Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.0R23JB Arachis hypogaea HOM05D000028 ORTHO05D003251 1.2e-61 239.6 117 100.0
arahy.Tifrunner.gnm1.ann1.CDA9C7 Arachis hypogaea HOM05D000028 ORTHO05D003251 7.5e-43 177.2 125 75.2
arahy.Tifrunner.gnm1.ann1.EV9B18 Arachis hypogaea HOM05D000028 ORTHO05D003251 5.0e-39 164.5 99 82.8
arahy.Tifrunner.gnm1.ann1.3M16KW Arachis hypogaea HOM05D000028 ORTHO05D003251 2.5e-38 162.2 118 71.2
arahy.Tifrunner.gnm1.ann1.12D61J Arachis hypogaea HOM05D000028 ORTHO05D003251 6.8e-36 154.1 111 73.9
Ca_21169_v3 Cicer arietinum L. HOM05D000028 ORTHO05D003251 2.8e-29 132.1 125 53.6
Medtr4g129650 Medicago truncatula HOM05D000028 ORTHO05D003251 6.8e-28 127.5 124 51.6
Psat0s1163g0080 Pisum sativum HOM05D000028 ORTHO05D003251 6.8e-28 127.5 124 53.2
TPR.G24868 Trifolium pratense HOM05D000028 ORTHO05D003251 6.8e-28 127.5 124 52.4
VMungo1215G0415 Vigna mungo HOM05D000028 ORTHO05D003251 2.0e-27 125.9 126 56.3
Phvul.003G151700 Phaseolus vulgaris HOM05D000028 ORTHO05D003251 1.7e-26 122.9 124 53.2
Lalb_Chr12g0198921 Lupinus albus HOM05D000028 ORTHO05D003251 1.1e-25 120.2 124 50.0
Psat0s1163g0040 Pisum sativum HOM05D000028 ORTHO05D003251 2.4e-25 119.0 122 50.8
Glyma.13G091100 Glycine max HOM05D000028 ORTHO05D003251 5.4e-25 117.9 124 51.6
Lj4g0014384 Lotus japonicus HOM05D000028 ORTHO05D003251 1.3e-23 113.2 123 50.4
Lj4g0023895 Lotus japonicus HOM05D000028 ORTHO05D003251 9.5e-22 107.1 123 49.6
Gorai.012G096400 Gossypium raimondii HOM05D000028 ORTHO05D003251 6.2e-21 104.4 125 45.6
Oeu052225.1 Olea europaea HOM05D000028 ORTHO05D003251 1.7e-18 96.3 124 42.7
Thecc.09G159200 Theobroma cacao HOM05D000028 ORTHO05D003251 1.7e-18 96.3 123 43.9
Cpa.g.sc127.41 Carica papaya HOM05D000028 ORTHO05D003251 2.9e-18 95.5 121 50.4
Potri.006G177700 Populus trichocarpa HOM05D000028 ORTHO05D003251 2.9e-18 95.5 124 43.5
QL02p095447 Quercus lobata HOM05D000028 ORTHO05D003251 1.4e-17 93.2 123 43.1
Dinv41310 Davidia involucrata HOM05D000028 ORTHO05D003251 3.2e-17 92.0 124 41.1
Oeu052224.1 Olea europaea HOM05D000028 ORTHO05D003251 3.2e-17 92.0 121 42.1
Atru.chr7.464 Acer truncatum HOM05D000028 ORTHO05D003251 4.1e-17 91.7 126 43.7
CSS0036448 Camellia sinensis var. sinensis HOM05D000028 ORTHO05D003251 4.1e-17 91.7 124 41.9
COL.COLO4_08662 Corchorus olitorius HOM05D000028 ORTHO05D003251 4.1e-17 91.7 123 43.9
SalBow1G1424 Salvia bowleyana HOM05D000028 ORTHO05D003251 4.1e-17 91.7 124 41.9
DCAR_017939 Daucus carota HOM05D000028 ORTHO05D003251 1.2e-16 90.1 125 42.4
CSS0003968 Camellia sinensis var. sinensis HOM05D000028 ORTHO05D003251 2.7e-16 89.0 124 41.1
