Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.0M423A Arachis hypogaea HOM05D005769 ORTHO05D006851 1.1e-105 386.7 199 100.0
Ca_06306_v3 Cicer arietinum L. HOM05D005769 ORTHO05D006851 3.7e-34 149.1 180 53.3
LjContig00351g0007061 Lotus japonicus HOM05D005769 ORTHO05D006851 8.3e-34 147.9 177 54.2
Glyma.14G025400 Glycine max HOM05D005769 ORTHO05D006851 3.1e-33 146.0 172 54.1
Lalb_Chr04g0248581 Lupinus albus HOM05D005769 ORTHO05D006851 5.4e-33 145.2 172 50.0
arahy.Tifrunner.gnm1.ann1.B7V00M Arachis hypogaea HOM05D005769 ORTHO05D006851 7.0e-33 144.8 172 52.3
Medtr5g092090 Medicago truncatula HOM05D005769 ORTHO05D006851 1.6e-32 143.7 173 52.6
Lj4g0016834 Lotus japonicus HOM05D005769 ORTHO05D006851 7.7e-32 141.4 177 52.5
Phvul.008G265600 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 1.7e-31 140.2 172 51.7
Thecc.07G043800 Theobroma cacao HOM05D005769 ORTHO05D006851 1.7e-31 140.2 163 54.6
arahy.Tifrunner.gnm1.ann1.B9FWIC Arachis hypogaea HOM05D005769 ORTHO05D006851 2.9e-31 139.4 172 50.6
VMungo0647G1996 Vigna mungo HOM05D005769 ORTHO05D006851 2.9e-31 139.4 177 50.8
Duzib170G0312 Durio zibethinus HOM05D005769 ORTHO05D006851 6.5e-31 138.3 162 53.7
Lj6g0021335 Lotus japonicus HOM05D005769 ORTHO05D006851 6.5e-31 138.3 170 53.5
Haze_09647 Corylus avellana HOM05D005769 ORTHO05D006851 1.5e-30 137.1 159 54.7
VMungo0540G0361 Vigna mungo HOM05D005769 ORTHO05D006851 2.5e-30 136.3 168 53.6
Ciclev10010329m.g Citrus clementina HOM05D005769 ORTHO05D006851 4.2e-30 135.6 162 52.5
Glyma.18G101700 Glycine max HOM05D005769 ORTHO05D006851 9.5e-30 134.4 163 51.5
QL08p011874 Quercus lobata HOM05D005769 ORTHO05D006851 2.1e-29 133.3 163 53.4
Cfa020385 Carpinus fangiana HOM05D005769 ORTHO05D006851 2.8e-29 132.9 159 54.1
QL08p012043 Quercus lobata HOM05D005769 ORTHO05D006851 8.0e-29 131.3 163 52.1
Duzib213G1024 Durio zibethinus HOM05D005769 ORTHO05D006851 1.0e-28 131.0 163 54.6
Glyma.09G100100 Glycine max HOM05D005769 ORTHO05D006851 1.0e-28 131.0 166 49.4
Manes.03G126700 Manihot esculenta HOM05D005769 ORTHO05D006851 1.8e-28 130.2 156 50.0
MD11G1222100 Malus domestica HOM05D005769 ORTHO05D006851 2.3e-28 129.8 162 51.2
Atru.chr2.3278 Acer truncatum HOM05D005769 ORTHO05D006851 4.0e-28 129.0 167 47.3
Dinv40735 Davidia involucrata HOM05D005769 ORTHO05D006851 1.2e-27 127.5 162 50.0
Glyma.02G289500 Glycine max HOM05D005769 ORTHO05D006851 1.2e-27 127.5 174 48.9
Gorai.002G086700 Gossypium raimondii HOM05D005769 ORTHO05D006851 1.2e-27 127.5 164 50.0
TWI38G1097 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 1.2e-27 127.5 158 50.6
FvH4_3g22210 Fragaria vesca HOM05D005769 ORTHO05D006851 2.0e-27 126.7 165 47.3
FAN11G0604 Fragaria x ananassa HOM05D005769 ORTHO05D006851 2.0e-27 126.7 165 47.3
FAN16G0333 Fragaria x ananassa HOM05D005769 ORTHO05D006851 2.0e-27 126.7 165 47.3
