicotiana tabacum HOM05D005845 ORTHO05D007067 2.7e-27 125.6 121 58.7
Ciclev10013078m.g Citrus clementina HOM05D005845 ORTHO05D007067 4.6e-27 124.8 121 57.9
DCAR_028759 Daucus carota HOM05D005845 ORTHO05D007067 4.6e-27 124.8 83 74.7
Nitab4.5_0000705g0030 Nicotiana tabacum HOM05D005845 ORTHO05D007067 4.6e-27 124.8 121 57.9
TAR633G1058 Trochodendron aralioides HOM05D005845 ORTHO05D007067 4.6e-27 124.8 119 58.8
Cc06_g02340 Coffea canephora HOM05D005845 ORTHO05D007067 6.0e-27 124.4 123 58.5
COL.COLO4_14759 Corchorus olitorius HOM05D005845 ORTHO05D007067 6.0e-27 124.4 121 61.2
ECA233G0482 Erigeron canadensis HOM05D005845 ORTHO05D007067 7.9e-27 124.0 91 67.0
HanXRQChr02g0050481 Helianthus annuus HOM05D005845 ORTHO05D007067 1.0e-26 123.6 82 74.4
Peaxi162Scf00527g00733 Petunia axillaris HOM05D005845 ORTHO05D007067 1.0e-26 123.6 121 57.9
vmacro20178 Vaccinium macrocarpon HOM05D005845 ORTHO05D007067 1.0e-26 123.6 104 63.5
Rhsim05G0194900 Rhododendron simsii HOM05D005845 ORTHO05D007067 1.3e-26 123.2 118 59.3
PGSC0003DMG400008901 Solanum tuberosum HOM05D005845 ORTHO05D007067 1.3e-26 123.2 112 59.8
Lsat_1_v5_gn_6_22520 Lactuca sativa HOM05D005845 ORTHO05D007067 1.8e-26 122.9 105 62.9
Sc01g0004490 Simmondsia chinensis HOM05D005845 ORTHO05D007067 1.8e-26 122.9 82 75.6
Atru.chr8.2014 Acer truncatum HOM05D005320 ORTHO05D007922 2.3e-26 122.5 123 59.3
Eucgr.K03092 Eucalyptus grandis HOM05D005845 ORTHO05D007067 3.0e-26 122.1 82 74.4
MD04G1132800 Malus domestica HOM05D005845 ORTHO05D007067 3.0e-26 122.1 121 57.9
Solyc09g011010.3 Solanum lycopersicum HOM05D005845 ORTHO05D007067 3.0e-26 122.1 112 59.8
Migut.L01960 Erythranthe guttata HOM05D005845 ORTHO05D007067 3.9e-26 121.7 122 57.4
Eucgr.K03081 Eucalyptus grandis HOM05D005845 ORTHO05D007067 3.9e-26 121.7 128 58.6
SalBow1G4544 Salvia bowleyana HOM05D005845 ORTHO05D007067 5.1e-26 121.3 81 72.8
SalBow7G2664 Salvia bowleyana HOM05D005845 ORTHO05D007067 5.1e-26 121.3 81 72.8
Thecc.05G035600 Theobroma cacao HOM05D005845 ORTHO05D007067 8.7e-26 120.6 121 57.0
Sopen09g005730 Solanum pennellii HOM05D005845 ORTHO05D007067 1.5e-25 119.8 112 58.9
AUR62018118 Chenopodium quinoa HOM05D005845 ORTHO05D007067 1.3e-24 116.7 113 56.6
AUR62034449 Chenopodium quinoa HOM05D005845 ORTHO05D007067 2.2e-24 115.9 113 55.8
MELO3C009241.2 Cucumis melo HOM05D005845 ORTHO05D007067 2.8e-24 115.5 153 49.0
Os05g0292800 Oryza sativa ssp. japonica HOM05D005845 ORTHO05D007067 2.8e-24 115.5 121 54.5
Aqoxy1G00879 Aquilegia oxysepala HOM05D005845 ORTHO05D007067 3.7e-24 115.2 104 58.7
