Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.0NEN23 Arachis hypogaea HOM05D005625 ORTHO05D007564 0.0e+00 1239.2 626 100.0
arahy.Tifrunner.gnm1.ann1.U40EKY Arachis hypogaea HOM05D005625 ORTHO05D007564 6.0e-289 997.3 599 87.3
arahy.Tifrunner.gnm1.ann1.I4CKLR Arachis hypogaea HOM05D005625 ORTHO05D007564 6.7e-256 887.5 594 80.1
arahy.Tifrunner.gnm1.ann1.23CDJN Arachis hypogaea HOM05D005625 ORTHO05D007564 1.6e-254 882.9 557 83.5
Phvul.006G130900 Phaseolus vulgaris HOM05D005625 ORTHO05D007564 4.1e-221 771.9 588 69.2
Lj6g0017830 Lotus japonicus HOM05D005625 ORTHO05D007564 2.9e-219 765.8 589 69.4
Glyma.09G021200 Glycine max HOM05D005625 ORTHO05D007564 1.9e-218 763.1 588 68.2
Medtr2g029250 Medicago truncatula HOM05D005625 ORTHO05D007564 9.4e-218 760.8 590 68.0
Lalb_Chr15g0088631 Lupinus albus HOM05D005625 ORTHO05D007564 1.2e-217 760.4 588 69.0
TPR.G17519 Trifolium pratense HOM05D005625 ORTHO05D007564 2.0e-212 743.0 590 66.6
Psat1g169440 Pisum sativum HOM05D005625 ORTHO05D007564 1.0e-208 730.7 612 63.6
VMungo0540G1936 Vigna mungo HOM05D005625 ORTHO05D007564 1.3e-198 697.2 615 62.0
CiPaw.04G063100 Carya illinoinensis HOM05D005625 ORTHO05D007564 2.4e-197 693.0 592 62.0
Cfa008087 Carpinus fangiana HOM05D005625 ORTHO05D007564 1.7e-195 686.8 586 62.6
Haze_13951 Corylus avellana HOM05D005625 ORTHO05D007564 5.0e-195 685.3 598 62.0
CSS0007097 Camellia sinensis var. sinensis HOM05D005625 ORTHO05D007564 2.8e-190 669.5 584 61.8
Prupe.1G544200 Prunus persica HOM05D005625 ORTHO05D007564 1.8e-189 666.8 594 59.8
QL09p002063 Quercus lobata HOM05D005625 ORTHO05D007564 1.6e-188 663.7 589 61.5
TAR381G1540 Trochodendron aralioides HOM05D005625 ORTHO05D007564 7.8e-188 661.4 584 60.8
Thecc.08G177300 Theobroma cacao HOM05D005625 ORTHO05D007564 8.6e-187 657.9 585 60.5
FvH4_5g33370 Fragaria vesca HOM05D005625 ORTHO05D007564 1.9e-186 656.8 592 59.5
RcHm_v2.0_Chr7g0232101 Rosa chinensis HOM05D005625 ORTHO05D007564 1.9e-186 656.8 592 60.0
FAN18G2766 Fragaria x ananassa HOM05D005625 ORTHO05D007564 2.5e-186 656.4 592 59.5
GSVIVG01036380001 Vitis vinifera HOM05D005625 ORTHO05D007564 3.3e-186 656.0 590 59.5
Manes.18G118300 Manihot esculenta HOM05D005625 ORTHO05D007564 9.5e-186 654.4 590 60.2
Gorai.013G133700 Gossypium raimondii HOM05D005625 ORTHO05D007564 1.6e-185 653.7 585 60.0
Rhsim02G0173300 Rhododendron simsii HOM05D005625 ORTHO05D007564 1.6e-185 653.7 593 59.5
Sc14g0005960 Simmondsia chinensis HOM05D005625 ORTHO05D007564 1.6e-185 653.7 581 60.6
