Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.10LCJA Arachis hypogaea HOM05D006361 ORTHO05D007824 5.7e-167 590.9 309 100.0
arahy.Tifrunner.gnm1.ann1.DP1KMD Arachis hypogaea HOM05D006361 ORTHO05D007824 6.7e-107 391.3 379 64.6
arahy.Tifrunner.gnm1.ann1.L5ZJMR Arachis hypogaea HOM05D006361 ORTHO05D007824 1.6e-105 386.7 379 63.6
arahy.Tifrunner.gnm1.ann1.D0LIF0 Arachis hypogaea HOM05D006361 ORTHO05D007824 8.7e-99 364.4 379 61.7
arahy.Tifrunner.gnm1.ann1.3EIQ25 Arachis hypogaea HOM05D006361 ORTHO05D007824 2.0e-95 353.2 406 57.1
Glyma.20G108700 Glycine max HOM05D006361 ORTHO05D007824 7.5e-58 228.4 292 51.0
VMungo0720G0403 Vigna mungo HOM05D006361 ORTHO05D007824 1.6e-55 220.7 290 50.0
Lj5g0003295 Lotus japonicus HOM05D006361 ORTHO05D007824 1.0e-54 218.0 292 48.6
Lalb_Chr02g0143351 Lupinus albus HOM05D006361 ORTHO05D007824 1.9e-53 213.8 289 48.8
Dinv06050 Davidia involucrata HOM05D006361 ORTHO05D007824 2.9e-46 189.9 273 45.1
Cfa015091 Carpinus fangiana HOM05D006361 ORTHO05D007824 8.6e-46 188.3 288 42.4
GSVIVG01000604001 Vitis vinifera HOM05D006361 ORTHO05D007824 1.1e-45 188.0 293 42.7
CiPaw.05G161000 Carya illinoinensis HOM05D006361 ORTHO05D007824 9.5e-45 184.9 296 41.9
QL03p040836 Quercus lobata HOM05D006361 ORTHO05D007824 2.6e-42 176.8 301 40.2
TAR371G0655 Trochodendron aralioides HOM05D006361 ORTHO05D007824 4.4e-42 176.0 289 41.2
Medtr1g112360 Medicago truncatula HOM05D006361 ORTHO05D007824 3.7e-41 172.9 290 43.8
Psat6g231640 Pisum sativum HOM05D006361 ORTHO05D007824 4.9e-41 172.6 290 42.1
CSS0021447 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 1.1e-40 171.4 307 40.4
CSS0002219 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 1.4e-40 171.0 307 40.1
Hma1.2p1_0068F.1_g037170 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 2.4e-40 170.2 290 40.0
TPR.G2489 Trifolium pratense HOM05D006361 ORTHO05D007824 2.4e-40 170.2 290 41.4
HanXRQChr08g0224371 Helianthus annuus HOM05D006361 ORTHO05D007824 1.6e-39 167.5 287 39.7
Prupe.1G340600 Prunus persica HOM05D006361 ORTHO05D007824 2.7e-39 166.8 288 43.4
Ciclev10005401m.g Citrus clementina HOM05D006361 ORTHO05D007824 4.6e-39 166.0 285 40.7
Atru.chr11.1031 Acer truncatum HOM05D006361 ORTHO05D007824 7.8e-39 165.2 289 40.5
ClCG11G000690 Citrullus lanatus HOM05D006361 ORTHO05D007824 7.8e-39 165.2 287 40.4
PGR142G2205 Punica granatum HOM05D006361 ORTHO05D007824 7.8e-39 165.2 294 39.1
Cpa.g.sc2.83 Carica papaya HOM05D006361 ORTHO05D007824 1.0e-38 164.9 286 40.9
MD16G1010000 Malus domestica HOM05D006361 ORTHO05D007824 2.3e-38 163.7 288 41.3
TWI74G1113 Tripterygium wilfordii HOM05D006361 ORTHO05D007824 3.9e-38 162.9 287 39.7
Aqoxy3G04165 Aquilegia oxysepala HOM05D006361 ORTHO05D007824 8.6e-38 161.8 289 38.4
Rhsim04G0169300 Rhododendron simsii HOM05D006361 ORTHO05D007824 1.9e-37 160.6 288 40.6
Thecc.02G299900 Theobroma cacao HOM05D006361 ORTHO05D007824 1.9e-37 160.6 284 40.1
Potri.010G099500 Populus trichocarpa HOM05D006361 ORTHO05D007824 3.3e-37 159.8 285 37.5
Sed0017139 Sechium edule HOM05D006361 ORTHO05D007824 4.3e-37 159.5 286 38.1
