Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.1BAV2G Arachis hypogaea HOM05D004800 ORTHO05D005842 2.3e-98 362.5 219 100.0
arahy.Tifrunner.gnm1.ann1.D8NHAG Arachis hypogaea HOM05D004800 ORTHO05D005842 6.0e-94 347.8 216 94.0
Glyma.06G061100 Glycine max HOM05D004800 ORTHO05D005842 2.3e-61 239.6 201 72.1
Phvul.009G086600 Phaseolus vulgaris HOM05D004800 ORTHO05D005842 2.3e-61 239.6 201 63.2
VMungo1309G1055 Vigna mungo HOM05D004800 ORTHO05D005842 2.5e-60 236.1 208 62.5
Lj1g0022737 Lotus japonicus HOM05D004800 ORTHO05D005842 7.4e-60 234.6 207 62.3
Medtr3g105925 Medicago truncatula HOM05D004800 ORTHO05D005842 2.2e-56 223.0 213 59.2
Psat5g033480 Pisum sativum HOM05D004800 ORTHO05D005842 2.9e-56 222.6 210 61.0
TPR.G1887 Trifolium pratense HOM05D004800 ORTHO05D005842 1.6e-54 216.9 199 60.3
Ca_15781_v3 Cicer arietinum L. HOM05D004800 ORTHO05D005842 1.8e-53 213.4 211 59.2
Duzib168G1619 Durio zibethinus HOM05D004800 ORTHO05D005842 7.4e-52 208.0 203 55.7
Thecc.09G015200 Theobroma cacao HOM05D004800 ORTHO05D005842 1.4e-50 203.8 202 54.5
Gorai.009G063300 Gossypium raimondii HOM05D004800 ORTHO05D005842 9.1e-50 201.1 204 55.4
COL.COLO4_18955 Corchorus olitorius HOM05D004800 ORTHO05D005842 1.2e-49 200.7 199 53.3
Gohir.A05G060000 Gossypium hirsutum HOM05D004800 ORTHO05D005842 1.2e-49 200.7 203 54.2
Gohir.D05G062200 Gossypium hirsutum HOM05D004800 ORTHO05D005842 5.9e-49 198.4 204 54.4
CiPaw.08G005800 Carya illinoinensis HOM05D004800 ORTHO05D005842 7.7e-49 198.0 140 70.0
Manes.03G008100 Manihot esculenta HOM05D004800 ORTHO05D005842 1.7e-48 196.8 205 52.2
Cpa.g.sc148.17 Carica papaya HOM05D004800 ORTHO05D005842 1.4e-47 193.7 200 52.0
Dinv13413 Davidia involucrata HOM05D004800 ORTHO05D005842 4.2e-47 192.2 200 51.5
Haze_21408 Corylus avellana HOM05D004800 ORTHO05D005842 7.2e-47 191.4 140 65.7
CANSAT25G3039 Cannabis sativa HOM05D004800 ORTHO05D005842 1.2e-46 190.7 201 50.7
Manes.16G130200 Manihot esculenta HOM05D004800 ORTHO05D005842 3.6e-46 189.1 201 49.8
Cfa013047 Carpinus fangiana HOM05D004800 ORTHO05D005842 6.1e-46 188.3 200 51.5
RcHm_v2.0_Chr6g0299361 Rosa chinensis HOM05D004800 ORTHO05D005842 6.1e-46 188.3 210 47.6
TWI32G1317 Tripterygium wilfordii HOM05D004800 ORTHO05D005842 7.9e-46 188.0 195 50.8
Hma1.2p1_0389F.1_g142470 Hydrangea macrophylla HOM05D004800 ORTHO05D005842 1.0e-45 187.6 203 49.8
Ciclev10009140m.g Citrus clementina HOM05D004800 ORTHO05D005842 1.4e-45 187.2 200 49.5
CSS0020729 Camellia sinensis var. sinensis HOM05D004800 ORTHO05D005842 1.8e-45 186.8 197 52.8
CSS0041988 Camellia sinensis var. sinensis HOM05D004800 ORTHO05D005842 1.8e-45 186.8 197 52.8
QL02p018802 Quercus lobata HOM05D004800 ORTHO05D005842 1.8e-45 186.8 140 63.6
Sed0002840 Sechium edule HOM05D004800 ORTHO05D005842 1.8e-45 186.8 200 50.0
Dinv08182 Davidia involucrata HOM05D004800 ORTHO05D005842 2.3e-45 186.4 200 50.0
FAN27G0477 Fragaria x ananassa HOM05D004800 ORTHO05D005842 3.9e-45 185.7 205 48.8
FvH4_2g41170 Fragaria vesca HOM05D004800 ORTHO05D005842 5.1e-45 185.3 205 48.8