Gohir.D13G119200 Gossypium hirsutum HOM05D005625 ORTHO05D007564 4.7e-185 652.1 581 60.2
Actinidia29383 Actinidia chinensis HOM05D005625 ORTHO05D007564 8.0e-185 651.4 598 59.2
CANSAT56G1751 Cannabis sativa HOM05D005625 ORTHO05D007564 8.0e-185 651.4 575 59.8
Gohir.A13G116000 Gossypium hirsutum HOM05D005625 ORTHO05D007564 8.0e-185 651.4 583 60.0
TWI18G0532 Tripterygium wilfordii HOM05D005625 ORTHO05D007564 8.0e-185 651.4 591 59.4
Ah.02g127420 Amaranthus hybridus HOM05D005625 ORTHO05D007564 4.0e-184 649.0 585 59.7
MD15G1395400 Malus domestica HOM05D005625 ORTHO05D007564 2.0e-183 646.7 584 58.7
Potri.019G072700 Populus trichocarpa HOM05D005625 ORTHO05D007564 4.4e-183 645.6 591 58.4
COL.COLO4_24882 Corchorus olitorius HOM05D005625 ORTHO05D007564 2.7e-180 636.3 593 57.8
Lj7C421T14 Lonicera japonica HOM05D005625 ORTHO05D007564 5.9e-180 635.2 584 57.5
Ciclev10014850m.g Citrus clementina HOM05D005625 ORTHO05D007564 1.3e-179 634.0 587 59.3
CsaV3_1G044090 Cucumis sativus L. HOM05D005625 ORTHO05D007564 5.0e-179 632.1 594 58.4
MELO3C011830.2 Cucumis melo HOM05D005625 ORTHO05D007564 6.6e-179 631.7 594 58.1
Sabra19G0084000 Salix brachista HOM05D005625 ORTHO05D007564 1.5e-178 630.6 609 55.8
FAN04G0928 Fragaria x ananassa HOM05D005625 ORTHO05D007564 2.5e-178 629.8 611 56.8
AUR62024898 Chenopodium quinoa HOM05D005625 ORTHO05D007564 7.3e-178 628.2 582 58.4
Migut.C01373 Erythranthe guttata HOM05D005625 ORTHO05D007564 6.2e-177 625.2 587 56.9
AUR62030641 Chenopodium quinoa HOM05D005625 ORTHO05D007564 8.0e-177 624.8 598 57.2
PGR044G1301 Punica granatum HOM05D005625 ORTHO05D007564 1.8e-176 623.6 583 56.9
Aqoxy5G00836 Aquilegia oxysepala HOM05D005625 ORTHO05D007564 5.2e-176 622.1 583 55.9
PSO017G2953 Papaver somniferum HOM05D005625 ORTHO05D007564 1.2e-175 620.9 580 55.3
Oeu028924.1 Olea europaea HOM05D005625 ORTHO05D007564 2.0e-175 620.2 604 56.6
MSTRG.25496 Avicennia marina HOM05D005625 ORTHO05D007564 5.8e-175 618.6 594 56.9
PSO170G6063 Papaver somniferum HOM05D005625 ORTHO05D007564 7.5e-175 618.2 580 55.5
MBI03_g28415_MAGBIO Magnolia biondii HOM05D005625 ORTHO05D007564 3.7e-174 615.9 598 55.2
Sopen11g018630 Solanum pennellii HOM05D005625 ORTHO05D007564 1.4e-173 614.0 590 56.1
Cc10_g08740 Coffea canephora HOM05D005625 ORTHO05D007564 1.2e-172 610.9 586 55.1
CAN.G990.6 Capsicum annuum HOM05D005625 ORTHO05D007564 2.0e-172 610.1 591 55.3
Ca_07151_v3 Cicer arietinum L. HOM05D005625 ORTHO05D007564 2.3e-171 606.7 589 57.9
