Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.0YHR6E Arachis hypogaea HOM05D003347 ORTHO05D003821 1.1e-38 164.5 260 100.0
arahy.Tifrunner.gnm1.ann1.3X6E38 Arachis hypogaea HOM05D003347 ORTHO05D003821 1.1e-38 164.5 260 100.0
Glyma.06G158900 Glycine max HOM05D003347 ORTHO05D003821 2.3e-20 103.6 156 65.4
TPR.G28695 Trifolium pratense HOM05D003347 ORTHO05D003821 7.5e-19 98.6 152 71.7
arahy.Tifrunner.gnm1.ann1.X7GISI Arachis hypogaea HOM05D003347 ORTHO05D003821 7.0e-17 92.0 308 65.3
Ca_17010_v3 Cicer arietinum L. HOM05D003347 ORTHO05D003821 3.5e-16 89.7 152 81.6
CDE08G0312 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 1.3e-15 87.8 152 63.2
Phvul.009G151400 Phaseolus vulgaris HOM05D003347 ORTHO05D003821 5.0e-15 85.9 169 68.0
Haze_25385 Corylus avellana HOM05D003347 ORTHO05D003821 1.9e-14 84.0 151 57.6
TWI31G0129 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 1.4e-12 77.8 184 39.7
Lalb_Chr11g0068781 Lupinus albus HOM05D003347 ORTHO05D003821 4.0e-12 76.3 167 63.5
Hund07201 Selenicereus undatus HOM05D003347 ORTHO05D003821 1.5e-11 74.3 165 50.9
QL10p039663 Quercus lobata HOM05D003347 ORTHO05D003821 2.6e-11 73.6 81 58.0
Glyma.04G206600 Glycine max HOM05D003347 ORTHO05D003821 3.4e-11 73.2 156 75.6
VMungo1309G3119 Vigna mungo HOM05D003347 ORTHO05D003821 7.5e-11 72.0 168 58.3
CSS0039803 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 2.2e-10 70.5 114 52.6
CSS0043936 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 2.2e-10 70.5 114 52.6
Lj1g0014274 Lotus japonicus HOM05D003347 ORTHO05D003821 3.2e-09 66.6 156 59.6
MD15G1423300 Malus domestica HOM05D003347 ORTHO05D003821 9.2e-09 65.1 160 58.8
TWI79G0161 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 4.6e-08 62.8 185 42.7
CiPaw.03G114900 Carya illinoinensis HOM05D003347 ORTHO05D003821 7.8e-08 62.0 183 55.7
PSO063G2612 Papaver somniferum HOM05D003347 ORTHO05D003821 1.3e-07 61.2 185 45.4
Sed0017913 Sechium edule HOM05D003347 ORTHO05D003821 3.0e-07 60.1 81 48.1
Psat5g058160 Pisum sativum HOM05D003347 ORTHO05D003821 3.9e-07 59.7 180 54.4
Thecc.01G142300 Theobroma cacao HOM05D003347 ORTHO05D003821 6.6e-07 58.9 125 56.8
HanXRQChr01g0017031 Helianthus annuus HOM05D003347 ORTHO05D003821 8.6e-07 58.5 81 48.1
Medtr3g097170 Medicago truncatula HOM05D003347 ORTHO05D003821 8.6e-07 58.5 152 77.0
EL10Ac4g09689 Beta vulgaris HOM05D003347 ORTHO05D003821 1.5e-06 57.8 155 50.3
Cfa002207 Carpinus fangiana HOM05D003347 ORTHO05D003821 1.9e-06 57.4 180 35.0
TWI14G1287 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 1.9e-06 57.4 164 61.0
MD15G1137800 Malus domestica HOM05D003347 ORTHO05D003821 3.3e-06 56.6 128 60.9
unitig_60.g25508 Utricularia gibba HOM05D003347 ORTHO05D003821 4.3e-06 56.2 81 49.4
Nitab4.5_0000496g0140 Nicotiana tabacum HOM05D003347 ORTHO05D003821 7.3e-06 55.5 114 44.7


User provided reference genes

Program Settings