Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.13N2B5 Arachis hypogaea HOM05D002214 ORTHO05D005113 1.4e-57 226.5 147 100.0
PGR031G1630 Punica granatum HOM05D002214 ORTHO05D005113 2.7e-29 132.5 77 87.0
Ca_27724_v3 Cicer arietinum L. HOM05D002214 ORTHO05D005113 5.9e-29 131.3 77 87.0
Ciclev10032739m.g Citrus clementina HOM05D002214 ORTHO05D005113 1.0e-28 130.6 77 85.7
Lalb_Chr04g0263831 Lupinus albus HOM05D002214 ORTHO05D005113 1.0e-28 130.6 77 85.7
Lsat_1_v5_gn_6_74341 Lactuca sativa HOM05D002214 ORTHO05D005113 2.2e-28 129.4 77 85.7
THA.LOC104809846 Tarenaya hassleriana HOM05D002214 ORTHO05D005113 3.8e-28 128.6 77 85.7
CANSAT80G0460 Cannabis sativa HOM05D002214 ORTHO05D005113 5.0e-28 128.3 76 85.5
Lj3g0001707 Lotus japonicus HOM05D002214 ORTHO05D005113 5.0e-28 128.3 76 86.8
VMungo1080G0077 Vigna mungo HOM05D002214 ORTHO05D005113 5.0e-28 128.3 76 86.8
arahy.Tifrunner.gnm1.ann1.M3J26F Arachis hypogaea HOM05D002214 ORTHO05D005113 6.5e-28 127.9 100 70.0
Eucgr.J01208 Eucalyptus grandis HOM05D002214 ORTHO05D005113 8.5e-28 127.5 75 86.7
FvH4_7g01790 Fragaria vesca HOM05D002214 ORTHO05D005113 8.5e-28 127.5 77 83.1
FAN03G0770 Fragaria x ananassa HOM05D002214 ORTHO05D005113 8.5e-28 127.5 77 83.1
FAN10G3956 Fragaria x ananassa HOM05D002214 ORTHO05D005113 8.5e-28 127.5 77 83.1
Sabra16G0160600 Salix brachista HOM05D002214 ORTHO05D005113 8.5e-28 127.5 75 86.7
Cpa.g.sc125.49 Carica papaya HOM05D002214 ORTHO05D005113 1.5e-27 126.7 77 84.4
Psat5g212520 Pisum sativum HOM05D002214 ORTHO05D005113 1.5e-27 126.7 77 84.4
QL04p010049 Quercus lobata HOM05D002214 ORTHO05D005113 1.5e-27 126.7 75 86.7
unitig_37.g12366 Utricularia gibba HOM05D002214 ORTHO05D005113 1.5e-27 126.7 76 85.5
Nn7g36334 Nelumbo nucifera HOM05D002214 ORTHO05D007367 2.5e-27 125.9 108 83.3
TPR.G14549 Trifolium pratense HOM05D002214 ORTHO05D005113 2.5e-27 125.9 75 85.3
FAN01G2033 Fragaria x ananassa HOM05D002214 ORTHO05D005113 3.2e-27 125.6 77 81.8
Potri.009G056600 Populus trichocarpa HOM05D002214 ORTHO05D005113 3.2e-27 125.6 75 85.3
Rhsim01G0125000 Rhododendron simsii HOM05D002214 ORTHO05D005113 3.2e-27 125.6 77 83.1
Sp6g30240 Schrenkiella parvula HOM05D002214 ORTHO05D005113 3.2e-27 125.6 77 83.1
Cc02_g28810 Coffea canephora HOM05D002214 ORTHO05D005113 4.2e-27 125.2 77 85.7
Prupe.2G024200 Prunus persica HOM05D002214 ORTHO05D005113 4.2e-27 125.2 75 84.0
RcHm_v2.0_Chr1g0318401 Rosa chinensis HOM05D002214 ORTHO05D005113 4.2e-27 125.2 75 84.0
ClCG09G004420 Citrullus lanatus HOM05D002214 ORTHO05D005113 5.5e-27 124.8 75 85.3
COL.COLO4_12334 Corchorus olitorius HOM05D000031 ORTHO05D000030 5.5e-27 124.8 75 85.3
MELO3C023584.2 Cucumis melo HOM05D002214 ORTHO05D005113 5.5e-27 124.8 75 85.3