DCAR_017431 Daucus carota HOM05D005625 ORTHO05D007564 6.6e-171 605.1 583 56.6
Carub.0002s1829 Capsella rubella HOM05D005625 ORTHO05D007564 2.5e-170 603.2 587 55.5
Sed0019265 Sechium edule HOM05D005625 ORTHO05D007564 2.8e-169 599.7 594 56.4
DCAR_006209 Daucus carota HOM05D005625 ORTHO05D007564 2.0e-167 593.6 582 56.0
ECA232G1187 Erigeron canadensis HOM05D005625 ORTHO05D007564 2.0e-167 593.6 578 55.0
EL10Ac6g14591 Beta vulgaris HOM05D005625 ORTHO05D007564 2.6e-167 593.2 644 51.7
AT1G71440 Arabidopsis thaliana HOM05D005625 ORTHO05D007564 2.9e-166 589.7 588 54.9
CARHR291240 Cardamine hirsuta HOM05D005625 ORTHO05D007564 3.7e-166 589.3 585 55.2
Eucgr.K01840 Eucalyptus grandis HOM05D005625 ORTHO05D007564 6.4e-166 588.6 593 55.1
AL2G31100 Arabidopsis lyrata HOM05D005625 ORTHO05D007564 1.4e-165 587.4 582 54.8
Ca_00793_v3 Cicer arietinum L. HOM05D005625 ORTHO05D007564 1.4e-165 587.4 589 56.5
Thhalv10018392m.g Eutrema salsugineum HOM05D005625 ORTHO05D007564 5.4e-165 585.5 585 55.0
HanXRQChr11g0326321 Helianthus annuus HOM05D005625 ORTHO05D007564 1.3e-163 580.9 584 52.9
THA.LOC104810982 Tarenaya hassleriana HOM05D005625 ORTHO05D007564 3.0e-163 579.7 588 54.4
Duzib177G0227 Durio zibethinus HOM05D005625 ORTHO05D007564 1.1e-160 571.2 587 54.9
Aa31LG4G9140 Aethionema arabicum HOM05D005625 ORTHO05D007564 3.1e-160 569.7 586 53.1
Lsat_1_v5_gn_2_82040 Lactuca sativa HOM05D005625 ORTHO05D007564 1.2e-159 567.8 592 51.9
Sp5g26600 Schrenkiella parvula HOM05D005625 ORTHO05D007564 4.4e-159 565.8 578 53.5
ATR1089G039 Amborella trichopoda HOM05D005625 ORTHO05D007564 2.2e-158 563.5 563 55.2
Dinv16108 Davidia involucrata HOM05D005625 ORTHO05D007564 3.2e-157 559.7 515 59.0
Zm00001eb233200 Zea mays HOM05D005625 ORTHO05D007564 5.6e-154 548.9 591 50.3
unitig_578.g16118 Utricularia gibba HOM05D005625 ORTHO05D007564 2.6e-151 540.0 598 50.8
SGA_v2.0_scaffold118G32606 Striga asiatica HOM05D005625 ORTHO05D007564 7.6e-151 538.5 600 51.0
HPP92_015711 Vanilla planifolia HOM05D005625 ORTHO05D007564 5.4e-149 532.3 583 49.6
BraA07t31336Z Brassica rapa HOM05D005625 ORTHO05D007564 2.3e-147 526.9 579 51.1
BolC6t39611H Brassica oleracea HOM05D005625 ORTHO05D007564 1.3e-145 521.2 580 50.7
A07p37730 Brassica napus HOM05D005625 ORTHO05D007564 4.8e-145 519.2 579 50.3
HPP92_026650 Vanilla planifolia HOM05D005625 ORTHO05D007564 1.4e-144 517.7 583 48.5
Cpa.g.sc21.80 Carica papaya HOM05D005625 ORTHO05D007564 1.2e-143 514.6 492 57.5
