Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.0GR2GF Arachis hypogaea HOM05D006148 ORTHO05D007955 2.1e-95 352.4 193 100.0
arahy.Tifrunner.gnm1.ann1.L2DS42 Arachis hypogaea HOM05D006148 ORTHO05D007955 4.8e-95 351.3 193 99.5
Lalb_Chr15g0078661 Lupinus albus HOM05D006148 ORTHO05D007955 6.5e-52 208.0 195 59.5
Lalb_Chr18g0047251 Lupinus albus HOM05D006148 ORTHO05D007955 3.6e-50 202.2 193 57.0
Psat5g091640 Pisum sativum HOM05D006148 ORTHO05D007955 1.4e-46 190.3 162 63.0
Medtr3g086600 Medicago truncatula HOM05D006148 ORTHO05D007955 9.1e-46 187.6 160 62.5
Ca_20510_v3 Cicer arietinum L. HOM05D006148 ORTHO05D007955 2.2e-44 183.0 145 66.2
Phvul.010G018500 Phaseolus vulgaris HOM05D006148 ORTHO05D007955 1.5e-43 180.3 193 52.3
Glyma.16G092500 Glycine max HOM05D006148 ORTHO05D007955 3.2e-43 179.1 146 63.0
TPR.G30538 Trifolium pratense HOM05D006148 ORTHO05D007955 3.2e-43 179.1 168 58.9
VMungo0331G0425 Vigna mungo HOM05D006148 ORTHO05D007955 1.5e-40 170.2 146 61.0
SGA_v2.0_scaffold40G15681 Striga asiatica HOM05D006148 ORTHO05D007955 9.8e-40 167.5 151 60.9
CANSAT21G1845 Cannabis sativa HOM05D006148 ORTHO05D007955 2.2e-39 166.4 144 59.0
Gohir.D12G216200 Gossypium hirsutum HOM05D006148 ORTHO05D007955 2.2e-39 166.4 139 61.9
Gorai.008G231600 Gossypium raimondii HOM05D006148 ORTHO05D007955 2.2e-39 166.4 139 61.9
Gohir.A12G213600 Gossypium hirsutum HOM05D006148 ORTHO05D007955 2.8e-39 166.0 139 61.2
Lj3g0001636 Lotus japonicus HOM05D006148 ORTHO05D007955 2.8e-39 166.0 129 67.4
Dinv21692 Davidia involucrata HOM05D006148 ORTHO05D007955 4.9e-39 165.2 143 58.0
Eucgr.D02128 Eucalyptus grandis HOM05D006148 ORTHO05D007955 4.9e-39 165.2 146 59.6
CSS0033428 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 6.3e-39 164.9 142 60.6
SGA_v2.0_scaffold377G50308 Striga asiatica HOM05D006148 ORTHO05D007955 8.3e-39 164.5 152 59.9
MSTRG.9371 Avicennia marina HOM05D006148 ORTHO05D007955 1.1e-38 164.1 146 60.3
ClCG09G012770 Citrullus lanatus HOM05D006148 ORTHO05D007955 1.4e-38 163.7 137 62.0
Duzib068G0643 Durio zibethinus HOM05D006148 ORTHO05D007955 1.4e-38 163.7 139 60.4
Cc02_g08620 Coffea canephora HOM05D006148 ORTHO05D007955 1.8e-38 163.3 144 61.1
Glyma.09G078400 Glycine max HOM05D006148 ORTHO05D007955 2.4e-38 162.9 146 58.9
Manes.02G044300 Manihot esculenta HOM05D006148 ORTHO05D007955 3.1e-38 162.5 137 60.6
Atru.chr9.1220 Acer truncatum HOM05D006148 ORTHO05D007955 4.1e-38 162.2 147 58.5
Ciclev10022620m.g Citrus clementina HOM05D006148 ORTHO05D007955 4.1e-38 162.2 152 56.6
Oeu017209.1 Olea europaea HOM05D006148 ORTHO05D007955 5.4e-38 161.8 142 57.7
PGR031G0321 Punica granatum HOM05D006148 ORTHO05D007955 5.4e-38 161.8 144 58.3