Lj6A727G89 Lonicera japonica HOM05D006361 ORTHO05D007824 2.1e-36 157.1 303 38.9
Nn4g24771 Nelumbo nucifera HOM05D006361 ORTHO05D007824 2.1e-36 157.1 288 40.6
MELO3C022554.2 Cucumis melo HOM05D006361 ORTHO05D007824 3.6e-36 156.4 285 40.0
CAN.G282.86 Capsicum annuum HOM05D006361 ORTHO05D007824 6.2e-36 155.6 288 39.2
Peaxi162Scf00705g00017 Petunia axillaris HOM05D006361 ORTHO05D007824 6.2e-36 155.6 290 39.3
Ca_11202_v3 Cicer arietinum L. HOM05D006361 ORTHO05D007824 1.4e-35 154.5 201 49.8
FAN22G0651 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.4e-35 154.5 282 39.7
Sopen01g014340 Solanum pennellii HOM05D006361 ORTHO05D007824 1.4e-35 154.5 288 39.6
Phvul.007G020000 Phaseolus vulgaris HOM05D006361 ORTHO05D007824 1.8e-35 154.1 241 43.2
FAN17G1000 Fragaria x ananassa HOM05D006361 ORTHO05D007824 4.0e-35 152.9 282 39.4
Nitab4.5_0003889g0010 Nicotiana tabacum HOM05D006361 ORTHO05D007824 6.8e-35 152.1 288 38.9
FvH4_4g35990 Fragaria vesca HOM05D006361 ORTHO05D007824 8.9e-35 151.8 282 39.4
Gohir.D02G138700 Gossypium hirsutum HOM05D006361 ORTHO05D007824 1.5e-34 151.0 296 39.2
FAN12G2025 Fragaria x ananassa HOM05D006361 ORTHO05D007824 2.0e-34 150.6 282 39.4
Gohir.A03G114200 Gossypium hirsutum HOM05D006361 ORTHO05D007824 3.4e-34 149.8 298 39.3
Hma1.2p1_0068F.1_g037190 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 4.4e-34 149.4 263 38.8
FAN07G0576 Fragaria x ananassa HOM05D006361 ORTHO05D007824 5.8e-34 149.1 282 39.0
Gorai.005G155100 Gossypium raimondii HOM05D006361 ORTHO05D007824 5.8e-34 149.1 296 38.9
Sopen01g010510 Solanum pennellii HOM05D006361 ORTHO05D007824 5.8e-34 149.1 288 38.5
PGSC0003DMG400030230 Solanum tuberosum HOM05D006361 ORTHO05D007824 7.5e-34 148.7 288 38.9
Cc11_g04970 Coffea canephora HOM05D006361 ORTHO05D007824 2.2e-33 147.1 289 40.1
Oeu005683.1 Olea europaea HOM05D006361 ORTHO05D007824 1.1e-32 144.8 293 37.5
RcHm_v2.0_Chr4g0445621 Rosa chinensis HOM05D006361 ORTHO05D007824 1.1e-32 144.8 283 38.9
Sabra10G0072200 Salix brachista HOM05D006361 ORTHO05D007824 1.4e-32 144.4 304 34.5
Lsat_1_v5_gn_8_33920 Lactuca sativa HOM05D006361 ORTHO05D007824 1.9e-32 144.1 281 38.4
Nitab4.5_0000944g0110 Nicotiana tabacum HOM05D006361 ORTHO05D007824 1.9e-32 144.1 282 39.4
EL10Ac6g15395 Beta vulgaris HOM05D006361 ORTHO05D007824 3.2e-32 143.3 276 39.9
PSO063G1793 Papaver somniferum HOM05D006361 ORTHO05D007824 4.1e-32 142.9 314 35.7
COL.COLO4_27543 Corchorus olitorius HOM05D006361 ORTHO05D007824 1.2e-31 141.4 273 37.4
ECA233G5480 Erigeron canadensis HOM05D006361 ORTHO05D007824 2.7e-31 140.2 288 37.8
Aa31LG1G5840 Aethionema arabicum HOM05D006361 ORTHO05D007824 3.5e-31 139.8 305 35.1
Eucgr.G02045 Eucalyptus grandis HOM05D006361 ORTHO05D007824 3.5e-31 139.8 289 34.9
Manes.15G141000 Manihot esculenta HOM05D006361 ORTHO05D007824 6.0e-31 139.0 278 36.3
BcaB03g13282 Brassica carinata HOM05D006361 ORTHO05D007824 1.3e-30 137.9 305 35.4
AUR62017787 Chenopodium quinoa HOM05D006361 ORTHO05D007824 1.7e-30 137.5 275 38.5
QL03p040440 Quercus lobata HOM05D006361 ORTHO05D007824 1.7e-30 137.5 403 30.0
Carub.0001s0863 Capsella rubella HOM05D006361 ORTHO05D007824 3.9e-30 136.3 292 34.9
