Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.0G81PD Arachis hypogaea HOM05D000590 ORTHO05D006825 1.8e-90 335.9 164 100.0
Glyma.16G025000 Glycine max HOM05D000590 ORTHO05D006825 7.4e-73 277.3 207 70.5
Phvul.010G113800 Phaseolus vulgaris HOM05D000590 ORTHO05D006825 2.2e-72 275.8 207 69.1
Psat4g160760 Pisum sativum HOM05D000590 ORTHO05D006825 5.0e-69 264.6 207 66.2
Lj3g0003332 Lotus japonicus HOM05D000590 ORTHO05D006825 1.9e-68 262.7 207 65.2
TPR.G15352 Trifolium pratense HOM05D000590 ORTHO05D006825 1.0e-66 256.9 207 63.3
Lalb_Chr10g0100491 Lupinus albus HOM05D000590 ORTHO05D006825 2.0e-65 252.7 178 71.3
VMungo0331G1406 Vigna mungo HOM05D000590 ORTHO05D000717 2.0e-65 252.7 178 71.3
GSVIVG01027095001 Vitis vinifera HOM05D000590 ORTHO05D006825 1.1e-60 236.9 207 58.5
MD01G1080100 Malus domestica HOM05D000590 ORTHO05D006825 1.5e-60 236.5 207 58.9
GSVIVG01027098001 Vitis vinifera HOM05D000590 ORTHO05D006825 1.5e-60 236.5 207 58.5
Lj7A501T47 Lonicera japonica HOM05D000590 ORTHO05D006825 3.2e-60 235.3 207 58.5
PGR031G1800 Punica granatum HOM05D000590 ORTHO05D006825 2.1e-59 232.6 207 57.5
Haze_15659 Corylus avellana HOM05D000590 ORTHO05D006825 6.8e-58 227.6 207 58.0
CANSAT56G2355 Cannabis sativa HOM05D000590 ORTHO05D006825 2.0e-57 226.1 208 57.7
Prupe.2G187500 Prunus persica HOM05D000590 ORTHO05D006825 2.6e-57 225.7 207 57.5
Ca_23539_v3 Cicer arietinum L. HOM05D000590 ORTHO05D006825 3.4e-57 225.3 185 63.2
SGA_v2.0_scaffold5G03015 Striga asiatica HOM05D000590 ORTHO05D006825 5.7e-57 224.6 191 57.1
Cfa003800 Carpinus fangiana HOM05D000590 ORTHO05D001713 1.7e-56 223.0 207 56.5
Rhsim01G0172200 Rhododendron simsii HOM05D000590 ORTHO05D006825 1.7e-56 223.0 207 56.0
RcHm_v2.0_Chr1g0359371 Rosa chinensis HOM05D000590 ORTHO05D006825 2.2e-56 222.6 207 56.0
Actinidia28121 Actinidia chinensis HOM05D000590 ORTHO05D006825 1.1e-55 220.3 206 57.8
Migut.B01870 Erythranthe guttata HOM05D000590 ORTHO05D006825 1.1e-55 220.3 207 55.1
Dinv35112 Davidia involucrata HOM05D000590 ORTHO05D006825 1.4e-55 219.9 206 58.3
FAN06G0495 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.4e-55 219.9 207 55.1
Oeu015362.1 Olea europaea HOM05D000590 ORTHO05D006825 1.4e-55 219.9 207 56.0
SalBow3G4091 Salvia bowleyana HOM05D000590 ORTHO05D006825 1.4e-55 219.9 207 56.0
FAN06G0513 Fragaria x ananassa HOM05D000590 ORTHO05D006825 5.4e-55 218.0 207 54.6
Gohir.A08G034400 Gossypium hirsutum HOM05D000590 ORTHO05D006825 5.4e-55 218.0 208 54.3
FAN01G2486 Fragaria x ananassa HOM05D000590 ORTHO05D006825 7.0e-55 217.6 207 54.6
Gorai.004G043900 Gossypium raimondii HOM05D000590 ORTHO05D006825 9.1e-55 217.2 208 54.3
Gohir.D08G044900 Gossypium hirsutum HOM05D000590 ORTHO05D006825 1.2e-54 216.9 208 54.3
FAN10G1076 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.6e-54 216.5 207 54.6