Actinidia10861 Actinidia chinensis HOM05D006148 ORTHO05D007955 7.0e-38 161.4 147 55.1
Nitab4.5_0007628g0010 Nicotiana tabacum HOM05D006148 ORTHO05D007955 9.1e-38 161.0 142 59.2
Oeu040676.1 Olea europaea HOM05D006148 ORTHO05D007955 9.1e-38 161.0 148 56.8
Hma1.2p1_0840F.1_g226570 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 1.2e-37 160.6 147 53.7
Sed0014825 Sechium edule HOM05D006148 ORTHO05D007955 2.0e-37 159.8 139 59.7
Migut.I00620 Erythranthe guttata HOM05D006148 ORTHO05D007955 3.5e-37 159.1 131 61.8
PGSC0003DMG400026249 Solanum tuberosum HOM05D006148 ORTHO05D007955 1.0e-36 157.5 137 57.7
Rhsim07G0118900 Rhododendron simsii HOM05D006148 ORTHO05D007955 1.3e-36 157.1 131 59.5
MELO3C003333.2 Cucumis melo HOM05D006148 ORTHO05D007955 1.7e-36 156.8 125 64.8
TAR375G0576 Trochodendron aralioides HOM05D006148 ORTHO05D007955 1.7e-36 156.8 147 54.4
CiPaw.12G047200 Carya illinoinensis HOM05D006148 ORTHO05D007955 2.3e-36 156.4 139 58.3
Nitab4.5_0003456g0030 Nicotiana tabacum HOM05D006148 ORTHO05D007955 3.8e-36 155.6 133 58.6
Solyc08g077970.2 Solanum lycopersicum HOM05D006148 ORTHO05D007955 3.8e-36 155.6 137 56.9
Thecc.03G242700 Theobroma cacao HOM05D006148 ORTHO05D007955 5.0e-36 155.2 123 65.9
vmacro14126 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 6.6e-36 154.8 134 56.7
Nitab4.5_0000506g0080 Nicotiana tabacum HOM05D006148 ORTHO05D007955 8.6e-36 154.5 133 57.9
COL.COLO4_07508 Corchorus olitorius HOM05D006148 ORTHO05D007955 1.1e-35 154.1 139 57.6
Sopen08g026480 Solanum pennellii HOM05D006148 ORTHO05D007955 1.9e-35 153.3 137 56.2
TWI15G0129 Tripterygium wilfordii HOM05D006148 ORTHO05D007955 1.9e-35 153.3 129 58.1
MD04G1051900 Malus domestica HOM05D006148 ORTHO05D007955 3.3e-35 152.5 148 55.4
CSS0030063 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 5.5e-35 151.8 144 54.9
CAN.G761.17 Capsicum annuum HOM05D006148 ORTHO05D007955 5.5e-35 151.8 147 53.1
Prupe.5G058400 Prunus persica HOM05D006148 ORTHO05D007955 5.5e-35 151.8 148 54.7
unitig_747.g21320 Utricularia gibba HOM05D006148 ORTHO05D007955 5.5e-35 151.8 129 58.9
DCAR_005581 Daucus carota HOM05D006148 ORTHO05D007955 7.2e-35 151.4 134 54.5
CsaV3_3G049830 Cucumis sativus L. HOM05D006148 ORTHO05D007955 9.5e-35 151.0 141 58.2
MD06G1048200 Malus domestica HOM05D006148 ORTHO05D007955 9.5e-35 151.0 128 60.2
THA.LOC104814463 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 9.5e-35 151.0 128 59.4
unitig_46.g17987 Utricularia gibba HOM05D006148 ORTHO05D007955 1.6e-34 150.2 129 58.9
Carub.0007s2441 Capsella rubella HOM05D006148 ORTHO05D007955 2.1e-34 149.8 128 57.8
Potri.012G038600 Populus trichocarpa HOM05D006148 ORTHO05D007955 2.1e-34 149.8 130 59.2