Lalb_Chr11g0063501 Lupinus albus HOM05D004800 ORTHO05D005842 5.1e-45 185.3 163 60.7
AUR62032420 Chenopodium quinoa HOM05D004800 ORTHO05D005842 6.7e-45 184.9 144 62.5
TAR625G0162 Trochodendron aralioides HOM05D004800 ORTHO05D005842 1.1e-44 184.1 210 45.7
FAN20G2958 Fragaria x ananassa HOM05D004800 ORTHO05D005842 1.5e-44 183.7 205 48.3
Eucgr.C02606 Eucalyptus grandis HOM05D004800 ORTHO05D005842 4.4e-44 182.2 196 50.0
AUR62024801 Chenopodium quinoa HOM05D004800 ORTHO05D005842 7.4e-44 181.4 144 61.1
Lsat_1_v5_gn_5_49760 Lactuca sativa HOM05D004800 ORTHO05D005842 9.7e-44 181.0 195 50.3
Eucgr.L02918 Eucalyptus grandis HOM05D004800 ORTHO05D005842 1.3e-43 180.6 196 49.5
HanXRQChr13g0411011 Helianthus annuus HOM05D004800 ORTHO05D005842 2.2e-43 179.9 197 50.3
Prupe.1G394400 Prunus persica HOM05D004800 ORTHO05D005842 2.2e-43 179.9 201 48.3
Potri.006G264700 Populus trichocarpa HOM05D004800 ORTHO05D005842 2.8e-43 179.5 207 47.3
Rhsim07G0165700 Rhododendron simsii HOM05D004800 ORTHO05D005842 2.8e-43 179.5 193 49.2
TAR625G0311 Trochodendron aralioides HOM05D004800 ORTHO05D005842 3.7e-43 179.1 210 44.8
ECA240G1139 Erigeron canadensis HOM05D004800 ORTHO05D005842 1.4e-42 177.2 141 59.6
Lj7A735T34 Lonicera japonica HOM05D004800 ORTHO05D005842 1.8e-42 176.8 199 49.7
PSO384G2235 Papaver somniferum HOM05D004800 ORTHO05D005842 2.4e-42 176.4 197 46.2
DCAR_022862 Daucus carota HOM05D004800 ORTHO05D005842 3.1e-42 176.0 205 48.3
MD08G1055900 Malus domestica HOM05D004800 ORTHO05D005842 3.1e-42 176.0 140 60.0
PSO339G1021 Papaver somniferum HOM05D004800 ORTHO05D005842 3.1e-42 176.0 196 46.4
PGR044G1902 Punica granatum HOM05D004800 ORTHO05D005842 4.1e-42 175.6 199 50.8
CsaV3_4G036490 Cucumis sativus L. HOM05D004800 ORTHO05D005842 5.3e-42 175.3 137 63.5
Sc09g0010680 Simmondsia chinensis HOM05D004800 ORTHO05D005842 6.9e-42 174.9 195 47.7
Atru.chr7.2559 Acer truncatum HOM05D004800 ORTHO05D005842 9.1e-42 174.5 140 60.0
ClCG05G016220 Citrullus lanatus HOM05D004800 ORTHO05D005842 9.1e-42 174.5 137 63.5
TWI34G0615 Tripterygium wilfordii HOM05D004800 ORTHO05D005842 9.1e-42 174.5 200 48.0
EL10Ac2g02494 Beta vulgaris HOM05D004800 ORTHO05D005842 1.2e-41 174.1 148 60.1
Sabra06G0206800 Salix brachista HOM05D004800 ORTHO05D005842 1.2e-41 174.1 203 46.8
Aqoxy7G03382 Aquilegia oxysepala HOM05D004800 ORTHO05D005842 2.6e-41 172.9 199 47.7
MELO3C016954.2 Cucumis melo HOM05D004800 ORTHO05D005842 7.7e-41 171.4 137 61.3
THA.LOC104814986 Tarenaya hassleriana HOM05D004800 ORTHO05D005842 7.7e-41 171.4 203 45.8
vmacro05151 Vaccinium macrocarpon HOM05D004800 ORTHO05D005842 1.0e-40 171.0 185 49.2
GSVIVG01035974001 Vitis vinifera HOM05D004800 ORTHO05D005842 1.0e-40 171.0 178 51.1
CSS0021373 Camellia sinensis var. sinensis HOM05D004800 ORTHO05D005842 1.3e-40 170.6 182 51.6
Hund02986 Selenicereus undatus HOM05D004800 ORTHO05D005842 1.7e-40 170.2 194 46.4
AL6G36710 Arabidopsis lyrata HOM05D004800 ORTHO05D005842 2.2e-40 169.9 201 45.8