PSO339G6396 Papaver somniferum HOM05D005845 ORTHO05D007067 4.8e-24 114.8 121 53.7
CAN.G597.2 Capsicum annuum HOM05D005845 ORTHO05D007067 6.3e-24 114.4 112 55.4
Sabra06G0067200 Salix brachista HOM05D000102 ORTHO05D004225 6.3e-24 114.4 118 57.6
MBI05_g35632_MAGBIO Magnolia biondii HOM05D005845 ORTHO05D007067 1.1e-23 113.6 121 54.5
THA.LOC104816255 Tarenaya hassleriana HOM05D005845 ORTHO05D007067 1.4e-23 113.2 120 58.3
SEGI_39626 Sequoiadendron giganteum HOM05D005845 ORTHO05D007067 1.8e-23 112.8 119 52.9
Rhsim04G0158900 Rhododendron simsii HOM05D005845 ORTHO05D007067 3.1e-23 112.1 111 55.0
Eucgr.G01508 Eucalyptus grandis HOM05D005845 ORTHO05D007067 4.1e-23 111.7 146 50.7
Hund14261 Selenicereus undatus HOM05D006267 ORTHO05D007490 4.1e-23 111.7 81 67.9
Carub.0006s0096 Capsella rubella HOM05D005845 ORTHO05D007067 5.3e-23 111.3 119 54.6
BcaC05g29521 Brassica carinata HOM05D005845 ORTHO05D007067 6.9e-23 110.9 120 55.0
BcaC05g29660 Brassica carinata HOM05D005845 ORTHO05D007067 6.9e-23 110.9 123 55.3
C05p58690 Brassica napus HOM05D005845 ORTHO05D007067 6.9e-23 110.9 123 55.3
BolC5t34518H Brassica oleracea HOM05D005845 ORTHO05D007067 6.9e-23 110.9 123 55.3
BraA05t22747Z Brassica rapa HOM05D005845 ORTHO05D007067 6.9e-23 110.9 120 55.8
A05p39650 Brassica napus HOM05D005845 ORTHO05D007067 9.0e-23 110.5 120 55.8
CARHR211240 Cardamine hirsuta HOM05D005845 ORTHO05D007067 1.2e-22 110.2 82 67.1
Sp6g40320 Schrenkiella parvula HOM05D005845 ORTHO05D007067 1.2e-22 110.2 120 54.2
CANSAT35G1952 Cannabis sativa HOM05D005845 ORTHO05D007067 1.5e-22 109.8 126 53.2
ATR0559G337 Amborella trichopoda HOM05D005845 ORTHO05D007067 2.0e-22 109.4 73 74.0
PSO513G0176 Papaver somniferum HOM05D005845 ORTHO05D007067 3.4e-22 108.6 121 52.9
AT5G02120 Arabidopsis thaliana HOM05D005845 ORTHO05D007067 4.5e-22 108.2 87 63.2
Zm00001eb299980 Zea mays HOM05D005845 ORTHO05D007067 4.5e-22 108.2 122 53.3
AL6G11350 Arabidopsis lyrata HOM05D005845 ORTHO05D007067 5.9e-22 107.8 119 55.5
CARHR083690 Cardamine hirsuta HOM05D005845 ORTHO05D007067 5.9e-22 107.8 124 52.4
Thhalv10015070m.g Eutrema salsugineum HOM05D005845 ORTHO05D007067 1.0e-21 107.1 110 56.4
BcaB01g06068 Brassica carinata HOM05D005845 ORTHO05D007067 1.7e-21 106.3 118 52.5
C03p00800 Brassica napus HOM05D005845 ORTHO05D007067 1.7e-21 106.3 118 52.5
BolC3t12643H Brassica oleracea HOM05D005845 ORTHO05D007067 1.7e-21 106.3 118 52.5
Sp3g07700 Schrenkiella parvula HOM05D005845 ORTHO05D007067 1.7e-21 106.3 118 53.4