QL04p061137 Quercus lobata HOM05D000590 ORTHO05D006825 1.6e-54 216.5 205 55.1
Duzib133G1228 Durio zibethinus HOM05D000590 ORTHO05D006825 2.7e-54 215.7 207 56.5
AUR62004487 Chenopodium quinoa HOM05D000590 ORTHO05D006825 3.5e-54 215.3 208 53.8
EL10Ac1g00275 Beta vulgaris HOM05D000590 ORTHO05D006825 4.5e-54 214.9 208 54.3
FAN10G3131 Fragaria x ananassa HOM05D000590 ORTHO05D006825 4.5e-54 214.9 207 54.1
Medtr8g027735 Medicago truncatula HOM05D000590 ORTHO05D006825 7.7e-54 214.2 180 61.7
AUR62023466 Chenopodium quinoa HOM05D000590 ORTHO05D006825 1.0e-53 213.8 207 53.1
FvH4_7g16360 Fragaria vesca HOM05D000590 ORTHO05D006825 1.0e-53 213.8 207 54.6
Nitab4.5_0004999g0020 Nicotiana tabacum HOM05D000590 ORTHO05D006825 1.3e-53 213.4 206 53.4
Nitab4.5_0000838g0230 Nicotiana tabacum HOM05D000590 ORTHO05D006825 1.7e-53 213.0 207 53.6
Nn2g14772 Nelumbo nucifera HOM05D000590 ORTHO05D006825 3.8e-53 211.8 208 54.8
Sed0003230 Sechium edule HOM05D000590 ORTHO05D006825 6.5e-53 211.1 190 58.4
CsaV3_6G007130 Cucumis sativus L. HOM05D000590 ORTHO05D006825 8.6e-53 210.7 206 54.9
Duzib138G1692 Durio zibethinus HOM05D000590 ORTHO05D006825 8.6e-53 210.7 212 55.2
Cc02_g39290 Coffea canephora HOM05D000590 ORTHO05D006825 1.1e-52 210.3 207 53.6
Solyc01g095870.3 Solanum lycopersicum HOM05D000590 ORTHO05D006825 1.5e-52 209.9 205 53.2
Sopen01g039610 Solanum pennellii HOM05D000590 ORTHO05D006825 1.5e-52 209.9 205 53.2
Aqoxy5G04231 Aquilegia oxysepala HOM05D000590 ORTHO05D006825 7.2e-52 207.6 207 53.6
Peaxi162Scf00786g00323 Petunia axillaris HOM05D000590 ORTHO05D006825 7.2e-52 207.6 207 52.2
CAN.G986.8 Capsicum annuum HOM05D000590 ORTHO05D006825 1.2e-51 206.8 205 53.2
MELO3C022415.2 Cucumis melo HOM05D000590 ORTHO05D006825 1.2e-51 206.8 206 54.4
TWI14G0815 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 1.2e-51 206.8 207 51.7
Lsat_1_v5_gn_7_1240 Lactuca sativa HOM05D000590 ORTHO05D006825 2.1e-51 206.1 205 49.8
TWI59G0780 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 2.8e-51 205.7 205 53.7
Migut.N01547 Erythranthe guttata HOM05D000590 ORTHO05D006825 6.1e-51 204.5 207 51.7
Cpa.g.sc96.9 Carica papaya HOM05D000590 ORTHO05D006825 8.0e-51 204.1 163 62.0
MSTRG.17339 Avicennia marina HOM05D000590 ORTHO05D006825 2.3e-50 202.6 178 57.3
AL5G44280 Arabidopsis lyrata HOM05D000590 ORTHO05D006825 5.2e-50 201.4 207 52.7
AT3G61730 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 5.2e-50 201.4 207 53.1
TAR375G0589 Trochodendron aralioides HOM05D000590 ORTHO05D006825 8.9e-50 200.7 179 55.9
BcaB02g08143 Brassica carinata HOM05D000590 ORTHO05D006825 1.5e-49 199.9 207 52.7
Potri.014G098300 Populus trichocarpa HOM05D000590 ORTHO05D006825 2.6e-49 199.1 206 50.5
FAN03G1068 Fragaria x ananassa HOM05D000590 ORTHO05D006825 3.4e-49 198.7 196 52.0
Thhalv10006430m.g Eutrema salsugineum HOM05D000590 ORTHO05D006825 4.4e-49 198.4 207 51.7