Prupe.1G098100 Prunus persica HOM05D000028 ORTHO05D003251 3.5e-16 88.6 126 39.7
Ciclev10010601m.g Citrus clementina HOM05D000028 ORTHO05D003251 4.6e-16 88.2 124 39.5
CANSAT11G2188 Cannabis sativa HOM05D000028 ORTHO05D003251 6.0e-16 87.8 126 44.4
TWI32G0845 Tripterygium wilfordii HOM05D000028 ORTHO05D003251 7.8e-16 87.4 124 36.3
Haze_21271 Corylus avellana HOM05D000028 ORTHO05D003251 1.0e-15 87.0 124 40.3
Glyma.03G117000 Glycine max HOM05D000028 ORTHO05D003251 1.0e-15 87.0 123 41.5
CSS0034609 Camellia sinensis var. sinensis HOM05D000028 ORTHO05D003251 1.3e-15 86.7 121 41.3
Ciclev10008665m.g Citrus clementina HOM05D000028 ORTHO05D003251 1.3e-15 86.7 126 38.1
Hma1.2p1_1495F.1_g286990 Hydrangea macrophylla HOM05D000028 ORTHO05D003251 1.3e-15 86.7 124 39.5
CSS0035502 Camellia sinensis var. sinensis HOM05D000028 ORTHO05D003251 1.7e-15 86.3 121 41.3
Potri.006G177800 Populus trichocarpa HOM05D000028 ORTHO05D003251 1.7e-15 86.3 123 41.5
Cfa012915 Carpinus fangiana HOM05D000028 ORTHO05D003251 3.0e-15 85.5 124 39.5
Manes.14G163300 Manihot esculenta HOM05D000028 ORTHO05D003251 3.0e-15 85.5 123 42.3
Peaxi162Scf00934g00151 Petunia axillaris HOM05D000028 ORTHO05D003251 3.9e-15 85.1 129 36.4
MSTRG.10719 Avicennia marina HOM05D000028 ORTHO05D003251 1.1e-14 83.6 121 40.5
MSTRG.10720 Avicennia marina HOM05D000028 ORTHO05D003251 2.5e-14 82.4 121 38.8
Aqoxy7G02490 Aquilegia oxysepala HOM05D000028 ORTHO05D003251 3.3e-14 82.0 124 34.7
CSS0002861 Camellia sinensis var. sinensis HOM05D000028 ORTHO05D003251 4.3e-14 81.6 124 37.9
Nn2g12554 Nelumbo nucifera HOM05D000028 ORTHO05D003251 4.3e-14 81.6 123 38.2
Thecc.09G159500 Theobroma cacao HOM05D000028 ORTHO05D003251 4.3e-14 81.6 124 40.3
CSS0040973 Camellia sinensis var. sinensis HOM05D000028 ORTHO05D003251 5.6e-14 81.3 124 37.9
TPR.G28926 Trifolium pratense HOM05D000028 ORTHO05D003251 5.6e-14 81.3 124 35.5
CSS0013090 Camellia sinensis var. sinensis HOM05D000028 ORTHO05D003251 7.3e-14 80.9 124 37.1
CANSAT11G0972 Cannabis sativa HOM05D000028 ORTHO05D003251 7.3e-14 80.9 124 36.3
PGSC0003DMG400011223 Solanum tuberosum HOM05D000028 ORTHO05D003251 7.3e-14 80.9 131 35.1
Cfa012916 Carpinus fangiana HOM05D000028 ORTHO05D003251 9.5e-14 80.5 125 38.4
Duzib150G0651 Durio zibethinus HOM05D000028 ORTHO05D003251 9.5e-14 80.5 123 39.8
Migut.J01413 Erythranthe guttata HOM05D000028 ORTHO05D003251 9.5e-14 80.5 125 39.2
Gorai.009G007900 Gossypium raimondii HOM05D000028 ORTHO05D003251 9.5e-14 80.5 127 39.4
Nitab4.5_0001427g0140 Nicotiana tabacum HOM05D000028 ORTHO05D003251 9.5e-14 80.5 129 34.1