Sabra18G0021000 Salix brachista HOM05D004800 ORTHO05D005842 5.0e-40 168.7 209 46.4
Aa31LG11G4300 Aethionema arabicum HOM05D004800 ORTHO05D005842 2.5e-39 166.4 198 51.5
Thhalv10004902m.g Eutrema salsugineum HOM05D004800 ORTHO05D005842 9.4e-39 164.5 204 51.0
MSTRG.25830 Avicennia marina HOM05D004800 ORTHO05D005842 1.6e-38 163.7 208 42.8
BcaC04g23570 Brassica carinata HOM05D004800 ORTHO05D005842 2.1e-38 163.3 194 44.8
C09p07000 Brassica napus HOM05D004800 ORTHO05D005842 2.1e-38 163.3 194 44.8
CANSAT35G0701 Cannabis sativa HOM05D004800 ORTHO05D005842 2.7e-38 162.9 205 42.9
Sp2g22450 Schrenkiella parvula HOM05D004800 ORTHO05D005842 3.6e-38 162.5 204 43.6
BcaNung03198 Brassica carinata HOM05D004800 ORTHO05D005842 4.7e-38 162.2 206 42.7
Oeu001621.3 Olea europaea HOM05D004800 ORTHO05D005842 1.0e-37 161.0 208 40.4
A06p35840 Brassica napus HOM05D004800 ORTHO05D005842 1.4e-37 160.6 192 43.8
BraA06t26509Z Brassica rapa HOM05D004800 ORTHO05D005842 1.4e-37 160.6 192 43.8
BraA09t36276Z Brassica rapa HOM05D004800 ORTHO05D005842 1.4e-37 160.6 203 44.8
ATR0580G220 Amborella trichopoda HOM05D004800 ORTHO05D005842 1.8e-37 160.2 201 45.3
BcaNung02298 Brassica carinata HOM05D004800 ORTHO05D005842 3.0e-37 159.5 197 42.6
Nn2g12411 Nelumbo nucifera HOM05D004800 ORTHO05D005842 3.0e-37 159.5 130 58.5
Cc08_g07200 Coffea canephora HOM05D004800 ORTHO05D005842 3.9e-37 159.1 195 45.6
AT5G25080 Arabidopsis thaliana HOM05D004800 ORTHO05D005842 5.2e-37 158.7 197 44.2
BolC9t53616H Brassica oleracea HOM05D004800 ORTHO05D005842 6.7e-37 158.3 143 52.4
Carub.0006s2291 Capsella rubella HOM05D004800 ORTHO05D005842 6.7e-37 158.3 201 43.3
A09p06310 Brassica napus HOM05D004800 ORTHO05D005842 1.5e-36 157.1 203 43.8
CDE02G3876 Ceratophyllum demersum HOM05D004800 ORTHO05D005842 1.5e-36 157.1 198 43.9
SGA_v2.0_scaffold147G36341 Striga asiatica HOM05D004800 ORTHO05D005842 2.0e-36 156.8 205 41.0
Oeu009650.1 Olea europaea HOM05D004800 ORTHO05D005842 5.7e-36 155.2 208 39.4
CARHR188420 Cardamine hirsuta HOM05D004800 ORTHO05D005842 7.4e-36 154.8 197 43.1
SalBow4G3208 Salvia bowleyana HOM05D004800 ORTHO05D005842 7.4e-36 154.8 203 43.3
Peaxi162Scf00006g00249 Petunia axillaris HOM05D004800 ORTHO05D005842 9.7e-36 154.5 206 43.7
HPP92_017174 Vanilla planifolia HOM05D004800 ORTHO05D005842 4.8e-35 152.1 198 41.4
Actinidia23108 Actinidia chinensis HOM05D004800 ORTHO05D005842 2.4e-34 149.8 201 45.8
Nitab4.5_0010613g0010 Nicotiana tabacum HOM05D004800 ORTHO05D005842 5.3e-34 148.7 219 39.7
Actinidia14132 Actinidia chinensis HOM05D004800 ORTHO05D005842 7.0e-34 148.3 197 45.2
Migut.A00358 Erythranthe guttata HOM05D004800 ORTHO05D005842 7.0e-34 148.3 210 40.0
BcaNung06718 Brassica carinata HOM05D004800 ORTHO05D005842 9.1e-34 147.9 187 43.3
CAN.G333.3 Capsicum annuum HOM05D004800 ORTHO05D005842 2.0e-33 146.7 203 40.9
BolC7t44804H Brassica oleracea HOM05D004800 ORTHO05D005842 2.6e-33 146.4 220 38.2
Os08g0270200 Oryza sativa ssp. japonica HOM05D004800 ORTHO05D005842 3.5e-33 146.0 206 38.8
