Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.14V2F6 Arachis hypogaea HOM05D008514 ORTHO05D010490 1.1e-56 223.0 111 100.0
arahy.Tifrunner.gnm1.ann1.UQY7KW Arachis hypogaea HOM05D008514 ORTHO05D010490 2.4e-51 205.3 142 77.5
Phvul.005G120600 Phaseolus vulgaris HOM05D008514 ORTHO05D010490 3.3e-24 115.2 111 60.4
Lalb_Chr24g0393401 Lupinus albus HOM05D008514 ORTHO05D010490 7.4e-24 114.0 111 61.3
Glyma.12G187800 Glycine max HOM05D008514 ORTHO05D010490 9.6e-24 113.6 112 59.8
Glyma.13G313400 Glycine max HOM05D008514 ORTHO05D010490 2.4e-22 109.0 113 60.2
VMungo1080G0611 Vigna mungo HOM05D008514 ORTHO05D010490 7.6e-21 104.0 111 55.9
Lj3g0020405 Lotus japonicus HOM05D008514 ORTHO05D010490 3.2e-19 98.6 114 57.9
Haze_23309 Corylus avellana HOM05D008514 ORTHO05D010490 1.6e-18 96.3 111 50.5
Psat5g260000 Pisum sativum HOM05D008514 ORTHO05D010490 6.0e-18 94.4 112 53.6
TPR.G4224 Trifolium pratense HOM05D008514 ORTHO05D010490 1.8e-17 92.8 112 53.6
Psat5g259960 Pisum sativum HOM05D008514 ORTHO05D010490 1.3e-15 86.7 112 49.1
VMungo0507G0001 Vigna mungo HOM05D008514 ORTHO05D010490 2.4e-14 82.4 110 48.2
CiPaw.13G130800 Carya illinoinensis HOM05D008514 ORTHO05D010490 2.6e-13 79.0 107 47.7
Cfa009942 Carpinus fangiana HOM05D008514 ORTHO05D010490 5.9e-13 77.8 126 40.5
CiPaw.14G094900 Carya illinoinensis HOM05D008514 ORTHO05D010490 7.6e-13 77.4 113 47.8
Dinv17092 Davidia involucrata HOM05D002527 ORTHO05D002865 2.2e-12 75.9 109 47.7
Actinidia35477 Actinidia chinensis HOM05D008514 ORTHO05D010490 2.9e-12 75.5 105 44.8
Actinidia37064 Actinidia chinensis HOM05D008514 ORTHO05D010490 5.5e-11 71.2 104 49.0
Duzib170G0491 Durio zibethinus HOM05D008514 ORTHO05D010490 1.6e-10 69.7 103 40.8
Thecc.09G274000 Theobroma cacao HOM05D008514 ORTHO05D010490 1.8e-09 66.2 95 46.3
QL01p011158 Quercus lobata HOM05D008514 ORTHO05D010490 6.7e-09 64.3 110 40.0
Medtr2g087180 Medicago truncatula HOM05D008514 ORTHO05D010490 9.7e-08 60.5 99 43.4
TAR623G0293 Trochodendron aralioides HOM05D008514 ORTHO05D010490 9.7e-08 60.5 111 36.9
Sabra09G0012000 Salix brachista HOM05D008514 ORTHO05D010490 2.2e-07 59.3 111 39.6
Potri.009G020300 Populus trichocarpa HOM05D008514 ORTHO05D010490 3.7e-07 58.5 111 39.6
Nn6g34697 Nelumbo nucifera HOM05D008514 ORTHO05D010490 8.2e-07 57.4 81 45.7
Prupe.6G143500 Prunus persica HOM05D008514 ORTHO05D010490 8.2e-07 57.4 105 39.0
COL.COLO4_10193 Corchorus olitorius HOM05D008514 ORTHO05D010490 1.1e-06 57.0 100 38.0
QL01p020143 Quercus lobata HOM05D008514 ORTHO05D010490 1.1e-06 57.0 76 44.7
TPR.G33036 Trifolium pratense HOM05D008514 ORTHO05D413081 2.4e-06 55.8 102 40.2
Medtr4g051618 Medicago truncatula HOM05D008514 ORTHO05D010490 5.3e-06 54.7 112 38.4
Potri.001G217500 Populus trichocarpa HOM05D008514 ORTHO05D010490 5.3e-06 54.7 106 39.6


User provided reference genes

Program Settings