TPR.G37543 Trifolium pratense HOM05D000028 ORTHO05D003251 9.5e-14 80.5 126 34.9
Migut.K00278 Erythranthe guttata HOM05D000028 ORTHO05D003251 1.2e-13 80.1 124 38.7
Gohir.D05G007800 Gossypium hirsutum HOM05D000028 ORTHO05D003251 1.6e-13 79.7 127 39.4
TAR383G0834 Trochodendron aralioides HOM05D000028 ORTHO05D003251 1.6e-13 79.7 124 36.3
C07p57860 Brassica napus HOM05D000028 ORTHO05D003251 2.1e-13 79.3 126 39.7
Gohir.A05G006900 Gossypium hirsutum HOM05D000028 ORTHO05D003251 2.1e-13 79.3 127 38.6
Cc06_g14090 Coffea canephora HOM05D000028 ORTHO05D003251 2.8e-13 79.0 125 40.0
Manes.14G163600 Manihot esculenta HOM05D000028 ORTHO05D003251 2.8e-13 79.0 123 40.7
ClCG06G012840 Citrullus lanatus HOM05D000028 ORTHO05D003251 3.6e-13 78.6 127 35.4
Lsat_1_v5_gn_5_87660 Lactuca sativa HOM05D001185 ORTHO05D002551 3.6e-13 78.6 124 35.5
Sopen07g002380 Solanum pennellii HOM05D000028 ORTHO05D003251 3.6e-13 78.6 132 31.8
Atru.chr7.473 Acer truncatum HOM05D000028 ORTHO05D003251 4.7e-13 78.2 125 40.0
BraA03t15041Z Brassica rapa HOM05D000028 ORTHO05D003251 4.7e-13 78.2 126 38.9
CiPaw.08G001400 Carya illinoinensis HOM05D000028 ORTHO05D003251 4.7e-13 78.2 123 35.8
Solyc07g006290.3 Solanum lycopersicum HOM05D000028 ORTHO05D003251 4.7e-13 78.2 132 31.8
A03p59820 Brassica napus HOM05D000028 ORTHO05D003251 6.2e-13 77.8 125 39.2
BraA03t15036Z Brassica rapa HOM05D000028 ORTHO05D003251 6.2e-13 77.8 126 38.9
CAN.G1190.34 Capsicum annuum HOM05D000028 ORTHO05D003251 6.2e-13 77.8 134 33.6
MBI14_g20315_MAGBIO Magnolia biondii HOM05D000028 ORTHO05D003251 6.2e-13 77.8 124 37.1
Potri.018G099500 Populus trichocarpa HOM05D000028 ORTHO05D003251 6.2e-13 77.8 112 39.3
TWI63G1730 Tripterygium wilfordii HOM05D000028 ORTHO05D003251 6.2e-13 77.8 123 36.6
GSVIVG01023731001 Vitis vinifera HOM05D000028 ORTHO05D003251 6.2e-13 77.8 124 39.5
Medtr8g006120 Medicago truncatula HOM05D000028 ORTHO05D003251 8.1e-13 77.4 125 36.8
Thhalv10025504m.g Eutrema salsugineum HOM05D000028 ORTHO05D003251 1.1e-12 77.0 126 37.3
Psat4g227000 Pisum sativum HOM05D000028 ORTHO05D003251 1.1e-12 77.0 124 33.9
Potri.006G177600 Populus trichocarpa HOM05D000028 ORTHO05D003251 1.4e-12 76.6 112 39.3
A03p59850 Brassica napus HOM05D000028 ORTHO05D003251 1.8e-12 76.3 126 38.1
C07p57900 Brassica napus HOM05D000028 ORTHO05D003251 1.8e-12 76.3 126 38.1
Sp7g28300 Schrenkiella parvula HOM05D000028 ORTHO05D003251 1.8e-12 76.3 125 39.2
Medtr8g006050 Medicago truncatula HOM05D000028 ORTHO05D003251 2.3e-12 75.9 127 36.2
BcaNung00546 Brassica carinata HOM05D000028 ORTHO05D003251 3.1e-12 75.5 126 38.1
Eucgr.C00215 Eucalyptus grandis HOM05D000028 ORTHO05D003251 4.0e-12 75.1 124 34.7
