Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.11UFCR Arachis hypogaea HOM05D001966 ORTHO05D010449 1.0e-44 183.0 89 100.0
arahy.Tifrunner.gnm1.ann1.818UAU Arachis hypogaea HOM05D001966 ORTHO05D010449 1.7e-23 112.5 59 88.1
BcaC04g20781 Brassica carinata HOM05D001966 ORTHO05D010449 1.1e-22 109.8 59 86.4
BcaNung01515 Brassica carinata HOM05D001966 ORTHO05D010449 1.1e-22 109.8 59 86.4
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 1.1e-22 109.8 59 86.4
BraSC138t45527Z Brassica rapa HOM05D001966 ORTHO05D010449 1.1e-22 109.8 59 86.4
BraSC25t45919Z Brassica rapa HOM05D001966 ORTHO05D010449 1.1e-22 109.8 59 86.4
BraSC59t46542Z Brassica rapa HOM05D001966 ORTHO05D010449 1.1e-22 109.8 59 86.4
Cpa.g.c43052.2 Carica papaya HOM05D001966 ORTHO05D010449 1.1e-22 109.8 59 86.4
VMungo0720G2248 Vigna mungo HOM05D001966 ORTHO05D007227 1.5e-22 109.4 59 86.4
Gohir.A05G323716 Gossypium hirsutum HOM05D001966 ORTHO05D010449 3.2e-22 108.2 59 84.7
Gohir.A09G102700 Gossypium hirsutum HOM05D001966 ORTHO05D010449 3.2e-22 108.2 59 84.7
Nn029s41585 Nelumbo nucifera HOM05D001966 ORTHO05D010449 3.2e-22 108.2 59 86.4
Nn064s42222 Nelumbo nucifera HOM05D001966 ORTHO05D010449 3.2e-22 108.2 59 86.4
Nn212s45202 Nelumbo nucifera HOM05D001966 ORTHO05D010449 3.2e-22 108.2 59 86.4
Nn264s45946 Nelumbo nucifera HOM05D001966 ORTHO05D010449 3.2e-22 108.2 59 86.4
LjContig00319g0014927 Lotus japonicus HOM05D001966 ORTHO05D007227 4.2e-22 107.8 70 78.6
Potri.011G074100 Populus trichocarpa HOM05D001966 ORTHO05D010449 1.2e-21 106.3 59 83.1
Cpa.g.c38922 Carica papaya HOM05D001966 ORTHO05D010449 1.6e-21 105.9 59 83.1
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 2.1e-21 105.5 83 67.5
Ca_03784_v3 Cicer arietinum L. HOM05D001966 ORTHO05D010449 2.1e-21 105.5 59 84.7
Lj3g0016717 Lotus japonicus HOM05D001966 ORTHO05D010449 2.1e-21 105.5 59 84.7
Nn8g40933 Nelumbo nucifera HOM05D001966 ORTHO05D010449 2.1e-21 105.5 59 84.7
FAN06G1313 Fragaria x ananassa HOM05D001966 ORTHO05D010449 2.7e-21 105.1 59 84.7
Phvul.006G154100 Phaseolus vulgaris HOM05D001966 ORTHO05D010449 6.1e-21 104.0 59 83.1
Gorai.008G094200 Gossypium raimondii HOM05D001966 ORTHO05D010449 1.4e-20 102.8 59 83.1
EL10Ac8g19703 Beta vulgaris HOM05D001966 ORTHO05D010449 1.8e-20 102.4 59 81.4
Hma1.2p1_0642F.1_g194360 Hydrangea macrophylla HOM05D001966 ORTHO05D010449 1.8e-20 102.4 59 79.7
Gohir.D12G084201 Gossypium hirsutum HOM05D001966 ORTHO05D010449 6.8e-20 100.5 59 81.4
Gohir.A09G034500 Gossypium hirsutum HOM05D001966 ORTHO05D010449 2.0e-19 99.0 58 81.0
Gohir.A10G065960 Gossypium hirsutum HOM05D001966 ORTHO05D010449 2.0e-19 99.0 59 79.7
