Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.0YQ56L Arachis hypogaea HOM05D005182 ORTHO05D006631 1.9e-86 322.4 156 100.0
Glyma.05G004900 Glycine max HOM05D005182 ORTHO05D006631 3.7e-53 211.8 153 68.6
Phvul.004G010800 Phaseolus vulgaris HOM05D005182 ORTHO05D006631 8.1e-53 210.7 154 67.5
VMungo0464G0237 Vigna mungo HOM05D005182 ORTHO05D006631 2.4e-52 209.1 153 67.3
Lj2g0004707 Lotus japonicus HOM05D005182 ORTHO05D006631 6.4e-50 201.1 153 65.4
TPR.G14069 Trifolium pratense HOM05D005182 ORTHO05D006631 8.4e-50 200.7 153 65.4
Actinidia06755 Actinidia chinensis HOM05D005182 ORTHO05D006631 4.6e-48 194.9 153 62.1
Psat1g190920 Pisum sativum HOM05D005182 ORTHO05D006631 4.6e-48 194.9 152 63.8
Ca_04172_v3 Cicer arietinum L. HOM05D005182 ORTHO05D006631 7.9e-48 194.1 153 64.1
DCAR_011246 Daucus carota HOM05D005182 ORTHO05D006631 7.9e-48 194.1 153 61.4
Medtr6g005390 Medicago truncatula HOM05D005182 ORTHO05D006631 7.9e-48 194.1 153 62.7
CAN.G1799.12 Capsicum annuum HOM05D005182 ORTHO05D006631 3.0e-47 192.2 152 62.5
QL02p075210 Quercus lobata HOM05D005182 ORTHO05D006631 3.9e-47 191.8 153 62.1
MD09G1028700 Malus domestica HOM05D005182 ORTHO05D006631 5.1e-47 191.4 153 62.1
Peaxi162Scf00129g01422 Petunia axillaris HOM05D005182 ORTHO05D006631 5.1e-47 191.4 152 62.5
Nitab4.5_0002682g0020 Nicotiana tabacum HOM05D005182 ORTHO05D006631 6.7e-47 191.0 152 62.5
Nitab4.5_0005432g0010 Nicotiana tabacum HOM05D005182 ORTHO05D006631 8.7e-47 190.7 152 61.8
Cfa007391 Carpinus fangiana HOM05D005182 ORTHO05D006631 1.9e-46 189.5 153 61.4
PGSC0003DMG400000477 Solanum tuberosum HOM05D005182 ORTHO05D006631 1.9e-46 189.5 152 61.8
TWI12G0687 Tripterygium wilfordii HOM05D005182 ORTHO05D006631 1.9e-46 189.5 153 60.8
TAR629G2348 Trochodendron aralioides HOM05D005182 ORTHO05D006631 1.9e-46 189.5 153 59.5
GSVIVG01032428001 Vitis vinifera HOM05D005182 ORTHO05D006631 2.5e-46 189.1 153 60.8
Atru.chr6.2358 Acer truncatum HOM05D005182 ORTHO05D006631 3.3e-46 188.7 153 61.4
Manes.17G115200 Manihot esculenta HOM05D005182 ORTHO05D006631 3.3e-46 188.7 153 60.8
Oeu057055.1 Olea europaea HOM05D005182 ORTHO05D006631 3.3e-46 188.7 154 58.4
Peaxi162Scf00304g01217 Petunia axillaris HOM05D005182 ORTHO05D006631 3.3e-46 188.7 152 61.8
SalBow1G7073 Salvia bowleyana HOM05D005182 ORTHO05D006631 3.3e-46 188.7 154 60.4
Solyc02g086560.3 Solanum lycopersicum HOM05D005182 ORTHO05D006631 4.3e-46 188.3 152 61.2
Aqoxy3G02839 Aquilegia oxysepala HOM05D005182 ORTHO05D006631 5.6e-46 188.0 153 60.8
CANSAT64G2419 Cannabis sativa HOM05D005182 ORTHO05D006631 7.4e-46 187.6 153 58.8
Cc07_g01870 Coffea canephora HOM05D005182 ORTHO05D006631 7.4e-46 187.6 153 60.1
Haze_14718 Corylus avellana HOM05D005182 ORTHO05D006631 7.4e-46 187.6 153 60.8
PGR024G0002 Punica granatum HOM05D005182 ORTHO05D006631 7.4e-46 187.6 153 60.8
ECA246G2600 Erigeron canadensis HOM05D005182 ORTHO05D006631 9.6e-46 187.2 153 59.5
Dinv35097 Davidia involucrata HOM05D005182 ORTHO05D006631 1.3e-45 186.8 153 58.8
HanXRQChr17g0548351 Helianthus annuus HOM05D005182 ORTHO05D006631 1.6e-45 186.4 153 60.1