Gohir.D01G065000 Gossypium hirsutum HOM05D005769 ORTHO05D006851 2.0e-27 126.7 162 50.6
COL.COLO4_09632 Corchorus olitorius HOM05D005769 ORTHO05D006851 3.4e-27 125.9 164 51.2
Potri.001G421000 Populus trichocarpa HOM05D005769 ORTHO05D006851 4.4e-27 125.6 159 48.4
CiPaw.11G187200 Carya illinoinensis HOM05D005769 ORTHO05D006851 5.7e-27 125.2 159 52.2
CiPaw.12G128000 Carya illinoinensis HOM05D005769 ORTHO05D006851 5.7e-27 125.2 164 51.2
FAN21G0668 Fragaria x ananassa HOM05D005769 ORTHO05D006851 5.7e-27 125.2 165 47.3
FAN25G3736 Fragaria x ananassa HOM05D005769 ORTHO05D006851 5.7e-27 125.2 165 46.7
Prupe.4G209200 Prunus persica HOM05D005769 ORTHO05D006851 5.7e-27 125.2 162 50.6
RcHm_v2.0_Chr5g0038281 Rosa chinensis HOM05D005769 ORTHO05D006851 5.7e-27 125.2 165 48.5
Cpa.g.sc97.35 Carica papaya HOM05D005769 ORTHO05D006851 3.7e-26 122.5 156 50.6
Phvul.006G038800 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 8.3e-26 121.3 166 53.0
Rhsim04G0001000 Rhododendron simsii HOM05D005769 ORTHO05D006851 8.3e-26 121.3 163 47.9
Rhsim04G0002100 Rhododendron simsii HOM05D005769 ORTHO05D006851 1.1e-25 120.9 163 47.2
Nn1g03582 Nelumbo nucifera HOM05D005769 ORTHO05D006851 1.4e-25 120.6 168 48.8
Gohir.A01G077900 Gossypium hirsutum HOM05D005769 ORTHO05D006851 3.1e-25 119.4 163 48.5
Gorai.009G425000 Gossypium raimondii HOM05D005769 ORTHO05D006851 5.4e-25 118.6 155 51.0
TWI39G0743 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 5.4e-25 118.6 163 46.6
Aqoxy1G03294 Aquilegia oxysepala HOM05D005769 ORTHO05D006851 7.0e-25 118.2 173 47.4
Gohir.A04G019100 Gossypium hirsutum HOM05D005769 ORTHO05D006851 7.0e-25 118.2 170 48.2
Gohir.D05G366600 Gossypium hirsutum HOM05D005769 ORTHO05D006851 9.2e-25 117.9 155 51.0
CANSAT21G1553 Cannabis sativa HOM05D005769 ORTHO05D006851 1.2e-24 117.5 159 49.1
Sabra16G0285900 Salix brachista HOM05D005769 ORTHO05D006851 1.6e-24 117.1 158 48.1
Psat2g015240 Pisum sativum HOM05D005769 ORTHO05D006851 7.8e-24 114.8 181 44.8
TAR626G0147 Trochodendron aralioides HOM05D005769 ORTHO05D006851 1.7e-23 113.6 164 45.1
Potri.011G136600 Populus trichocarpa HOM05D005769 ORTHO05D006851 2.3e-23 113.2 157 43.9
Hma1.2p1_1271F.1_g271830 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 3.8e-23 112.5 161 45.3
Hma1.2p1_1609F.1_g293426 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 3.8e-23 112.5 161 45.3
Manes.15G073700 Manihot esculenta HOM05D005769 ORTHO05D006851 6.6e-23 111.7 161 47.2
unitig_0.g2389 Utricularia gibba HOM05D005769 ORTHO05D006851 1.1e-22 110.9 169 45.0
Nitab4.5_0000397g0340 Nicotiana tabacum HOM05D005769 ORTHO05D006851 2.8e-21 106.3 157 42.0
PGR031G3409 Punica granatum HOM05D005769 ORTHO05D006851 3.6e-21 105.9 159 44.0
THA.LOC104813420 Tarenaya hassleriana HOM05D005769 ORTHO05D006851 3.6e-21 105.9 155 44.5