CSS0016052 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006825 5.7e-49 198.0 117 77.8
CARHR172060 Cardamine hirsuta HOM05D000590 ORTHO05D006825 9.8e-49 197.2 207 52.7
Oeu004946.1 Olea europaea HOM05D000590 ORTHO05D006825 1.3e-48 196.8 223 48.9
THA.LOC104817360 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 1.3e-48 196.8 207 54.1
vmacro12678 Vaccinium macrocarpon HOM05D000590 ORTHO05D001713 1.3e-48 196.8 120 74.2
PSO782G3674 Papaver somniferum HOM05D000590 ORTHO05D006825 2.8e-48 195.7 209 49.8
CiPaw.02G040500 Carya illinoinensis HOM05D000590 ORTHO05D006825 3.7e-48 195.3 179 54.7
Ciclev10023676m.g Citrus clementina HOM05D000590 ORTHO05D006825 3.7e-48 195.3 207 48.3
PGSC0003DMG400000222 Solanum tuberosum HOM05D000590 ORTHO05D006825 3.7e-48 195.3 176 55.7
MBI06_g08454_MAGBIO Magnolia biondii HOM05D000590 ORTHO05D006825 4.9e-48 194.9 207 51.2
Eucgr.D02371 Eucalyptus grandis HOM05D000590 ORTHO05D006825 6.3e-48 194.5 207 51.2
AT5G36000 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 1.1e-47 193.7 207 51.2
PSO478G0645 Papaver somniferum HOM05D000590 ORTHO05D006825 1.1e-47 193.7 209 49.3
Aa31LG10G15730 Aethionema arabicum HOM05D000590 ORTHO05D001713 4.1e-47 191.8 207 51.2
HanXRQChr04g0120221 Helianthus annuus HOM05D000590 ORTHO05D006825 4.1e-47 191.8 206 48.1
Manes.01G246600 Manihot esculenta HOM05D000590 ORTHO05D006825 4.1e-47 191.8 208 47.1
BraA04t15812Z Brassica rapa HOM05D000590 ORTHO05D006825 7.0e-47 191.0 205 52.2
ATR0602G065 Amborella trichopoda HOM05D000590 ORTHO05D006825 1.3e-45 186.8 208 46.6
THA.LOC104802069 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 1.1e-44 183.7 207 51.2
Sabra14G0072100 Salix brachista HOM05D000590 ORTHO05D001713 2.5e-44 182.6 225 45.3
BolC6t37952H Brassica oleracea HOM05D000590 ORTHO05D006825 1.2e-43 180.3 208 48.1
Sp5g01640 Schrenkiella parvula HOM05D000590 ORTHO05D006825 3.6e-43 178.7 179 53.1
Ah.05g179600 Amaranthus hybridus HOM05D000590 ORTHO05D006825 6.1e-43 177.9 186 51.6
Thecc.01G343200 Theobroma cacao HOM05D000590 ORTHO05D006825 1.2e-41 173.7 180 51.1
PSO063G6641 Papaver somniferum HOM05D000590 ORTHO05D006825 2.6e-41 172.6 123 66.7
Sc26g0000670 Simmondsia chinensis HOM05D000590 ORTHO05D006825 2.6e-41 172.6 119 65.5
C04p31120 Brassica napus HOM05D000590 ORTHO05D006825 4.9e-40 168.3 205 48.8
DCAR_006973 Daucus carota HOM05D000590 ORTHO05D006825 8.3e-40 167.5 210 43.3
Atru.chr5.661 Acer truncatum HOM05D000590 ORTHO05D006825 1.8e-39 166.4 205 43.9
SEGI_08329 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 2.4e-39 166.0 191 45.5
COL.COLO4_06291 Corchorus olitorius HOM05D000590 ORTHO05D000717 2.0e-38 162.9 169 50.9
CDE02G3030 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 2.7e-38 162.5 119 62.2
ECA236G1053 Erigeron canadensis HOM05D000590 ORTHO05D001713 6.0e-38 161.4 179 46.4