Thecc.04G015200 Theobroma cacao HOM05D005182 ORTHO05D006631 1.6e-45 186.4 153 59.5
CARHR040200 Cardamine hirsuta HOM05D005182 ORTHO05D006631 2.8e-45 185.7 155 58.7
CiPaw.02G035100 Carya illinoinensis HOM05D005182 ORTHO05D006631 2.8e-45 185.7 153 59.5
COL.COLO4_29086 Corchorus olitorius HOM05D005182 ORTHO05D006631 2.8e-45 185.7 153 58.8
MBI16_g14596_MAGBIO Magnolia biondii HOM05D005182 ORTHO05D006631 2.8e-45 185.7 153 58.8
Rhsim02G0095200 Rhododendron simsii HOM05D005182 ORTHO05D006631 3.7e-45 185.3 168 56.5
RcHm_v2.0_Chr2g0173081 Rosa chinensis HOM05D005182 ORTHO05D006631 3.7e-45 185.3 153 58.8
Sopen02g031300 Solanum pennellii HOM05D005182 ORTHO05D006631 3.7e-45 185.3 152 60.5
Ciclev10016757m.g Citrus clementina HOM05D005182 ORTHO05D006631 6.2e-45 184.5 153 61.4
SGA_v2.0_scaffold481G52321 Striga asiatica HOM05D005182 ORTHO05D006631 6.2e-45 184.5 152 58.6
Prupe.3G289500 Prunus persica HOM05D005182 ORTHO05D006631 8.2e-45 184.1 153 60.8
Sabra01G0148000 Salix brachista HOM05D005182 ORTHO05D006631 8.2e-45 184.1 153 60.1
Cpa.g.c28071.2 Carica papaya HOM05D005182 ORTHO05D006631 1.1e-44 183.7 153 58.8
Eucgr.J02232 Eucalyptus grandis HOM05D005182 ORTHO05D006631 1.1e-44 183.7 153 58.2
MELO3C021568.2 Cucumis melo HOM05D005182 ORTHO05D006631 1.8e-44 183.0 151 59.6
THA.LOC104801894 Tarenaya hassleriana HOM05D005182 ORTHO05D006631 1.8e-44 183.0 155 58.1
Hma1.2p1_1291F.1_g273570 Hydrangea macrophylla HOM05D005182 ORTHO05D006631 2.4e-44 182.6 153 58.2
Nn3g16771 Nelumbo nucifera HOM05D005182 ORTHO05D006631 2.4e-44 182.6 154 55.8
THA.LOC104807109 Tarenaya hassleriana HOM05D005182 ORTHO05D006631 2.4e-44 182.6 155 57.4
Aa31LG10G4000 Aethionema arabicum HOM05D005182 ORTHO05D006631 4.0e-44 181.8 155 56.8
AL1G57790 Arabidopsis lyrata HOM05D005182 ORTHO05D006631 4.0e-44 181.8 155 57.4
FAN21G0797 Fragaria x ananassa HOM05D005182 ORTHO05D006631 4.0e-44 181.8 153 58.2
arahy.Tifrunner.gnm1.ann1.1JMX4I Arachis hypogaea HOM05D005182 ORTHO05D006631 5.3e-44 181.4 156 64.7
Carub.0001s3930 Capsella rubella HOM05D005182 ORTHO05D006631 5.3e-44 181.4 155 57.4
PGR142G3360 Punica granatum HOM05D005182 ORTHO05D006631 6.9e-44 181.0 153 60.1
Gohir.A07G222400 Gossypium hirsutum HOM05D005182 ORTHO05D006631 9.0e-44 180.6 153 56.9
vmacro04855 Vaccinium macrocarpon HOM05D005182 ORTHO05D006631 9.0e-44 180.6 156 60.3
Potri.001G178800 Populus trichocarpa HOM05D005182 ORTHO05D006631 1.2e-43 180.3 153 58.2
A08p03300 Brassica napus HOM05D005182 ORTHO05D006631 2.0e-43 179.5 155 56.1
Sp1g37040 Schrenkiella parvula HOM05D005182 ORTHO05D006631 2.0e-43 179.5 155 56.8
Thhalv10011756m.g Eutrema salsugineum HOM05D005182 ORTHO05D006631 2.6e-43 179.1 155 56.8
MD17G1030300 Malus domestica HOM05D005182 ORTHO05D006631 2.6e-43 179.1 158 58.2
AT1G50170 Arabidopsis thaliana HOM05D005182 ORTHO05D006631 3.4e-43 178.7 155 56.8
arahy.Tifrunner.gnm1.ann1.NIKC7C Arachis hypogaea HOM05D005182 ORTHO05D006631 4.5e-43 178.3 132 71.2
FvH4_3g28470 Fragaria vesca HOM05D005182 ORTHO05D006631 5.8e-43 177.9 153 58.2