CsaV3_7G030720 Cucumis sativus L. HOM05D002214 ORTHO05D005113 5.5e-27 124.8 75 85.3
MD07G1023300 Malus domestica HOM05D002214 ORTHO05D005113 5.5e-27 124.8 77 81.8
Manes.07G010700 Manihot esculenta HOM05D002214 ORTHO05D005113 5.5e-27 124.8 75 85.3
Manes.10G136000 Manihot esculenta HOM05D002214 ORTHO05D005113 5.5e-27 124.8 75 85.3
Nn2g15193 Nelumbo nucifera HOM05D002214 ORTHO05D005113 5.5e-27 124.8 75 85.3
Thecc.01G406300 Theobroma cacao HOM05D002214 ORTHO05D005113 5.5e-27 124.8 75 85.3
arahy.Tifrunner.gnm1.ann1.F9QUKJ Arachis hypogaea HOM05D002214 ORTHO05D005113 7.2e-27 124.4 91 95.6
arahy.Tifrunner.gnm1.ann1.Y5766G Arachis hypogaea HOM05D002214 ORTHO05D009715 7.2e-27 124.4 91 95.6
HanXRQChr03g0082771 Helianthus annuus HOM05D002214 ORTHO05D005113 7.2e-27 124.4 75 85.3
Sabra09G0041400 Salix brachista HOM05D002214 ORTHO05D005113 7.2e-27 124.4 75 84.0
Glyma.04G142300 Glycine max HOM05D002214 ORTHO05D005113 9.4e-27 124.0 73 87.7
Glyma.11G159648 Glycine max HOM05D002214 ORTHO05D005113 9.4e-27 124.0 73 87.7
Lj9A641T66 Lonicera japonica HOM05D002214 ORTHO05D005113 9.4e-27 124.0 73 87.7
THA.LOC104819106 Tarenaya hassleriana HOM05D002214 ORTHO05D005113 9.4e-27 124.0 75 85.3
GSVIVG01032214001 Vitis vinifera HOM05D002214 ORTHO05D005113 9.4e-27 124.0 73 87.7
Atru.chr11.2514 Acer truncatum HOM05D002214 ORTHO05D005113 1.2e-26 123.6 75 84.0
CSS0031731 Camellia sinensis var. sinensis HOM05D002214 ORTHO05D005113 1.2e-26 123.6 75 85.3
Medtr3g034200 Medicago truncatula HOM05D002214 ORTHO05D005113 1.2e-26 123.6 75 84.0
CiPaw.13G008000 Carya illinoinensis HOM05D002214 ORTHO05D005113 1.6e-26 123.2 75 84.0
Dinv07431 Davidia involucrata HOM05D002214 ORTHO05D005113 1.6e-26 123.2 76 84.2
Duzib133G1108 Durio zibethinus HOM05D002214 ORTHO05D005113 1.6e-26 123.2 75 84.0
PSO339G1526 Papaver somniferum HOM05D002214 ORTHO05D005113 1.6e-26 123.2 75 84.0
PSO384G1143 Papaver somniferum HOM05D002214 ORTHO05D005113 1.6e-26 123.2 75 84.0
TWI53G0951 Tripterygium wilfordii HOM05D002214 ORTHO05D005113 2.1e-26 122.9 75 85.3
TWI53G1910 Tripterygium wilfordii HOM05D002214 ORTHO05D005113 2.1e-26 122.9 75 85.3
VMungo1127G0768 Vigna mungo HOM05D002214 ORTHO05D005113 2.1e-26 122.9 73 86.3
Cfa010811 Carpinus fangiana HOM05D002214 ORTHO05D005113 2.7e-26 122.5 72 87.5
Haze_03145 Corylus avellana HOM05D002214 ORTHO05D005113 2.7e-26 122.5 72 87.5
Haze_03148 Corylus avellana HOM05D002214 ORTHO05D005113 2.7e-26 122.5 72 87.5
DCAR_003226 Daucus carota HOM05D002214 ORTHO05D005113 2.7e-26 122.5 77 81.8
Hma1.2p1_2740F.1_g327740 Hydrangea macrophylla HOM05D002214 ORTHO05D005113 2.7e-26 122.5 73 86.3
MD02G1300400 Malus domestica HOM05D002214 ORTHO05D005113 2.7e-26 122.5 75 82.7