THA.LOC104815221 Tarenaya hassleriana HOM05D006361 ORTHO05D007824 1.1e-29 134.8 305 33.8
AT1G09290 Arabidopsis thaliana HOM05D006361 ORTHO05D007824 1.9e-29 134.0 292 36.0
CARHR009260 Cardamine hirsuta HOM05D006361 ORTHO05D007824 1.9e-29 134.0 288 36.1
DCAR_030322 Daucus carota HOM05D006361 ORTHO05D007824 1.9e-29 134.0 293 36.5
BcaC07g38489 Brassica carinata HOM05D006361 ORTHO05D007824 4.3e-29 132.9 304 34.5
C08p12590 Brassica napus HOM05D006361 ORTHO05D007824 4.3e-29 132.9 304 34.5
CsaV3_5G012340 Cucumis sativus L. HOM05D006361 ORTHO05D007824 5.6e-29 132.5 251 37.8
BraA08t35382Z Brassica rapa HOM05D006361 ORTHO05D007824 9.5e-29 131.7 306 35.3
A08p34700 Brassica napus HOM05D006361 ORTHO05D007824 1.2e-28 131.3 306 35.3
Thhalv10008047m.g Eutrema salsugineum HOM05D006361 ORTHO05D007824 1.1e-27 128.3 310 34.8
Ah.03g147180 Amaranthus hybridus HOM05D006361 ORTHO05D007824 1.8e-27 127.5 267 37.8
AL1G19780 Arabidopsis lyrata HOM05D006361 ORTHO05D007824 1.8e-27 127.5 292 35.6
PSO782G3204 Papaver somniferum HOM05D006361 ORTHO05D007824 3.1e-27 126.7 251 35.9
BolC8t48897H Brassica oleracea HOM05D006361 ORTHO05D007824 4.0e-27 126.3 314 33.8
CDE04G0863 Ceratophyllum demersum HOM05D006361 ORTHO05D007824 2.6e-26 123.6 285 34.4
Sp1g07900 Schrenkiella parvula HOM05D006361 ORTHO05D007824 4.4e-26 122.9 306 34.6
Os02g0672400 Oryza sativa ssp. japonica HOM05D006361 ORTHO05D007824 3.7e-25 119.8 289 34.3
HPP92_007296 Vanilla planifolia HOM05D006361 ORTHO05D007824 5.4e-24 115.9 288 32.6
Glyma.10G280900 Glycine max HOM05D006361 ORTHO05D007824 1.2e-23 114.8 193 44.6
Haze_10736 Corylus avellana HOM05D006361 ORTHO05D007824 2.7e-23 113.6 77 72.7
ATR0807G049 Amborella trichopoda HOM05D006361 ORTHO05D007824 7.8e-23 112.1 290 33.4
AUR62003478 Chenopodium quinoa HOM05D006361 ORTHO05D007824 1.0e-22 111.7 83 67.5
Hund12782 Selenicereus undatus HOM05D006361 ORTHO05D007824 1.3e-22 111.3 77 70.1
Duzib251G0777 Durio zibethinus HOM05D006361 ORTHO05D007824 1.7e-22 110.9 76 72.4
MBI06_g04759_MAGBIO Magnolia biondii HOM05D006361 ORTHO05D007824 1.9e-21 107.5 76 71.1
Actinidia34046 Actinidia chinensis HOM05D006361 ORTHO05D007824 5.6e-21 105.9 70 75.7
vmacro08586 Vaccinium macrocarpon HOM05D006361 ORTHO05D007824 9.5e-21 105.1 315 33.0
Haze_10738 Corylus avellana HOM05D006361 ORTHO05D007824 3.1e-19 100.1 162 43.2
SEGI_09761 Sequoiadendron giganteum HOM05D006361 ORTHO05D007824 5.8e-18 95.9 337 28.8
Sc11g0003580 Simmondsia chinensis HOM05D006361 ORTHO05D007824 3.4e-10 70.1 158 39.9
Mapoly0161s0009 Marchantia polymorpha HOM05D006361 ORTHO05D007824 5.4e-08 62.8 83 39.8
VMungo0251G1708 Vigna mungo HOM05D006361 ORTHO05D007824 7.1e-08 62.4 76 52.6
Oeu038968.1 Olea europaea HOM05D006361 ORTHO05D007824 9.3e-08 62.0 66 53.0
CBR_g51236 Chara braunii HOM05D006361 ORTHO05D007824 5.1e-06 56.2 88 37.5
Actinidia34045 Actinidia chinensis HOM05D006361 ORTHO05D007824 6.6e-06 55.8 82 42.7
AagrBONN_evm.TU.Sc2ySwM_228.545 Anthoceros agrestis HOM05D006361 ORTHO05D007824 8.7e-06 55.5 68 45.6


User provided reference genes

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