CDE02G2715 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 2.3e-37 159.5 150 52.0
arahy.Tifrunner.gnm1.ann1.AM6JUY Arachis hypogaea HOM05D000590 ORTHO05D006825 5.6e-36 154.8 115 73.0
BcaC02g10247 Brassica carinata HOM05D000590 ORTHO05D006825 1.2e-35 153.7 179 49.7
ClCG06G001200 Citrullus lanatus HOM05D000590 ORTHO05D006825 3.6e-35 152.1 190 47.9
SEGI_01413 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 1.8e-34 149.8 119 56.3
Glyma.07G056100 Glycine max HOM05D000590 ORTHO05D006825 9.8e-33 144.1 143 55.2
A04p00950 Brassica napus HOM05D000590 ORTHO05D006825 1.7e-32 143.3 210 41.0
C06p27910 Brassica napus HOM05D000590 ORTHO05D006825 6.4e-32 141.4 180 44.4
BraA07t30209Z Brassica rapa HOM05D004730 ORTHO05D005705 4.1e-31 138.7 180 44.4
AT3G62500 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 9.2e-31 137.5 129 54.3
arahy.Tifrunner.gnm1.ann1.06LZL4 Arachis hypogaea HOM05D000590 ORTHO05D006825 4.6e-30 135.2 64 98.4
C06p27850 Brassica napus HOM05D004730 ORTHO05D006825 1.2e-27 127.1 93 62.4
A07p25690 Brassica napus HOM05D004730 ORTHO05D005705 8.1e-27 124.4 93 62.4
Pp3c6_8570 Physcomitrium patens HOM05D000590 ORTHO05D006825 3.1e-26 122.5 120 48.3
SMO200G0118 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 2.6e-25 119.4 200 36.5
SMO164G0232 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 9.9e-25 117.5 123 45.5
CBR_g71803 Chara braunii HOM05D000590 ORTHO05D006825 5.4e-23 111.7 123 47.2
CBR_g49078 Chara braunii HOM05D000590 ORTHO05D006825 1.0e-21 107.5 123 44.7
Carub.0005s2847 Capsella rubella HOM05D000590 ORTHO05D006825 2.3e-21 106.3 143 43.4
SMO338G0043 Selaginella moellendorffii HOM05D004142 ORTHO05D005411 3.0e-21 105.9 179 33.5
HPP92_002828 Vanilla planifolia HOM05D000590 ORTHO05D006825 8.6e-21 104.4 239 32.6
AagrBONN_evm.TU.Sc2ySwM_344.2724 Anthoceros agrestis HOM05D000590 ORTHO05D006825 7.3e-20 101.3 94 50.0
TPR.G3009 Trifolium pratense HOM05D000590 ORTHO05D006825 1.6e-19 100.1 105 49.5
Os01g0219200 Oryza sativa ssp. japonica HOM05D000590 ORTHO05D006825 3.6e-19 99.0 122 44.3
SHI13291 Sapria himalayana HOM05D000590 ORTHO05D006825 5.8e-17 91.7 65 67.7
Mapoly0251s0003 Marchantia polymorpha HOM05D000590 ORTHO05D006825 2.4e-15 86.3 123 35.0
BcaB02g08144 Brassica carinata HOM05D000590 ORTHO05D006825 1.5e-12 77.0 189 33.3
HanXRQChr09g0243571 Helianthus annuus HOM05D000590 ORTHO05D006825 2.1e-11 73.2 114 36.0
Zm00001eb197190 Zea mays HOM05D002169 ORTHO05D023180 4.0e-10 68.9 114 33.3
Rhsim02G0230200 Rhododendron simsii HOM05D000590 ORTHO05D006825 6.9e-10 68.2 70 47.1
Lj1g0015259 Lotus japonicus HOM05D000590 ORTHO05D006825 7.6e-09 64.7 36 83.3
TWI23G0685 Tripterygium wilfordii HOM05D000354 ORTHO05D000717 4.2e-07 58.9 31 77.4


User provided reference genes

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