Lj9A727T22 Lonicera japonica HOM05D000028 ORTHO05D003251 4.0e-12 75.1 119 36.1
MELO3C010177.2 Cucumis melo HOM05D000028 ORTHO05D003251 5.2e-12 74.7 127 35.4
QL02p095476 Quercus lobata HOM05D000028 ORTHO05D003251 5.2e-12 74.7 123 37.4
THA.LOC104803519 Tarenaya hassleriana HOM05D000028 ORTHO05D003251 5.2e-12 74.7 129 38.0
TPR.G28935 Trifolium pratense HOM05D000028 ORTHO05D003251 5.2e-12 74.7 124 33.1
TAR684G0001 Trochodendron aralioides HOM05D000028 ORTHO05D003251 5.2e-12 74.7 112 40.2
PSO017G3831 Papaver somniferum HOM05D000028 ORTHO05D003251 6.8e-12 74.3 134 32.8
PSO170G1321 Papaver somniferum HOM05D000028 ORTHO05D003251 6.8e-12 74.3 134 32.8
AUR62039757 Chenopodium quinoa HOM05D000028 ORTHO05D003251 8.9e-12 73.9 124 34.7
CsaV3_1G029400 Cucumis sativus L. HOM05D000028 ORTHO05D003251 8.9e-12 73.9 127 35.4
VMungo0331G0471 Vigna mungo HOM05D000028 ORTHO05D003251 8.9e-12 73.9 123 37.4
Medtr2g065550 Medicago truncatula HOM05D000028 ORTHO05D003251 1.2e-11 73.6 124 33.9
Medtr8g006010 Medicago truncatula HOM05D000028 ORTHO05D003251 1.2e-11 73.6 128 35.2
PGR102G0079 Punica granatum HOM05D000028 ORTHO05D003251 1.2e-11 73.6 127 37.0
Sed0006641 Sechium edule HOM05D000028 ORTHO05D003251 1.2e-11 73.6 125 33.6
AT4G30420 Arabidopsis thaliana HOM05D000028 ORTHO05D003251 1.5e-11 73.2 126 36.5
A08p19200 Brassica napus HOM05D000028 ORTHO05D003251 1.5e-11 73.2 125 39.2
BraA08t33882Z Brassica rapa HOM05D000028 ORTHO05D003251 1.5e-11 73.2 125 39.2
AUR62028405 Chenopodium quinoa HOM05D000028 ORTHO05D003251 1.5e-11 73.2 124 34.7
HanXRQChr10g0306501 Helianthus annuus HOM05D000028 ORTHO05D003251 1.5e-11 73.2 124 35.5
Psat4g226200 Pisum sativum HOM05D000028 ORTHO05D003251 1.5e-11 73.2 128 35.2
Psat4g226280 Pisum sativum HOM05D000028 ORTHO05D003251 1.5e-11 73.2 124 34.7
BcaB03g12648 Brassica carinata HOM05D000028 ORTHO05D003251 2.0e-11 72.8 132 35.6
CDE05G2769 Ceratophyllum demersum HOM05D000028 ORTHO05D003251 2.6e-11 72.4 125 39.2
Psat4g227040 Pisum sativum HOM05D000028 ORTHO05D003251 2.6e-11 72.4 124 33.9
BcaC01g01151 Brassica carinata HOM05D000028 ORTHO05D003251 3.4e-11 72.0 132 35.6
C03p88710 Brassica napus HOM05D000028 ORTHO05D003251 3.4e-11 72.0 132 35.6
BolC3t21182H Brassica oleracea HOM05D000028 ORTHO05D003251 3.4e-11 72.0 132 35.6
Actinidia20951 Actinidia chinensis HOM05D000028 ORTHO05D003251 4.4e-11 71.6 125 36.8
EL10Ac8g18874 Beta vulgaris HOM05D000028 ORTHO05D003251 4.4e-11 71.6 124 33.1
vmacro13060 Vaccinium macrocarpon HOM05D000028 ORTHO05D003251 4.4e-11 71.6 125 37.6
BcaNung02990 Brassica carinata HOM05D000028 ORTHO05D003251 5.8e-11 71.2 126 35.7