BcaC08g46580 Brassica carinata HOM05D005625 ORTHO05D007564 2.6e-143 513.5 576 49.7
Nn5g27281 Nelumbo nucifera HOM05D005625 ORTHO05D007564 3.3e-138 496.5 489 55.0
C06p45600 Brassica napus HOM05D005625 ORTHO05D007564 6.2e-137 492.3 579 48.5
Solyc11g042470.1 Solanum lycopersicum HOM05D005625 ORTHO05D007564 1.3e-126 458.0 474 52.7
Peaxi162Scf00078g00533 Petunia axillaris HOM05D005625 ORTHO05D007564 5.5e-125 452.6 455 52.5
SMO145G0237 Selaginella moellendorffii HOM05D005625 ORTHO05D007564 2.3e-123 447.2 582 43.5
vmacro11035 Vaccinium macrocarpon HOM05D005625 ORTHO05D007564 1.9e-122 444.1 601 46.1
Nitab4.5_0001155g0010 Nicotiana tabacum HOM05D005625 ORTHO05D007564 3.3e-122 443.4 450 53.8
Mapoly0057s0080 Marchantia polymorpha HOM05D005625 ORTHO05D007564 2.2e-121 440.7 600 43.0
Pp3c13_4420 Physcomitrium patens HOM05D005625 ORTHO05D007564 5.3e-112 409.5 593 40.6
SHI16719 Sapria himalayana HOM05D005625 ORTHO05D007564 5.2e-99 366.3 554 41.3
Sabra15G0066200 Salix brachista HOM05D005625 ORTHO05D007564 1.4e-96 358.2 413 50.6
Sabra15G0066000 Salix brachista HOM05D005625 ORTHO05D007564 5.3e-96 356.3 413 50.4
Atru.chr11.652 Acer truncatum HOM05D005625 ORTHO05D007564 1.3e-94 351.7 285 65.6
Pp3c9_6720 Physcomitrium patens HOM05D005625 ORTHO05D007564 6.5e-94 349.4 603 36.0
ClCG03G011780 Citrullus lanatus HOM05D005625 ORTHO05D007564 3.0e-91 340.5 287 62.4
AagrBONN_evm.TU.Sc2ySwM_344.4267 Anthoceros agrestis HOM05D005625 ORTHO05D007564 1.3e-86 325.1 506 38.7
CBR_g2823 Chara braunii HOM05D005625 ORTHO05D007564 8.9e-75 285.8 606 33.8
SEGI_17074 Sequoiadendron giganteum HOM05D005625 ORTHO05D007564 4.9e-73 280.0 284 54.2
FAN08G2869 Fragaria x ananassa HOM05D005625 ORTHO05D007564 4.3e-69 266.9 198 68.7
AagrBONN_evm.TU.Sc2ySwM_344.5166 Anthoceros agrestis HOM05D005625 ORTHO05D007564 3.5e-63 247.3 440 37.0
MCO15G211 Micromonas commoda HOM05D005625 ORTHO05D007564 6.4e-57 226.5 619 30.5
PGSC0003DMG400019987 Solanum tuberosum HOM05D005625 ORTHO05D007564 1.0e-54 219.2 167 67.1
ClCG03G011750 Citrullus lanatus HOM05D005625 ORTHO05D007564 1.5e-53 215.3 160 68.1
PRCOL_00002543 Prasinoderma coloniale HOM05D005625 ORTHO05D007564 1.9e-53 214.9 607 29.3
Nitab4.5_0000213g0250 Nicotiana tabacum HOM05D005625 ORTHO05D007564 2.8e-52 211.1 236 49.2
Cre02.g095113 Chlamydomonas reinhardtii HOM05D005625 ORTHO05D007564 6.0e-47 193.4 582 28.5
Os05g0105300 Oryza sativa ssp. japonica HOM05D005625 ORTHO05D007564 1.0e-46 192.6 173 53.8