SHI36541 Sapria himalayana HOM05D001966 ORTHO05D010449 1.7e-18 95.9 54 79.6
Glyma.08G269900 Glycine max HOM05D001966 ORTHO05D010449 2.2e-18 95.5 59 76.3
Gohir.A06G105700 Gossypium hirsutum HOM05D001966 ORTHO05D010449 2.8e-18 95.1 59 74.6
Gohir.D02G151976 Gossypium hirsutum HOM05D001966 ORTHO05D010449 1.8e-17 92.4 69 71.0
Hma1.2p1_0236F.1_g099130 Hydrangea macrophylla HOM05D001966 ORTHO05D010449 3.1e-17 91.7 48 85.4
Gohir.D02G173601 Gossypium hirsutum HOM05D001966 ORTHO05D010449 5.4e-17 90.9 61 72.1
Gohir.A02G069600 Gossypium hirsutum HOM05D001966 ORTHO05D010449 9.1e-17 90.1 62 71.0
Gorai.006G234500 Gossypium raimondii HOM05D001966 ORTHO05D010449 1.1e-14 83.2 54 74.1
Phvul.002G203800 Phaseolus vulgaris HOM05D001966 ORTHO05D010449 3.3e-14 81.6 41 87.8
arahy.Tifrunner.gnm1.ann1.A6TYH4 Arachis hypogaea HOM05D001966 ORTHO05D010449 6.1e-13 77.4 36 91.7
arahy.Tifrunner.gnm1.ann1.EPN6WV Arachis hypogaea HOM05D001966 ORTHO05D010449 6.1e-13 77.4 36 91.7
Gohir.D09G072950 Gossypium hirsutum HOM05D001966 ORTHO05D010449 8.0e-13 77.0 41 80.5
TPR.G18587 Trifolium pratense HOM05D001966 ORTHO05D010449 8.0e-13 77.0 43 79.1
A02p28440 Brassica napus HOM05D001966 ORTHO05D010449 7.5e-11 70.5 43 67.4
BraA02t07879Z Brassica rapa HOM05D001966 ORTHO05D010449 7.5e-11 70.5 43 67.4
arahy.Tifrunner.gnm1.ann1.PU3CYV Arachis hypogaea HOM05D001966 ORTHO05D010449 6.3e-10 67.4 45 62.2
BraSC143t45650Z Brassica rapa HOM05D001966 ORTHO05D010449 4.1e-09 64.7 33 84.8
SHI23682 Sapria himalayana HOM05D001966 ORTHO05D010449 9.2e-09 63.5 31 83.9
Aqoxy4G03063 Aquilegia oxysepala HOM05D000710 ORTHO05D010449 1.2e-08 63.2 39 74.4
Gorai.007G250500 Gossypium raimondii HOM05D001966 ORTHO05D010449 2.7e-08 62.0 47 59.6
Lj4g0021959 Lotus japonicus HOM05D008259 ORTHO05D010449 2.7e-08 62.0 49 61.2
Gohir.D11G237220 Gossypium hirsutum HOM05D001966 ORTHO05D010449 5.9e-08 60.8 38 71.1
Psat0s1116g0080 Pisum sativum HOM05D004182 ORTHO05D007321 2.9e-07 58.5 31 83.9
EL10As15g24132 Beta vulgaris HOM05D008259 ORTHO05D010449 3.9e-07 58.2 25 96.0
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 3.9e-07 58.2 25 96.0
FAN26G2239 Fragaria x ananassa HOM05D004182 ORTHO05D010449 3.9e-07 58.2 25 96.0
Sopen02g009080 Solanum pennellii HOM05D004182 ORTHO05D007321 3.9e-07 58.2 25 96.0
BraSC58t46454Z Brassica rapa HOM05D001966 ORTHO05D010449 8.6e-07 57.0 35 68.6
DCAR_029424 Daucus carota HOM05D001966 ORTHO05D010449 8.6e-07 57.0 26 84.6
Psat4g168320 Pisum sativum HOM05D004182 ORTHO05D007321 1.9e-06 55.8 30 80.0


User provided reference genes

Program Settings