A01p07750 Brassica napus HOM05D000028 ORTHO05D003251 5.8e-11 71.2 126 36.5
TWI63G0869 Tripterygium wilfordii HOM05D000028 ORTHO05D003251 7.5e-11 70.9 125 34.4
arahy.Tifrunner.gnm1.ann1.4EC6E4 Arachis hypogaea HOM05D000028 ORTHO05D003251 2.2e-10 69.3 128 37.5
arahy.Tifrunner.gnm1.ann1.9RI9QX Arachis hypogaea HOM05D000028 ORTHO05D003251 2.2e-10 69.3 127 37.8
Carub.0007s1018 Capsella rubella HOM05D000028 ORTHO05D003251 2.2e-10 69.3 127 35.4
CARHR238320 Cardamine hirsuta HOM05D000028 ORTHO05D003251 2.9e-10 68.9 126 35.7
MELO3C010178.2 Cucumis melo HOM05D000028 ORTHO05D003251 2.9e-10 68.9 143 29.4
Sed0013548 Sechium edule HOM05D000028 ORTHO05D003251 2.9e-10 68.9 128 36.7
Sed0020069 Sechium edule HOM05D000028 ORTHO05D003251 2.9e-10 68.9 127 37.8
PSO170G1867 Papaver somniferum HOM05D000028 ORTHO05D003251 3.7e-10 68.6 134 30.6
CANSAT11G0239 Cannabis sativa HOM05D000028 ORTHO05D003251 4.9e-10 68.2 132 35.6
PSO017G0336 Papaver somniferum HOM05D000028 ORTHO05D003251 4.9e-10 68.2 134 29.9
Psat4g226240 Pisum sativum HOM05D000028 ORTHO05D003251 4.9e-10 68.2 125 33.6
Rhsim03G0261900 Rhododendron simsii HOM05D000028 ORTHO05D003251 4.9e-10 68.2 124 36.3
Eucgr.C00217 Eucalyptus grandis HOM05D000028 ORTHO05D003251 6.4e-10 67.8 114 35.1
Nitab4.5_0003289g0010 Nicotiana tabacum HOM05D000028 ORTHO05D003251 6.4e-10 67.8 100 38.0
Sp7g25990 Schrenkiella parvula HOM05D000028 ORTHO05D003251 6.4e-10 67.8 125 32.8
BcaB03g12554 Brassica carinata HOM05D000028 ORTHO05D003251 8.3e-10 67.4 125 33.6
BraA03t15042Z Brassica rapa HOM05D000028 ORTHO05D003251 8.3e-10 67.4 125 32.8
ECA234G1744 Erigeron canadensis HOM05D000028 ORTHO05D003251 8.3e-10 67.4 125 33.6
Medtr8g006090 Medicago truncatula HOM05D000028 ORTHO05D003251 8.3e-10 67.4 128 35.2
Sc18g0003300 Simmondsia chinensis HOM05D000028 ORTHO05D003251 8.3e-10 67.4 124 31.5
Aa31LG2G20100 Aethionema arabicum HOM05D000028 ORTHO05D003251 1.1e-09 67.0 126 34.9
CANSAT11G0325 Cannabis sativa HOM05D000028 ORTHO05D003251 1.1e-09 67.0 125 33.6
Sed0024522 Sechium edule HOM05D000028 ORTHO05D003251 1.1e-09 67.0 127 36.2
Aa31LG10G8600 Aethionema arabicum HOM05D000028 ORTHO05D003251 1.4e-09 66.6 125 33.6
BcaC09g50523 Brassica carinata HOM05D000028 ORTHO05D003251 1.4e-09 66.6 125 32.8
BcaNung01602 Brassica carinata HOM05D000028 ORTHO05D003251 1.4e-09 66.6 125 32.8
ECA234G1335 Erigeron canadensis HOM05D000028 ORTHO05D003251 1.4e-09 66.6 124 33.1
PGR042G2150 Punica granatum HOM05D000028 ORTHO05D003251 1.4e-09 66.6 132 32.6
TPR.G28927 Trifolium pratense HOM05D000028 ORTHO05D003251 1.4e-09 66.6 110 34.5