FAN11G2673 Fragaria x ananassa HOM05D005182 ORTHO05D006631 5.8e-43 177.9 153 58.2
Gohir.D07G229100 Gossypium hirsutum HOM05D005182 ORTHO05D006631 5.8e-43 177.9 153 55.6
Gorai.001G264200 Gossypium raimondii HOM05D005182 ORTHO05D006631 5.8e-43 177.9 153 55.6
CsaV3_5G027220 Cucumis sativus L. HOM05D005182 ORTHO05D006631 1.0e-42 177.2 151 57.6
ATR0661G518 Amborella trichopoda HOM05D005182 ORTHO05D006631 1.3e-42 176.8 151 56.3
AUR62024784 Chenopodium quinoa HOM05D005182 ORTHO05D006631 1.7e-42 176.4 151 57.0
AUR62032437 Chenopodium quinoa HOM05D005182 ORTHO05D006631 1.7e-42 176.4 151 57.0
C03p89510 Brassica napus HOM05D005182 ORTHO05D006631 2.2e-42 176.0 155 55.5
BolC3t21265H Brassica oleracea HOM05D005182 ORTHO05D006631 2.2e-42 176.0 155 55.5
BraA08t32363Z Brassica rapa HOM05D005182 ORTHO05D006631 2.2e-42 176.0 155 55.5
Zm00001eb072570 Zea mays HOM05D005182 ORTHO05D006631 2.9e-42 175.6 154 53.9
unitig_746.g26550 Utricularia gibba HOM05D005182 ORTHO05D006631 3.8e-42 175.3 154 55.8
Medtr6g005410 Medicago truncatula HOM05D005182 ORTHO05D006631 1.4e-41 173.3 152 57.2
CDE06G0683 Ceratophyllum demersum HOM05D005182 ORTHO05D006631 1.9e-41 172.9 153 53.6
Cfa007386 Carpinus fangiana HOM05D005182 ORTHO05D006631 3.2e-41 172.2 145 59.3
CSS0031267 Camellia sinensis var. sinensis HOM05D005182 ORTHO05D006631 5.5e-41 171.4 145 59.3
Sed0010591 Sechium edule HOM05D005182 ORTHO05D006631 1.6e-40 169.9 151 55.6
EL10Ac2g02464 Beta vulgaris HOM05D005182 ORTHO05D006631 2.7e-40 169.1 151 55.0
Migut.H00088 Erythranthe guttata HOM05D005182 ORTHO05D006631 3.9e-39 165.2 154 55.2
Rhsim09G0149800 Rhododendron simsii HOM05D005182 ORTHO05D006631 1.1e-38 163.7 154 55.2
Psat1g058400 Pisum sativum HOM05D005182 ORTHO05D006631 4.3e-38 161.8 151 54.3
RcHm_v2.0_Chr7g0219921 Rosa chinensis HOM05D005182 ORTHO05D006631 1.6e-37 159.8 153 53.6
QL09p000526 Quercus lobata HOM05D005182 ORTHO05D006631 2.4e-36 156.0 135 57.8
FvH4_6g51400 Fragaria vesca HOM05D005182 ORTHO05D006631 6.9e-36 154.5 159 50.9
FAN14G1378 Fragaria x ananassa HOM05D005182 ORTHO05D006631 6.9e-36 154.5 159 50.9
Os02g0296800 Oryza sativa ssp. japonica HOM05D005182 ORTHO05D006631 1.2e-35 153.7 144 50.7
CiPaw.02G035200 Carya illinoinensis HOM05D005182 ORTHO05D006631 2.6e-35 152.5 136 55.1
SMO356G0462 Selaginella moellendorffii HOM05D005182 ORTHO05D006631 4.5e-35 151.8 151 47.7
CiPaw.03G042000 Carya illinoinensis HOM05D005182 ORTHO05D006631 1.0e-34 150.6 153 53.6
MSTRG.3153 Avicennia marina HOM05D005182 ORTHO05D006631 5.0e-34 148.3 84 79.8
RcHm_v2.0_Chr1g0351301 Rosa chinensis HOM05D005182 ORTHO05D006631 1.1e-33 147.1 153 50.3
Duzib187G0244 Durio zibethinus HOM05D005182 ORTHO05D006631 1.9e-33 146.4 137 54.0
ClCG00G002150 Citrullus lanatus HOM05D005182 ORTHO05D006631 3.2e-33 145.6 151 52.3
ClCG09G019170 Citrullus lanatus HOM05D005182 ORTHO05D006631 3.2e-33 145.6 151 52.3
Psat1g058360 Pisum sativum HOM05D005182 ORTHO05D006631 3.2e-33 145.6 152 48.7
Sed0025592 Sechium edule HOM05D005182 ORTHO05D006631 3.2e-33 145.6 151 52.3