AL3G20470 Arabidopsis lyrata HOM05D005845 ORTHO05D007067 2.2e-21 105.9 120 52.5
A03p00540 Brassica napus HOM05D005845 ORTHO05D007067 2.9e-21 105.5 119 52.1
BraA03t09444Z Brassica rapa HOM05D005845 ORTHO05D007067 2.9e-21 105.5 119 52.1
EL10Ac2g03022 Beta vulgaris HOM05D005845 ORTHO05D007067 6.5e-21 104.4 123 52.8
Aa31LG3G1810 Aethionema arabicum HOM05D005845 ORTHO05D007067 8.5e-21 104.0 82 64.6
CDE06G2558 Ceratophyllum demersum HOM05D000816 ORTHO05D009154 1.1e-20 103.6 66 77.3
Os12g0480100 Oryza sativa ssp. japonica HOM05D005845 ORTHO05D007067 1.4e-20 103.2 87 57.5
Actinidia11275 Actinidia chinensis HOM05D005845 ORTHO05D007067 4.2e-20 101.7 92 57.6
Carub.0003s0843 Capsella rubella HOM05D005845 ORTHO05D007067 4.2e-20 101.7 123 52.8
Eucgr.K03094 Eucalyptus grandis HOM05D005845 ORTHO05D007067 5.5e-20 101.3 68 72.1
Zm00001eb090340 Zea mays HOM05D005845 ORTHO05D007067 5.5e-20 101.3 66 74.2
BcaB01g06213 Brassica carinata HOM05D005845 ORTHO05D007067 7.2e-20 100.9 123 51.2
Eucgr.K03089 Eucalyptus grandis HOM05D005845 ORTHO05D007067 1.6e-19 99.8 113 54.0
Glyma.18G185300 Glycine max HOM05D005845 ORTHO05D007067 2.1e-19 99.4 118 55.9
Dinv35574 Davidia involucrata HOM05D005845 ORTHO05D007067 3.6e-19 98.6 99 57.6
Pp3c18_21050 Physcomitrium patens HOM05D005845 ORTHO05D007067 3.9e-18 95.1 75 64.0
TAR369G0629 Trochodendron aralioides HOM05D005845 ORTHO05D007067 6.7e-18 94.4 97 56.7
AagrBONN_evm.TU.Sc2ySwM_344.1593 Anthoceros agrestis HOM05D005845 ORTHO05D007067 1.9e-17 92.8 77 58.4
Pp3c22_8010 Physcomitrium patens HOM05D005845 ORTHO05D007067 2.5e-17 92.4 122 47.5
TPR.G22204 Trifolium pratense HOM05D000026 ORTHO05D007067 1.3e-16 90.1 103 53.4
Oeu023072.1 Olea europaea HOM05D005845 ORTHO05D007067 2.2e-16 89.4 61 68.9
Mapoly0151s0005 Marchantia polymorpha HOM05D005845 ORTHO05D007067 1.8e-15 86.3 82 52.4
SEGI_14936 Sequoiadendron giganteum HOM05D005845 ORTHO05D007067 3.1e-15 85.5 95 50.5
Eucgr.G00292 Eucalyptus grandis HOM05D005845 ORTHO05D007067 4.1e-15 85.1 68 66.2
HPP92_019240 Vanilla planifolia HOM05D005845 ORTHO05D007067 1.2e-14 83.6 118 49.2
Zm00001eb372120 Zea mays HOM05D005845 ORTHO05D007067 1.2e-14 83.6 56 71.4
TPR.G34843 Trifolium pratense HOM05D005845 ORTHO05D007067 1.3e-13 80.1 99 46.5
Eucgr.K03086 Eucalyptus grandis HOM05D005845 ORTHO05D007067 1.7e-13 79.7 103 48.5
CBR_g4596 Chara braunii HOM05D005845 ORTHO05D007067 1.9e-12 76.3 80 48.8
Rhsim04G0160800 Rhododendron simsii HOM05D005845 ORTHO05D007067 8.2e-08 60.8 112 37.5


User provided reference genes

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