Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.0IEE1K Arachis hypogaea HOM05D000023 ORTHO05D012305 2.0e-71 272.7 181 100.0
arahy.Tifrunner.gnm1.ann1.WBP0IL Arachis hypogaea HOM05D000023 ORTHO05D012305 4.1e-40 168.7 199 56.3
arahy.Tifrunner.gnm1.ann1.YG44LD Arachis hypogaea HOM05D000023 ORTHO05D000014 2.6e-34 149.4 117 80.3
arahy.Tifrunner.gnm1.ann1.JID8JB Arachis hypogaea HOM05D000023 ORTHO05D000014 5.2e-27 125.2 94 66.0
arahy.Tifrunner.gnm1.ann1.4ZUM9H Arachis hypogaea HOM05D000023 ORTHO05D012305 8.3e-25 117.9 94 78.7
arahy.Tifrunner.gnm1.ann1.KXE035 Arachis hypogaea HOM05D000023 ORTHO05D012305 6.0e-23 111.7 227 41.0
arahy.Tifrunner.gnm1.ann1.0X5JTE Arachis hypogaea HOM05D000023 ORTHO05D012305 2.3e-22 109.8 94 66.0
arahy.Tifrunner.gnm1.ann1.M7P743 Arachis hypogaea HOM05D000023 ORTHO05D000014 4.3e-21 105.5 99 52.5
arahy.Tifrunner.gnm1.ann1.13TSAR Arachis hypogaea HOM05D000023 ORTHO05D000014 7.3e-21 104.8 53 81.1
arahy.Tifrunner.gnm1.ann1.E6QW8T Arachis hypogaea HOM05D000023 ORTHO05D012305 9.5e-21 104.4 99 52.5
arahy.Tifrunner.gnm1.ann1.8A1SVZ Arachis hypogaea HOM05D000023 ORTHO05D012305 7.8e-15 84.7 113 46.0
THA.LOC104804899 Tarenaya hassleriana HOM05D000023 ORTHO05D000014 7.3e-13 78.2 47 70.2
Glyma.17G215100 Glycine max HOM05D000023 ORTHO05D000014 9.6e-13 77.8 54 63.0
Glyma.01G121600 Glycine max HOM05D000023 ORTHO05D000014 4.7e-12 75.5 47 63.8
Glyma.06G230700 Glycine max HOM05D000023 ORTHO05D000014 4.7e-12 75.5 47 63.8
Glyma.09G104100 Glycine max HOM05D000023 ORTHO05D000014 4.7e-12 75.5 48 60.4
Glyma.12G152900 Glycine max HOM05D000023 ORTHO05D000014 4.7e-12 75.5 47 63.8
Glyma.13G192700 Glycine max HOM05D000023 ORTHO05D000014 4.7e-12 75.5 47 63.8
Glyma.14G162700 Glycine max HOM05D000023 ORTHO05D000014 4.7e-12 75.5 47 63.8
Glyma.18G099100 Glycine max HOM05D000023 ORTHO05D000014 4.7e-12 75.5 47 63.8
Glyma.20G072800 Glycine max HOM05D000023 ORTHO05D000014 4.7e-12 75.5 47 63.8
Glyma.02G159600 Glycine max HOM05D000023 ORTHO05D000014 6.2e-12 75.1 45 66.7
Glyma.08G294500 Glycine max HOM05D000023 ORTHO05D000014 6.2e-12 75.1 47 63.8
Glyma.10G121900 Glycine max HOM05D000023 ORTHO05D000014 8.1e-12 74.7 47 63.8
Glyma.19G102600 Glycine max HOM05D000023 ORTHO05D000014 3.1e-11 72.8 47 61.7
Lj1g0008556 Lotus japonicus HOM05D000023 ORTHO05D000014 3.1e-11 72.8 50 64.0
Glyma.20G074600 Glycine max HOM05D000023 ORTHO05D000014 4.0e-11 72.4 47 61.7
Glyma.04G163700 Glycine max HOM05D000023 ORTHO05D000014 5.2e-11 72.0 54 61.1
Lj4g0005907 Lotus japonicus HOM05D000023 ORTHO05D000014 5.2e-11 72.0 47 61.7
Lj5g0017561 Lotus japonicus HOM05D000023 ORTHO05D000014 5.2e-11 72.0 47 61.7
Glyma.07G163900 Glycine max HOM05D000023 ORTHO05D000014 4.4e-10 68.9 47 59.6
Lj1g0014944 Lotus japonicus HOM05D000023 ORTHO05D000014 9.9e-10 67.8 47 59.6
LjContig00408g0010617 Lotus japonicus HOM05D000023 ORTHO05D012305 2.2e-09 66.6 47 57.4
Glyma.09G000200 Glycine max HOM05D000023 ORTHO05D000014 3.8e-09 65.9 47 57.4
Glyma.09G064900 Glycine max HOM05D000023 ORTHO05D000014 8.4e-09 64.7 47 57.4
arahy.Tifrunner.gnm1.ann1.J91AZ5 Arachis hypogaea HOM05D000023 ORTHO05D012305 1.9e-08 63.5 94 43.6
Lj2g0024203 Lotus japonicus HOM05D000023 ORTHO05D000014 2.4e-08 63.2 47 51.1
Glyma.16G099000 Glycine max HOM05D000023 ORTHO05D000014 3.2e-08 62.8 47 55.3
Glyma.15G205800 Glycine max HOM05D000023 ORTHO05D000014 4.2e-08 62.4 47 55.3
arahy.Tifrunner.gnm1.ann1.ITYS0U Arachis hypogaea HOM05D000023 ORTHO05D012305 7.1e-08 61.6 138 37.0
arahy.Tifrunner.gnm1.ann1.LFZ5KZ Arachis hypogaea HOM05D000176 ORTHO05D000106 9.3e-08 61.2 66 53.0
arahy.Tifrunner.gnm1.ann1.2SE7CV Arachis hypogaea HOM05D000023 ORTHO05D012305 2.7e-07 59.7 29 89.7
Nn1g01508 Nelumbo nucifera HOM05D000023 ORTHO05D012305 3.5e-07 59.3 49 51.0
Glyma.03G080400 Glycine max HOM05D000023 ORTHO05D000014 4.6e-07 58.9 34 70.6
Glyma.04G117600 Glycine max HOM05D000023 ORTHO05D000014 4.6e-07 58.9 34 70.6
Nn2g14678 Nelumbo nucifera HOM05D000023 ORTHO05D000014 7.8e-07 58.2 50 50.0
MSTRG.23368 Avicennia marina HOM05D000023 ORTHO05D000014 1.7e-06 57.0 45 51.1
CSS0005925 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 3.0e-06 56.2 42 50.0


User provided reference genes

Program Settings