CSS0002021 Camellia sinensis var. sinensis HOM05D005182 ORTHO05D006631 1.6e-32 143.3 84 79.8
SEGI_02514 Sequoiadendron giganteum HOM05D005182 ORTHO05D006631 2.7e-32 142.5 84 75.0
Hund03875 Selenicereus undatus HOM05D005182 ORTHO05D006631 1.0e-31 140.6 84 77.4
Pp3c3_11190 Physcomitrium patens HOM05D005182 ORTHO05D006631 1.4e-31 140.2 151 45.0
Dinv33456 Davidia involucrata HOM05D005182 ORTHO05D006631 1.8e-31 139.8 86 74.4
SHI25748 Sapria himalayana HOM05D005182 ORTHO05D006631 6.7e-31 137.9 87 71.3
Cpa.g.sc130.27 Carica papaya HOM05D005182 ORTHO05D006631 8.8e-31 137.5 84 75.0
BcaC01g01215 Brassica carinata HOM05D005182 ORTHO05D006631 2.0e-30 136.3 132 50.0
arahy.Tifrunner.gnm1.ann1.C5A6Z1 Arachis hypogaea HOM05D005182 ORTHO05D006631 4.8e-29 131.7 156 50.6
CBR_g4824 Chara braunii HOM05D005182 ORTHO05D006631 1.2e-27 127.1 152 42.8
AagrBONN_evm.TU.Sc2ySwM_228.389 Anthoceros agrestis HOM05D005182 ORTHO05D006631 3.4e-27 125.6 135 44.4
Mapoly0034s0026 Marchantia polymorpha HOM05D005182 ORTHO05D006631 3.4e-27 125.6 84 67.9
Cpa.g.sc130.26 Carica papaya HOM05D005182 ORTHO05D006631 7.7e-27 124.4 82 69.5
Glyma.17G203751 Glycine max HOM05D005182 ORTHO05D006631 3.8e-26 122.1 75 72.0
MCO08G118 Micromonas commoda HOM05D005182 ORTHO05D006631 3.2e-25 119.0 91 60.4
Cpa.g.sc171.39 Carica papaya HOM05D005182 ORTHO05D006631 2.0e-22 109.8 68 73.5
Prupe.3G289700 Prunus persica HOM05D005182 ORTHO05D006631 5.7e-22 108.2 110 52.7
Prupe.3G207400 Prunus persica HOM05D005182 ORTHO05D006631 6.3e-21 104.8 85 64.7
Sc19g0005880 Simmondsia chinensis HOM05D005182 ORTHO05D006631 6.3e-21 104.8 152 38.8
PRCOL_00003784 Prasinoderma coloniale HOM05D005182 ORTHO05D006847 7.0e-20 101.3 86 57.0
QL10p029699 Quercus lobata HOM05D002292 ORTHO05D008330 2.2e-18 96.3 56 76.8
FAN05G5577 Fragaria x ananassa HOM05D005182 ORTHO05D006631 3.8e-18 95.5 58 72.4
QL04p095684 Quercus lobata HOM05D003881 ORTHO05D004343 6.5e-18 94.7 67 64.2
Cre04.g214100 Chlamydomonas reinhardtii HOM05D005182 ORTHO05D006631 1.4e-17 93.6 96 44.8
Ah.12g060430 Amaranthus hybridus HOM05D005182 ORTHO05D006631 2.5e-17 92.8 152 37.5
MSTRG.15523 Avicennia marina HOM05D005182 ORTHO05D006631 5.5e-17 91.7 54 74.1
Hund04415 Selenicereus undatus HOM05D005182 ORTHO05D006631 5.2e-15 85.1 99 45.5
PRCOL_00005828 Prasinoderma coloniale HOM05D005182 ORTHO05D006631 1.1e-14 84.0 76 53.9
RcHm_v2.0_Chr7g0228061 Rosa chinensis HOM05D005182 ORTHO05D006631 2.2e-13 79.7 100 45.0
Ah.15g100150 Amaranthus hybridus HOM05D008863 ORTHO05D006631 1.4e-12 77.0 101 39.6
EL10Ac5g10908 Beta vulgaris HOM05D005182 ORTHO05D006631 4.5e-11 72.0 43 74.4
EL10Ac6g13785 Beta vulgaris HOM05D005182 ORTHO05D006631 4.5e-11 72.0 43 74.4
EL10Ac6g14578 Beta vulgaris HOM05D002842 ORTHO05D003177 4.5e-11 72.0 43 74.4
Cpa.g.c30633.2 Carica papaya HOM05D005182 ORTHO05D006631 1.0e-10 70.9 94 43.6
RcHm_v2.0_Chr7g0228091 Rosa chinensis HOM05D005182 ORTHO05D344069 9.4e-09 64.3 163 31.9


User provided reference genes

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