Glyma.15G127567 Glycine max HOM05D005625 ORTHO05D007564 3.3e-45 187.6 138 68.8
Peaxi162Scf00078g00534 Petunia axillaris HOM05D005625 ORTHO05D007564 1.8e-43 181.8 131 68.7
Glyma.15G127633 Glycine max HOM05D005625 ORTHO05D007564 6.8e-43 179.9 159 58.5
Nitab4.5_0000213g0260 Nicotiana tabacum HOM05D005625 ORTHO05D007564 9.9e-42 176.0 126 69.0
arahy.Tifrunner.gnm1.ann1.6SNM9F Arachis hypogaea HOM05D005625 ORTHO05D007564 7.1e-32 143.3 132 62.9
Nitab4.5_0001155g0020 Nicotiana tabacum HOM05D005625 ORTHO05D007564 1.3e-30 139.0 113 61.9
Hund08558 Selenicereus undatus HOM05D005625 ORTHO05D007564 3.0e-30 137.9 86 77.9
BcaB04g17633 Brassica carinata HOM05D005625 ORTHO05D007564 1.1e-27 129.4 109 61.5
Solyc11g042500.3 Solanum lycopersicum HOM05D005625 ORTHO05D007564 9.0e-27 126.3 91 70.3
arahy.Tifrunner.gnm1.ann1.GWKT0Q Arachis hypogaea HOM05D005625 ORTHO05D007564 8.4e-25 119.8 134 54.5
TPR.G26547 Trifolium pratense HOM05D005625 ORTHO05D022022 3.5e-23 114.4 83 66.3
arahy.Tifrunner.gnm1.ann1.QJV3PU Arachis hypogaea HOM05D003356 ORTHO05D086117 9.9e-18 96.3 95 62.1
C02p28970 Brassica napus HOM05D005625 ORTHO05D022022 2.5e-16 91.7 98 50.0
A02p17310 Brassica napus HOM05D005625 ORTHO05D022022 4.2e-16 90.9 155 37.4
BraA02t06779Z Brassica rapa HOM05D005625 ORTHO05D022022 4.2e-16 90.9 155 37.4
BolC2t08946H Brassica oleracea HOM05D005625 ORTHO05D022022 1.2e-15 89.4 74 58.1
Cfa026593 Carpinus fangiana HOM05D005625 ORTHO05D007564 4.6e-15 87.4 511 23.9
arahy.Tifrunner.gnm1.ann1.P90V4Z Arachis hypogaea HOM05D002479 ORTHO05D002675 1.0e-14 86.3 58 75.9
arahy.Tifrunner.gnm1.ann1.K92JXF Arachis hypogaea HOM05D002479 ORTHO05D002675 3.9e-14 84.3 90 57.8
arahy.Tifrunner.gnm1.ann1.CUF5YV Arachis hypogaea HOM05D002479 ORTHO05D002675 8.7e-14 83.2 90 57.8
Dinv01391 Davidia involucrata HOM05D002479 ORTHO05D002675 1.4e-11 75.9 42 85.7
PSO478G1928 Papaver somniferum HOM05D005625 ORTHO05D002418 4.2e-08 64.3 68 50.0
ClCG03G011760 Citrullus lanatus HOM05D000004 ORTHO05D000002 7.1e-08 63.5 126 37.3
AagrBONN_evm.TU.Sc2ySwM_368.1004 Anthoceros agrestis HOM05D016773 ORTHO05D019668 7.9e-07 60.1 263 25.1
arahy.Tifrunner.gnm1.ann1.E660H8 Arachis hypogaea HOM05D005625 ORTHO05D007564 2.3e-06 58.5 32 87.5
arahy.Tifrunner.gnm1.ann1.KG76U8 Arachis hypogaea HOM05D005625 ORTHO05D007564 2.3e-06 58.5 32 87.5
Cpa.g.c47759 Carica papaya HOM05D005625 ORTHO05D007564 3.0e-06 58.2 49 59.2


User provided reference genes

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