Phvul.011G183200 Phaseolus vulgaris HOM05D002214 ORTHO05D005113 2.7e-26 122.5 73 86.3
Potri.001G261800 Populus trichocarpa HOM05D002214 ORTHO05D005113 2.7e-26 122.5 75 84.0
Sed0009169 Sechium edule HOM05D002214 ORTHO05D005113 2.7e-26 122.5 75 84.0
HanXRQChr08g0226841 Helianthus annuus HOM05D002214 ORTHO05D005113 3.6e-26 122.1 72 87.5
SGA_v2.0_scaffold119G32765 Striga asiatica HOM05D002214 ORTHO05D005113 3.6e-26 122.1 77 81.8
BcaC04g19081 Brassica carinata HOM05D002214 ORTHO05D005113 4.7e-26 121.7 77 80.5
BolC9t59169H Brassica oleracea HOM05D002214 ORTHO05D005113 4.7e-26 121.7 77 80.5
Phvul.005G035200 Phaseolus vulgaris HOM05D002214 ORTHO05D005113 4.7e-26 121.7 73 84.9
Aa31sc919G10 Aethionema arabicum HOM05D002214 ORTHO05D005113 6.1e-26 121.3 75 82.7
arahy.Tifrunner.gnm1.ann1.0NW2H0 Arachis hypogaea HOM05D002214 ORTHO05D005113 6.1e-26 121.3 113 61.1
SalBow6G0878 Salvia bowleyana HOM05D002214 ORTHO05D005113 6.1e-26 121.3 73 84.9
Thhalv10014756m.g Eutrema salsugineum HOM05D002214 ORTHO05D005113 8.0e-26 120.9 75 82.7
Gohir.A11G135400 Gossypium hirsutum HOM05D002214 ORTHO05D005113 8.0e-26 120.9 75 82.7
TAR623G1010 Trochodendron aralioides HOM05D002214 ORTHO05D005113 8.0e-26 120.9 77 81.8
CAN.G909.3 Capsicum annuum HOM05D002214 ORTHO05D005113 1.0e-25 120.6 73 84.9
CiPaw.14G003300 Carya illinoinensis HOM05D002214 ORTHO05D005113 1.0e-25 120.6 75 84.0
MBI19_g12816_MAGBIO Magnolia biondii HOM05D002214 ORTHO05D005113 1.0e-25 120.6 73 83.6
Sed0022614 Sechium edule HOM05D002214 ORTHO05D005113 1.0e-25 120.6 75 81.3
Sc11g0009030 Simmondsia chinensis HOM05D002214 ORTHO05D005113 1.0e-25 120.6 77 80.5
Solyc01g087900.3 Solanum lycopersicum HOM05D002214 ORTHO05D005113 1.0e-25 120.6 73 84.9
Sopen01g034830 Solanum pennellii HOM05D002214 ORTHO05D005113 1.0e-25 120.6 73 84.9
PGSC0003DMG400006777 Solanum tuberosum HOM05D002214 ORTHO05D005113 1.0e-25 120.6 73 84.9
Dinv43403 Davidia involucrata HOM05D002214 ORTHO05D005113 1.4e-25 120.2 71 87.3
Nitab4.5_0001244g0050 Nicotiana tabacum HOM05D002214 ORTHO05D005113 1.8e-25 119.8 73 83.6
ECA233G5526 Erigeron canadensis HOM05D002214 ORTHO05D005113 2.3e-25 119.4 72 86.1
MD02G1300500 Malus domestica HOM05D002214 ORTHO05D005113 2.3e-25 119.4 75 81.3
MSTRG.17006 Avicennia marina HOM05D002214 ORTHO05D005113 4.0e-25 118.6 73 83.6
Duzib138G1825 Durio zibethinus HOM05D002214 ORTHO05D005113 4.0e-25 118.6 75 81.3
Ah.10g038600 Amaranthus hybridus HOM05D002214 ORTHO05D005113 5.2e-25 118.2 75 81.3
AL6G24400 Arabidopsis lyrata HOM05D002214 ORTHO05D005113 5.2e-25 118.2 75 81.3
AT5G13780 Arabidopsis thaliana HOM05D002214 ORTHO05D005113 5.2e-25 118.2 75 81.3
BcaC04g24254 Brassica carinata HOM05D002214 ORTHO05D005113 5.2e-25 118.2 77 77.9