Lj8E167T2 Lonicera japonica HOM05D005769 ORTHO05D006851 6.1e-21 105.1 161 45.3
Oeu005460.1 Olea europaea HOM05D005769 ORTHO05D006851 2.3e-20 103.2 163 40.5
Nitab4.5_0000653g0070 Nicotiana tabacum HOM05D005769 ORTHO05D006851 6.8e-20 101.7 159 41.5
MSTRG.6907 Avicennia marina HOM05D005769 ORTHO05D006851 8.9e-20 101.3 163 39.3
CAN.G337.106 Capsicum annuum HOM05D005769 ORTHO05D006851 8.9e-20 101.3 164 42.1
Sed0023999 Sechium edule HOM05D005769 ORTHO05D006851 1.2e-19 100.9 162 38.9
PSO675G2145 Papaver somniferum HOM05D005769 ORTHO05D006851 2.6e-19 99.8 170 38.2
PGSC0003DMG400014393 Solanum tuberosum HOM05D005769 ORTHO05D006851 3.4e-19 99.4 171 39.8
PSO541G5959 Papaver somniferum HOM05D005769 ORTHO05D006851 5.7e-19 98.6 172 40.7
Nitab4.5_0000749g0110 Nicotiana tabacum HOM05D005769 ORTHO05D006851 7.5e-19 98.2 160 42.5
ClCG05G014450 Citrullus lanatus HOM05D005769 ORTHO05D006851 9.8e-19 97.8 164 39.0
Peaxi162Scf01097g00025 Petunia axillaris HOM05D005769 ORTHO05D006851 1.3e-18 97.4 152 38.8
Nitab4.5_0013016g0010 Nicotiana tabacum HOM05D005769 ORTHO05D006851 1.7e-18 97.1 155 37.4
Peaxi162Scf00450g00084 Petunia axillaris HOM05D005769 ORTHO05D006851 2.2e-18 96.7 156 41.7
Solyc07g064320.3 Solanum lycopersicum HOM05D005769 ORTHO05D006851 2.2e-18 96.7 160 39.4
Lj1P869T51 Lonicera japonica HOM05D005769 ORTHO05D006851 3.7e-18 95.9 164 42.7
Sopen10g002310 Solanum pennellii HOM05D005769 ORTHO05D006851 3.7e-18 95.9 171 39.2
PSO832G0238 Papaver somniferum HOM05D005769 ORTHO05D006851 6.4e-18 95.1 165 40.0
Solyc10g006360.2 Solanum lycopersicum HOM05D005769 ORTHO05D006851 6.4e-18 95.1 171 39.2
Cc05_g13510 Coffea canephora HOM05D005769 ORTHO05D006851 8.3e-18 94.7 157 40.1
PGSC0003DMG400013920 Solanum tuberosum HOM05D005769 ORTHO05D006851 1.1e-17 94.4 160 39.4
Sopen07g032470 Solanum pennellii HOM05D005769 ORTHO05D006851 1.4e-17 94.0 160 38.8
PGSC0003DMG400001093 Solanum tuberosum HOM05D005769 ORTHO05D006851 1.4e-17 94.0 168 40.5
AL8G30290 Arabidopsis lyrata HOM05D005769 ORTHO05D006851 2.0e-16 90.1 195 33.8
Sed0008399 Sechium edule HOM05D005769 ORTHO05D006851 3.5e-16 89.4 155 36.8
Aa31LG3G10760 Aethionema arabicum HOM05D005769 ORTHO05D006851 7.8e-16 88.2 155 36.1
AT5G54850 Arabidopsis thaliana HOM05D005769 ORTHO05D006851 7.8e-16 88.2 196 33.2
AUR62015707 Chenopodium quinoa HOM05D005769 ORTHO05D006851 7.8e-16 88.2 164 39.6
Actinidia09713 Actinidia chinensis HOM05D005769 ORTHO05D006851 3.0e-15 86.3 162 39.5
ECA236G2121 Erigeron canadensis HOM05D005769 ORTHO05D006851 3.9e-15 85.9 173 34.7
CSS0032413 Camellia sinensis var. sinensis HOM05D005769 ORTHO05D006851 5.0e-15 85.5 146 38.4
MELO3C018076.2 Cucumis melo HOM05D005769 ORTHO05D006851 8.6e-15 84.7 168 38.7
CsaV3_3G023280 Cucumis sativus L. HOM05D005769 ORTHO05D006851 8.6e-15 84.7 166 37.3
SalBow7G1695 Salvia bowleyana HOM05D005769 ORTHO05D006851 8.6e-15 84.7 167 41.9
