Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.0KI29H Arachis hypogaea HOM05D008314 ORTHO05D010369 1.6e-49 199.1 100 100.0
arahy.Tifrunner.gnm1.ann1.K03VIU Arachis hypogaea HOM05D008314 ORTHO05D010369 3.9e-48 194.5 100 97.0
Lalb_Chr17g0343301 Lupinus albus HOM05D008314 ORTHO05D010369 6.2e-14 80.9 78 51.3
Glyma.16G013200 Glycine max HOM05D008314 ORTHO05D010369 1.4e-13 79.7 82 56.1
Phvul.010G123800 Phaseolus vulgaris HOM05D008314 ORTHO05D010369 6.9e-13 77.4 88 51.1
Prupe.3G031600 Prunus persica HOM05D008314 ORTHO05D010369 9.0e-13 77.0 98 45.9
RcHm_v2.0_Chr2g0147741 Rosa chinensis HOM05D008314 ORTHO05D010369 9.0e-13 77.0 97 43.3
Medtr8g022990 Medicago truncatula HOM05D008314 ORTHO05D010369 2.0e-12 75.9 86 51.2
FvH4_6g35740 Fragaria vesca HOM05D008314 ORTHO05D010369 1.7e-11 72.8 100 44.0
FAN09G4263 Fragaria x ananassa HOM05D008314 ORTHO05D010369 1.7e-11 72.8 100 44.0
CSS0041009 Camellia sinensis var. sinensis HOM05D008314 ORTHO05D010369 2.2e-11 72.4 88 45.5
FAN05G1710 Fragaria x ananassa HOM05D008314 ORTHO05D010369 1.4e-10 69.7 100 42.0
Cc04_g00790 Coffea canephora HOM05D008314 ORTHO05D010369 3.2e-10 68.6 79 46.8
Manes.11G013300 Manihot esculenta HOM05D008314 ORTHO05D010369 7.1e-10 67.4 85 47.1
Rhsim12G0213100 Rhododendron simsii HOM05D008314 ORTHO05D010369 1.2e-09 66.6 90 43.3
QL05p001376 Quercus lobata HOM05D008314 ORTHO05D010369 1.6e-09 66.2 88 43.2
CiPaw.01G212000 Carya illinoinensis HOM05D008314 ORTHO05D010369 2.7e-09 65.5 91 40.7
Oeu059021.1 Olea europaea HOM05D008314 ORTHO05D010369 2.7e-09 65.5 87 41.4
Thecc.06G129300 Theobroma cacao HOM05D008314 ORTHO05D010369 2.7e-09 65.5 88 42.0
Dinv37824 Davidia involucrata HOM05D008314 ORTHO05D010369 4.6e-09 64.7 87 46.0
Thecc.03G325500 Theobroma cacao HOM05D008314 ORTHO05D010369 7.9e-09 63.9 88 42.0
Atru.chr1.4110 Acer truncatum HOM05D008314 ORTHO05D010369 1.0e-08 63.5 92 42.4
Gorai.010G173500 Gossypium raimondii HOM05D008314 ORTHO05D010369 1.0e-08 63.5 83 45.8
FAN02G2954 Fragaria x ananassa HOM05D008314 ORTHO05D010369 1.3e-08 63.2 100 39.0
Oeu008398.2 Olea europaea HOM05D008314 ORTHO05D010369 2.3e-08 62.4 87 42.5
Rhsim08G0244000 Rhododendron simsii HOM05D008314 ORTHO05D010369 3.0e-08 62.0 103 39.8
Potri.003G072000 Populus trichocarpa HOM05D008314 ORTHO05D010369 3.9e-08 61.6 89 37.1
Duzib235G1505 Durio zibethinus HOM05D008314 ORTHO05D010369 5.1e-08 61.2 90 37.8
Duzib160G0115 Durio zibethinus HOM05D008314 ORTHO05D010369 6.7e-08 60.8 74 40.5
PSO135G0082 Papaver somniferum HOM05D008314 ORTHO05D010369 8.7e-08 60.5 86 41.9
Psat4g165800 Pisum sativum HOM05D008314 ORTHO05D010369 8.7e-08 60.5 44 72.7
SalBow6G0833 Salvia bowleyana HOM05D008314 ORTHO05D010369 8.7e-08 60.5 82 42.7
Sed0005090 Sechium edule HOM05D008314 ORTHO05D010369 8.7e-08 60.5 74 41.9
Cpa.g.sc25.184 Carica papaya HOM05D008314 ORTHO05D010369 1.1e-07 60.1 95 37.9
Gohir.D06G149000 Gossypium hirsutum HOM05D008314 ORTHO05D010369 1.1e-07 60.1 79 41.8
PSO724G1385 Papaver somniferum HOM05D008314 ORTHO05D010369 1.1e-07 60.1 87 40.2
TWI14G0587 Tripterygium wilfordii HOM05D008314 ORTHO05D010369 1.5e-07 59.7 76 43.4
TAR070G0001 Trochodendron aralioides HOM05D008314 ORTHO05D010369 1.9e-07 59.3 74 41.9
Actinidia24433 Actinidia chinensis HOM05D008314 ORTHO05D010369 2.5e-07 58.9 89 40.4
MBI13_g01687_MAGBIO Magnolia biondii HOM05D008314 ORTHO05D010369 2.5e-07 58.9 59 50.8
MELO3C024311.2 Cucumis melo HOM05D008314 ORTHO05D010369 3.3e-07 58.5 90 36.7
Nn6g35721 Nelumbo nucifera HOM05D008314 ORTHO05D010369 4.3e-07 58.2 93 38.7
AUR62001414 Chenopodium quinoa HOM05D008314 ORTHO05D010369 5.7e-07 57.8 91 37.4
COL.COLO4_30857 Corchorus olitorius HOM05D008314 ORTHO05D010369 5.7e-07 57.8 58 46.6
Gohir.A06G143350 Gossypium hirsutum HOM05D008314 ORTHO05D010369 1.3e-06 56.6 81 43.2
ATR0099G003 Amborella trichopoda HOM05D008314 ORTHO05D010369 1.6e-06 56.2 93 34.4
AUR62025623 Chenopodium quinoa HOM05D008314 ORTHO05D010369 2.1e-06 55.8 42 59.5
Os02g0564600 Oryza sativa ssp. japonica HOM05D008314 ORTHO05D010369 3.7e-06 55.1 36 66.7
Zm00001eb019440 Zea mays HOM05D008314 ORTHO05D010369 3.7e-06 55.1 82 42.7
SEGI_28829 Sequoiadendron giganteum HOM05D008314 ORTHO05D010369 4.8e-06 54.7 58 44.8
Ciclev10027008m.g Citrus clementina HOM05D008314 ORTHO05D010369 8.2e-06 53.9 88 39.8
CsaV3_7G033990 Cucumis sativus L. HOM05D008314 ORTHO05D010369 8.2e-06 53.9 71 38.0


User provided reference genes

Program Settings