SalBow1G4160 Salvia bowleyana HOM05D006148 ORTHO05D007955 2.8e-34 149.4 123 61.0
Sed0021147 Sechium edule HOM05D006148 ORTHO05D007955 2.8e-34 149.4 153 51.6
THA.LOC104807925 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 1.0e-33 147.5 128 59.4
Aa31LG2G13090 Aethionema arabicum HOM05D006148 ORTHO05D007955 1.4e-33 147.1 128 57.0
Aqoxy7G03487 Aquilegia oxysepala HOM05D006148 ORTHO05D007955 1.8e-33 146.7 139 54.7
MBI15_g47175_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 1.8e-33 146.7 145 53.8
Peaxi162Scf00190g00088 Petunia axillaris HOM05D006148 ORTHO05D007955 1.8e-33 146.7 131 55.7
Sopen06g021070 Solanum pennellii HOM05D006148 ORTHO05D007955 2.3e-33 146.4 143 50.3
PGSC0003DMG400026577 Solanum tuberosum HOM05D006148 ORTHO05D007955 2.3e-33 146.4 143 50.3
Rhsim07G0118700 Rhododendron simsii HOM05D006148 ORTHO05D007955 3.0e-33 146.0 149 52.3
DCAR_008334 Daucus carota HOM05D006148 ORTHO05D007955 4.0e-33 145.6 131 53.4
Solyc06g060920.3 Solanum lycopersicum HOM05D006148 ORTHO05D007955 4.0e-33 145.6 143 50.3
RcHm_v2.0_Chr7g0205301 Rosa chinensis HOM05D006148 ORTHO05D007955 6.8e-33 144.8 139 54.0
BcaC09g50434 Brassica carinata HOM05D006148 ORTHO05D007955 1.2e-32 144.1 128 57.0
BcaNung00135 Brassica carinata HOM05D006148 ORTHO05D007955 1.2e-32 144.1 128 57.0
BraA01t01958Z Brassica rapa HOM05D006148 ORTHO05D007955 1.2e-32 144.1 128 57.0
FvH4_5g20230 Fragaria vesca HOM05D006148 ORTHO05D007955 1.2e-32 144.1 139 55.4
A01p20300 Brassica napus HOM05D006148 ORTHO05D007955 1.5e-32 143.7 128 56.2
C01p25460 Brassica napus HOM05D006148 ORTHO05D007955 1.5e-32 143.7 128 56.2
BolC1t02497H Brassica oleracea HOM05D006148 ORTHO05D007955 2.0e-32 143.3 128 57.0
FAN13G2154 Fragaria x ananassa HOM05D006148 ORTHO05D007955 3.4e-32 142.5 139 54.7
FAN13G3051 Fragaria x ananassa HOM05D006148 ORTHO05D007955 3.4e-32 142.5 139 54.7
Sc22g0005540 Simmondsia chinensis HOM05D006148 ORTHO05D007955 7.5e-32 141.4 142 52.8
Sp7g17180 Schrenkiella parvula HOM05D006148 ORTHO05D007955 9.8e-32 141.0 128 56.2
ECA248G1075 Erigeron canadensis HOM05D006148 ORTHO05D007955 1.3e-31 140.6 147 47.6
THA.LOC104812735 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 1.3e-31 140.6 145 53.1
Lj2A228G47 Lonicera japonica HOM05D006148 ORTHO05D007955 1.7e-31 140.2 109 62.4
Sabra12G0027000 Salix brachista HOM05D006148 ORTHO05D007955 4.9e-31 138.7 141 52.5
Lj3A721T48 Lonicera japonica HOM05D006148 ORTHO05D007955 1.4e-30 137.1 120 55.8
CDE04G1348 Ceratophyllum demersum HOM05D006148 ORTHO05D007955 4.1e-30 135.6 144 48.6
PSO541G2943 Papaver somniferum HOM05D006148 ORTHO05D007955 5.4e-30 135.2 120 54.2
CARHR223570 Cardamine hirsuta HOM05D006148 ORTHO05D007955 9.2e-30 134.4 142 50.7