C07p42740 Brassica napus HOM05D004800 ORTHO05D005842 4.5e-33 145.6 220 37.7
Solyc07g008750.4 Solanum lycopersicum HOM05D004800 ORTHO05D005842 2.9e-32 142.9 204 39.2
unitig_749.g13819 Utricularia gibba HOM05D004800 ORTHO05D005842 2.9e-32 142.9 205 40.0
Zm00001eb177850 Zea mays HOM05D004800 ORTHO05D005842 2.9e-32 142.9 201 40.8
Sopen07g004690 Solanum pennellii HOM05D004800 ORTHO05D005842 1.1e-31 141.0 195 39.5
PGSC0003DMG401028727 Solanum tuberosum HOM05D004800 ORTHO05D005842 7.2e-31 138.3 203 38.4
arahy.Tifrunner.gnm1.ann1.D9UBCD Arachis hypogaea HOM05D004800 ORTHO05D005842 2.8e-27 126.3 204 39.2
arahy.Tifrunner.gnm1.ann1.CUZL6Q Arachis hypogaea HOM05D004800 ORTHO05D005842 4.1e-26 122.5 204 38.2
arahy.Tifrunner.gnm1.ann1.N4WP0Z Arachis hypogaea HOM05D004800 ORTHO05D005842 4.1e-26 122.5 204 38.2
SHI21074 Sapria himalayana HOM05D004800 ORTHO05D005842 5.3e-26 122.1 214 38.3
arahy.Tifrunner.gnm1.ann1.YE5PM3 Arachis hypogaea HOM05D004800 ORTHO05D005842 7.0e-26 121.7 204 38.2
MBI14_g09103_MAGBIO Magnolia biondii HOM05D004800 ORTHO05D005842 5.9e-25 118.6 205 35.6
BcaB04g19808 Brassica carinata HOM05D004800 ORTHO05D005842 1.7e-24 117.1 159 44.0
Lj5g0013304 Lotus japonicus HOM05D004800 ORTHO05D005842 3.2e-23 112.8 149 44.3
Nitab4.5_0000617g0080 Nicotiana tabacum HOM05D004800 ORTHO05D005842 4.2e-23 112.5 85 61.2
Glyma.14G101700 Glycine max HOM05D004800 ORTHO05D005842 8.0e-22 108.2 205 35.6
Phvul.001G041300 Phaseolus vulgaris HOM05D004800 ORTHO05D005842 1.4e-21 107.5 208 35.6
Mapoly0130s0032 Marchantia polymorpha HOM05D004800 ORTHO05D005842 1.2e-20 104.4 141 34.8
VMungo0647G1387 Vigna mungo HOM05D004800 ORTHO05D005842 3.4e-20 102.8 119 47.1
Pp3c2_14120 Physcomitrium patens HOM05D004800 ORTHO05D005842 7.5e-20 101.7 143 37.8
Psat6g026000 Pisum sativum HOM05D004800 ORTHO05D005842 3.7e-19 99.4 126 45.2
AagrBONN_evm.TU.Sc2ySwM_368.3173 Anthoceros agrestis HOM05D004800 ORTHO05D005842 4.8e-19 99.0 139 38.8
SMO140G0030 Selaginella moellendorffii HOM05D004800 ORTHO05D005842 1.1e-18 97.8 139 38.1
unitig_26.g9784 Utricularia gibba HOM05D004800 ORTHO05D005842 7.0e-18 95.1 169 36.7
Potri.018G018100 Populus trichocarpa HOM05D004800 ORTHO05D005842 7.7e-17 91.7 120 45.0
Peaxi162Scf01038g00137 Petunia axillaris HOM05D004800 ORTHO05D005842 1.0e-16 91.3 118 44.1
TPR.G38911 Trifolium pratense HOM05D004800 ORTHO05D005842 1.0e-16 91.3 109 44.0
Medtr1g014130 Medicago truncatula HOM05D004800 ORTHO05D005842 3.8e-16 89.4 104 46.2
Lalb_Chr24g0401961 Lupinus albus HOM05D004800 ORTHO05D005842 5.2e-13 79.0 109 40.4
TPR.G28957 Trifolium pratense HOM05D000201 ORTHO05D000421 2.4e-10 70.1 48 66.7
CBR_g8579 Chara braunii HOM05D004800 ORTHO05D005842 9.2e-10 68.2 140 31.4
SEGI_18119 Sequoiadendron giganteum HOM05D004800 ORTHO05D005842 2.7e-09 66.6 99 33.3
TPR.G31499 Trifolium pratense HOM05D000201 ORTHO05D016113 1.5e-07 60.8 48 62.5
Zm00001eb353150 Zea mays HOM05D004800 ORTHO05D005842 2.8e-06 56.6 120 34.2


User provided reference genes

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