Aa31LG2G20110 Aethionema arabicum HOM05D000028 ORTHO05D003251 3.2e-09 65.5 115 34.8
EL10Ac8g18873 Beta vulgaris HOM05D000028 ORTHO05D003251 3.2e-09 65.5 125 32.0
CANSAT11G2451 Cannabis sativa HOM05D000028 ORTHO05D003251 3.2e-09 65.5 125 36.0
A01p19420 Brassica napus HOM05D000028 ORTHO05D003251 4.1e-09 65.1 125 33.6
BraA01t01882Z Brassica rapa HOM05D000028 ORTHO05D003251 4.1e-09 65.1 125 33.6
Nn8g40234 Nelumbo nucifera HOM05D000028 ORTHO05D003251 4.1e-09 65.1 121 29.8
AT4G28040 Arabidopsis thaliana HOM05D000028 ORTHO05D003251 5.4e-09 64.7 127 33.1
BolC1t02396H Brassica oleracea HOM05D000028 ORTHO05D003251 5.4e-09 64.7 125 33.6
C01p24470 Brassica napus HOM05D000028 ORTHO05D003251 7.1e-09 64.3 125 32.8
MELO3C004103.2 Cucumis melo HOM05D000028 ORTHO05D003251 7.1e-09 64.3 127 35.4
HanXRQChr10g0306511 Helianthus annuus HOM05D000028 ORTHO05D003251 7.1e-09 64.3 124 32.3
COL.COLO4_33995 Corchorus olitorius HOM05D000028 ORTHO05D003251 9.2e-09 63.9 120 34.2
CsaV3_2G007860 Cucumis sativus L. HOM05D000028 ORTHO05D003251 2.7e-08 62.4 127 34.6
AL7G24570 Arabidopsis lyrata HOM05D000028 ORTHO05D003251 3.5e-08 62.0 127 32.3
C01p08630 Brassica napus HOM05D000028 ORTHO05D003251 3.5e-08 62.0 114 36.0
CSS0002384 Camellia sinensis var. sinensis HOM05D000028 ORTHO05D003251 3.5e-08 62.0 111 34.2
THA.LOC104813266 Tarenaya hassleriana HOM05D000028 ORTHO05D406864 3.5e-08 62.0 123 35.0
Os09g0426500 Oryza sativa ssp. japonica HOM05D000028 ORTHO05D003251 7.8e-08 60.8 124 30.6
Sed0008435 Sechium edule HOM05D000028 ORTHO05D003251 1.0e-07 60.5 131 34.4
Lsat_1_v5_gn_5_87741 Lactuca sativa HOM05D000028 ORTHO05D003251 1.3e-07 60.1 124 33.1
SGA_v2.0_scaffold12G06042 Striga asiatica HOM05D000028 ORTHO05D003251 1.7e-07 59.7 115 34.8
PGR142G2382 Punica granatum HOM05D000028 ORTHO05D003251 3.9e-07 58.5 133 27.1
Sed0010095 Sechium edule HOM05D000028 ORTHO05D003251 5.1e-07 58.2 127 33.9
Sed0010181 Sechium edule HOM05D000028 ORTHO05D003251 8.6e-07 57.4 131 32.8
QL02p092993 Quercus lobata HOM05D000028 ORTHO05D003251 1.5e-06 56.6 116 32.8
HPP92_021951 Vanilla planifolia HOM05D000028 ORTHO05D003251 2.5e-06 55.8 123 32.5
BolC7t46248H Brassica oleracea HOM05D000028 ORTHO05D003251 3.3e-06 55.5 75 37.3
Glyma.06G123400 Glycine max HOM05D000028 ORTHO05D000390 4.3e-06 55.1 124 29.0
Atru.chr2.2444 Acer truncatum HOM05D000028 ORTHO05D003251 7.3e-06 54.3 73 41.1
BcaB04g19987 Brassica carinata HOM05D000028 ORTHO05D001176 9.5e-06 53.9 130 27.7
VMungo1309G2106 Vigna mungo HOM05D000028 ORTHO05D000390 9.5e-06 53.9 122 29.5


User provided reference genes

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