Migut.M01783 Erythranthe guttata HOM05D005769 ORTHO05D006851 1.1e-14 84.3 160 36.9
Migut.H01842 Erythranthe guttata HOM05D005769 ORTHO05D006851 1.5e-14 84.0 170 40.6
AUR62020499 Chenopodium quinoa HOM05D005769 ORTHO05D006851 2.5e-14 83.2 167 36.5
BcaC04g20292 Brassica carinata HOM05D005769 ORTHO05D006851 3.3e-14 82.8 185 35.7
BolC9t57410H Brassica oleracea HOM05D005769 ORTHO05D006851 3.3e-14 82.8 185 35.7
C09p45400 Brassica napus HOM05D005769 ORTHO05D006851 5.6e-14 82.0 183 35.5
BraA10t43314Z Brassica rapa HOM05D005769 ORTHO05D006851 5.6e-14 82.0 183 35.5
HanXRQChr11g0336271 Helianthus annuus HOM05D005769 ORTHO05D006851 5.6e-14 82.0 163 34.4
BcaB08g35851 Brassica carinata HOM05D005769 ORTHO05D006851 9.5e-14 81.3 180 33.9
ECA234G1543 Erigeron canadensis HOM05D005769 ORTHO05D006851 9.5e-14 81.3 161 34.2
Hma1.2p1_0328F.1_g126860 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 1.2e-13 80.9 152 34.2
Oeu062604.3 Olea europaea HOM05D005769 ORTHO05D006851 1.6e-13 80.5 150 40.7
CARHR268180 Cardamine hirsuta HOM05D005769 ORTHO05D006851 2.1e-13 80.1 175 30.9
Thhalv10014809m.g Eutrema salsugineum HOM05D005769 ORTHO05D006851 2.1e-13 80.1 174 32.8
Hma1.2p1_1748F.1_g300680 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 2.8e-13 79.7 151 33.8
MBI18_g09843_MAGBIO Magnolia biondii HOM05D005769 ORTHO05D006851 3.6e-13 79.3 129 45.0
Carub.0008s1514 Capsella rubella HOM05D005769 ORTHO05D006851 8.0e-13 78.2 172 32.6
A10p12180 Brassica napus HOM05D005769 ORTHO05D006851 1.8e-12 77.0 210 31.9
Sp6g16810 Schrenkiella parvula HOM05D005769 ORTHO05D006851 1.8e-12 77.0 179 33.0
Lalb_Chr10g0106921 Lupinus albus HOM05D005769 ORTHO05D006851 2.3e-12 76.6 126 46.8
Sc16g0006260 Simmondsia chinensis HOM05D005769 ORTHO05D006851 3.1e-12 76.3 210 34.3
SGA_v2.0_scaffold8G04301 Striga asiatica HOM05D005769 ORTHO05D006851 6.8e-12 75.1 162 37.7
Oeu042920.1 Olea europaea HOM05D005249 ORTHO05D006457 3.4e-11 72.8 137 36.5
Lsat_1_v5_gn_5_125321 Lactuca sativa HOM05D005769 ORTHO05D006851 5.8e-11 72.0 144 31.9
Cc05_g04810 Coffea canephora HOM05D005769 ORTHO05D006851 9.8e-11 71.2 155 33.5
CDE02G4799 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 2.9e-10 69.7 153 32.7
Zm00001eb322840 Zea mays HOM05D005769 ORTHO05D006851 2.9e-10 69.7 160 35.6
ATR0752G130 Amborella trichopoda HOM05D005769 ORTHO05D006851 4.9e-10 68.9 182 34.1
HPP92_014114 Vanilla planifolia HOM05D005769 ORTHO05D006851 1.9e-09 67.0 159 36.5
Ah.04g165680 Amaranthus hybridus HOM05D005769 ORTHO05D006851 2.4e-09 66.6 181 32.0
HanXRQChr05g0159131 Helianthus annuus HOM05D005769 ORTHO05D006851 9.2e-09 64.7 150 36.0
HPP92_012322 Vanilla planifolia HOM05D005769 ORTHO05D006851 8.6e-07 58.2 144 36.1
HPP92_012395 Vanilla planifolia HOM05D005769 ORTHO05D006851 8.6e-07 58.2 144 35.4


User provided reference genes

Program Settings