Carub.0006s1196 Capsella rubella HOM05D002214 ORTHO05D005113 5.2e-25 118.2 75 81.3
vmacro17359 Vaccinium macrocarpon HOM05D002214 ORTHO05D005113 5.2e-25 118.2 97 66.0
Gohir.D11G141700 Gossypium hirsutum HOM05D002214 ORTHO05D005113 6.8e-25 117.9 75 81.3
Gorai.007G152100 Gossypium raimondii HOM05D002214 ORTHO05D005113 6.8e-25 117.9 75 81.3
Nitab4.5_0000087g0120 Nicotiana tabacum HOM05D002214 ORTHO05D005113 6.8e-25 117.9 73 83.6
Nitab4.5_0001676g0100 Nicotiana tabacum HOM05D002214 ORTHO05D005113 6.8e-25 117.9 73 83.6
Lsat_1_v5_gn_6_17421 Lactuca sativa HOM05D002214 ORTHO05D005113 8.8e-25 117.5 72 83.3
Nitab4.5_0008942g0030 Nicotiana tabacum HOM05D002214 ORTHO05D005113 8.8e-25 117.5 73 82.2
TAR633G1565 Trochodendron aralioides HOM05D002214 ORTHO05D005113 8.8e-25 117.5 73 82.2
Peaxi162Scf01270g00125 Petunia axillaris HOM05D002214 ORTHO05D005113 1.2e-24 117.1 73 82.2
CARHR199660 Cardamine hirsuta HOM05D002214 ORTHO05D005113 1.5e-24 116.7 75 80.0
CDE08G0672 Ceratophyllum demersum HOM05D002214 ORTHO05D005113 1.5e-24 116.7 76 78.9
BcaNung04183 Brassica carinata HOM05D002214 ORTHO05D005113 2.0e-24 116.3 75 80.0
BcaNung04185 Brassica carinata HOM05D002214 ORTHO05D005113 2.0e-24 116.3 75 80.0
A02p02180 Brassica napus HOM05D002214 ORTHO05D005113 2.0e-24 116.3 75 80.0
C02p06430 Brassica napus HOM05D002214 ORTHO05D005113 2.0e-24 116.3 75 80.0
BolC2t06589H Brassica oleracea HOM05D002214 ORTHO05D005113 2.0e-24 116.3 75 80.0
ATR0322G021 Amborella trichopoda HOM05D002214 ORTHO05D005113 2.6e-24 115.9 72 83.3
Aqoxy1G00322 Aquilegia oxysepala HOM05D002214 ORTHO05D005113 2.6e-24 115.9 82 75.6
TWI09G0624 Tripterygium wilfordii HOM05D002214 ORTHO05D005113 2.6e-24 115.9 75 80.0
CDE02G0928 Ceratophyllum demersum HOM05D002214 ORTHO05D005113 4.4e-24 115.2 72 83.3
Sc11g0003930 Simmondsia chinensis HOM05D002214 ORTHO05D005113 4.4e-24 115.2 77 77.9
EL10Ac2g04370 Beta vulgaris HOM05D002214 ORTHO05D005113 7.5e-24 114.4 72 83.3
Migut.B01260 Erythranthe guttata HOM05D002214 ORTHO05D005113 7.5e-24 114.4 73 80.8
Peaxi162Scf00071g01032 Petunia axillaris HOM05D002214 ORTHO05D005113 7.5e-24 114.4 73 82.2
Oeu047606.1 Olea europaea HOM05D002214 ORTHO05D005113 1.7e-23 113.2 73 79.5
Aqoxy2G02029 Aquilegia oxysepala HOM05D002214 ORTHO05D005113 2.2e-23 112.8 76 80.3
arahy.Tifrunner.gnm1.ann1.EWEG8C Arachis hypogaea HOM05D002214 ORTHO05D005113 4.8e-23 111.7 94 85.1
SEGI_02460 Sequoiadendron giganteum HOM05D002214 ORTHO05D005113 6.3e-23 111.3 79 74.7
SGA_v2.0_scaffold4G02481 Striga asiatica HOM05D002214 ORTHO05D005113 8.3e-23 110.9 92 65.2
Lj7C576T11 Lonicera japonica HOM05D002214 ORTHO05D005113 9.1e-22 107.5 119 63.9
BcaC08g43425 Brassica carinata HOM05D002214 ORTHO05D005113 1.6e-21 106.7 81 70.4