Lsat_1_v5_gn_3_16181 Lactuca sativa HOM05D006148 ORTHO05D007955 1.6e-29 133.7 153 45.8
EL10Ac5g12797 Beta vulgaris HOM05D006148 ORTHO05D007955 4.6e-29 132.1 135 53.3
Haze_05448 Corylus avellana HOM05D006148 ORTHO05D007955 4.6e-29 132.1 209 40.2
AT4G17010 Arabidopsis thaliana HOM05D006148 ORTHO05D007955 7.8e-29 131.3 128 53.1
HanXRQChr17g0550021 Helianthus annuus HOM05D006148 ORTHO05D007955 1.3e-28 130.6 130 49.2
FAN04G0567 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.7e-28 130.2 161 47.2
HPP92_005702 Vanilla planifolia HOM05D006148 ORTHO05D007955 1.7e-28 130.2 121 53.7
Hund11457 Selenicereus undatus HOM05D006148 ORTHO05D007955 2.3e-28 129.8 125 53.6
PSO675G9254 Papaver somniferum HOM05D006148 ORTHO05D007955 2.9e-28 129.4 128 53.1
AL7G37710 Arabidopsis lyrata HOM05D006148 ORTHO05D007955 1.9e-27 126.7 128 51.6
Thhalv10026445m.g Eutrema salsugineum HOM05D006148 ORTHO05D007955 1.9e-27 126.7 128 51.6
FAN08G3523 Fragaria x ananassa HOM05D006148 ORTHO05D007955 2.5e-27 126.3 170 44.7
Os04g0431800 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 2.5e-27 126.3 144 47.9
AUR62017180 Chenopodium quinoa HOM05D006148 ORTHO05D007955 1.6e-26 123.6 136 47.1
Nn1g00796 Nelumbo nucifera HOM05D006148 ORTHO05D007955 4.0e-25 119.0 126 50.0
Os02g0494600 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 5.2e-25 118.6 137 47.4
Zm00001eb422600 Zea mays HOM05D006148 ORTHO05D007955 5.2e-25 118.6 106 55.7
Hma1.2p1_1008F.1_g247180 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 8.9e-25 117.9 113 54.0
ATR0767G234 Amborella trichopoda HOM05D006148 ORTHO05D007955 1.2e-24 117.5 127 46.5
MBI06_g25325_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 7.8e-21 104.8 114 48.2
QL12p009037 Quercus lobata HOM05D006148 ORTHO05D007955 2.5e-19 99.8 299 28.4
vmacro00048 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 5.6e-19 98.6 75 64.0
Lj2A721G5 Lonicera japonica HOM05D006148 ORTHO05D007955 5.2e-17 92.0 70 64.3
Ah.07g196390 Amaranthus hybridus HOM05D006148 ORTHO05D007955 1.5e-16 90.5 99 50.5
SEGI_12345 Sequoiadendron giganteum HOM05D006148 ORTHO05D007955 8.3e-15 84.7 171 36.8
Nitab4.5_0000500g0150 Nicotiana tabacum HOM05D006148 ORTHO05D007955 1.2e-13 80.9 91 50.5
Cpa.g.sc1152.2 Carica papaya HOM05D006148 ORTHO05D007955 1.3e-12 77.4 76 48.7
AUR62027260 Chenopodium quinoa HOM05D006148 ORTHO05D007955 4.0e-09 65.9 136 32.4
AUR62010708 Chenopodium quinoa HOM05D006148 ORTHO05D007955 6.8e-09 65.1 136 32.4
Oeu017208.1 Olea europaea HOM05D002196 ORTHO05D002565 1.5e-08 63.9 66 48.5
MBI15_g37973_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 9.2e-06 54.7 52 50.0


User provided reference genes

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