Os04g0635800 Oryza sativa ssp. japonica HOM05D002214 ORTHO05D005113 1.6e-21 106.7 73 75.3
AagrBONN_evm.TU.Sc2ySwM_368.2201 Anthoceros agrestis HOM05D002214 ORTHO05D005113 4.5e-21 105.1 72 75.0
Migut.N01799 Erythranthe guttata HOM05D002214 ORTHO05D005113 4.5e-21 105.1 77 72.7
Zm00001eb069290 Zea mays HOM05D002214 ORTHO05D005113 4.5e-21 105.1 73 74.0
CBR_g48990 Chara braunii HOM05D002214 ORTHO05D005113 7.7e-21 104.4 73 76.7
Oeu014596.2 Olea europaea HOM05D002214 ORTHO05D005113 1.0e-20 104.0 117 53.8
Pp3c7_5970 Physcomitrium patens HOM05D002214 ORTHO05D005113 2.9e-20 102.4 70 75.7
Mapoly0014s0153 Marchantia polymorpha HOM05D002214 ORTHO05D005113 5.0e-20 101.7 69 75.4
Zm00001eb431690 Zea mays HOM05D002214 ORTHO05D005113 5.0e-20 101.7 73 72.6
DCAR_022372 Daucus carota HOM05D002214 ORTHO05D005113 6.6e-20 101.3 71 73.2
SMO137G0156 Selaginella moellendorffii HOM05D002214 ORTHO05D005113 4.2e-19 98.6 66 75.8
MD07G1016300 Malus domestica HOM05D002214 ORTHO05D005113 3.7e-15 85.5 54 83.3
MD07G1016800 Malus domestica HOM05D002214 ORTHO05D005113 3.7e-15 85.5 54 83.3
Cre08.g364450 Chlamydomonas reinhardtii HOM05D002214 ORTHO05D005113 8.3e-15 84.3 67 61.2
PSO339G1308 Papaver somniferum HOM05D002214 ORTHO05D005113 1.1e-14 84.0 73 61.6
PRCOL_00004224 Prasinoderma coloniale HOM05D002214 ORTHO05D005113 1.4e-14 83.6 67 64.2
Haze_26658 Corylus avellana HOM05D002214 ORTHO05D005113 7.0e-14 81.3 69 60.9
PSO384G1687 Papaver somniferum HOM05D002214 ORTHO05D005113 3.5e-13 79.0 74 59.5
PSO384G0821 Papaver somniferum HOM05D002214 ORTHO05D005113 2.9e-12 75.9 73 57.5
PSO339G2857 Papaver somniferum HOM05D002214 ORTHO05D005113 3.8e-12 75.5 74 56.8
HPP92_012859 Vanilla planifolia HOM05D002214 ORTHO05D005113 6.6e-12 74.7 72 58.3
MCO11G341 Micromonas commoda HOM05D002214 ORTHO05D005113 1.1e-11 73.9 65 60.0
PSO339G2935 Papaver somniferum HOM05D002214 ORTHO05D005113 1.5e-11 73.6 74 56.8
PSO384G2456 Papaver somniferum HOM05D002214 ORTHO05D005113 5.6e-11 71.6 73 54.8
PSO384G5131 Papaver somniferum HOM05D002214 ORTHO05D005113 7.3e-11 71.2 75 52.0
PSO384G0095 Papaver somniferum HOM05D002214 ORTHO05D005113 3.1e-09 65.9 102 42.2
PSO384G3036 Papaver somniferum HOM05D002214 ORTHO05D005113 8.9e-09 64.3 69 53.6
PSO339G3802 Papaver somniferum HOM05D002214 ORTHO05D005113 1.2e-08 63.9 74 54.1
Cfa022421 Carpinus fangiana HOM05D002214 ORTHO05D005113 2.6e-08 62.8 69 50.7
Medtr3g030055 Medicago truncatula HOM05D002214 ORTHO05D005113 7.5e-08 61.2 71 49.3
PSO384G2386 Papaver somniferum HOM05D002214 ORTHO05D005113 3.7e-07 58.9 65 50.8
unitig_46.g18668 Utricularia gibba HOM05D002214 ORTHO05D005113 8.3e-07 57.8 69 52.2


User provided reference genes

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