Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.0ELP1Z Arachis hypogaea HOM05D006743 ORTHO05D008518 8.7e-185 650.2 336 100.0
arahy.Tifrunner.gnm1.ann1.MT78EL Arachis hypogaea HOM05D006743 ORTHO05D008518 1.2e-183 646.4 336 99.1
Lalb_Chr16g0385831 Lupinus albus HOM05D006743 ORTHO05D008518 3.9e-161 571.6 337 86.9
Psat4g134120 Pisum sativum HOM05D006743 ORTHO05D008518 6.5e-156 554.3 337 84.6
Glyma.18G120051 Glycine max HOM05D006743 ORTHO05D008518 2.1e-154 549.3 337 84.6
Ca_24218_v3 Cicer arietinum L. HOM05D006743 ORTHO05D008518 3.5e-154 548.5 339 83.5
Glyma.08G300451 Glycine max HOM05D006743 ORTHO05D008518 2.3e-153 545.8 337 84.0
VMungo0251G3125 Vigna mungo HOM05D006743 ORTHO05D008518 6.7e-153 544.3 337 82.8
Lj4g0006351 Lotus japonicus HOM05D006743 ORTHO05D008518 1.5e-152 543.1 321 86.0
Medtr8g055880 Medicago truncatula HOM05D006743 ORTHO05D008518 3.3e-152 542.0 337 83.4
Phvul.003G049600 Phaseolus vulgaris HOM05D006743 ORTHO05D008518 3.8e-148 528.5 321 84.4
CiPaw.06G083800 Carya illinoinensis HOM05D006743 ORTHO05D008518 9.4e-147 523.9 337 80.7
Gohir.A12G165400 Gossypium hirsutum HOM05D006743 ORTHO05D008518 2.0e-144 516.2 334 78.7
CANSAT80G2808 Cannabis sativa HOM05D006743 ORTHO05D008518 7.4e-144 514.2 333 77.8
TPR.G31812 Trifolium pratense HOM05D006743 ORTHO05D008518 7.4e-144 514.2 327 82.3
Hund05886 Selenicereus undatus HOM05D006743 ORTHO05D008518 1.1e-142 510.4 334 77.2
Dinv16636 Davidia involucrata HOM05D006743 ORTHO05D008518 1.8e-142 509.6 335 77.9
MD16G1074200 Malus domestica HOM05D006743 ORTHO05D008518 1.8e-142 509.6 337 78.9
TWI12G0418 Tripterygium wilfordii HOM05D006743 ORTHO05D008518 3.1e-142 508.8 332 75.6
Cpa.g.sc128.13 Carica papaya HOM05D006743 ORTHO05D008518 4.1e-142 508.4 328 78.0
Gohir.D12G168500 Gossypium hirsutum HOM05D006743 ORTHO05D008518 1.5e-141 506.5 334 77.2
Manes.01G186600 Manihot esculenta HOM05D006743 ORTHO05D008518 3.4e-141 505.4 334 76.3
PGR119G0901 Punica granatum HOM05D006743 ORTHO05D008518 3.4e-141 505.4 337 74.8
Potri.013G124050 Populus trichocarpa HOM05D006743 ORTHO05D008518 1.0e-140 503.8 337 76.6
THA.LOC104805154 Tarenaya hassleriana HOM05D006743 ORTHO05D008518 1.7e-140 503.1 336 75.9
CSS0008818 Camellia sinensis var. sinensis HOM05D006743 ORTHO05D008518 5.0e-140 501.5 330 76.7
FvH4_4g31470 Fragaria vesca HOM05D006743 ORTHO05D008518 3.2e-139 498.8 338 76.6
FAN22G1517 Fragaria x ananassa HOM05D006743 ORTHO05D008518 3.2e-139 498.8 338 76.3
CsaV3_7G025360 Cucumis sativus L. HOM05D006743 ORTHO05D008518 5.5e-139 498.0 328 75.6
Hma1.2p1_0598F.1_g186630 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 2.7e-138 495.7 337 75.7
MELO3C024128.2 Cucumis melo HOM05D006743 ORTHO05D008518 3.6e-138 495.4 328 75.0
Haze_12021 Corylus avellana HOM05D006743 ORTHO05D008518 4.7e-138 495.0 307 79.8
Rhsim12G0063200 Rhododendron simsii HOM05D006743 ORTHO05D008518 4.7e-138 495.0 332 76.2
TAR622G0326 Trochodendron aralioides HOM05D006743 ORTHO05D008518 4.7e-138 495.0 337 74.8
Atru.chr11.1802 Acer truncatum HOM05D006743 ORTHO05D008518 6.1e-138 494.6 337 76.0
HanXRQChr12g0362551 Helianthus annuus HOM05D006743 ORTHO05D008518 6.1e-138 494.6 337 76.3
EL10Ac6g13192 Beta vulgaris HOM05D006743 ORTHO05D008518 7.9e-138 494.2 328 76.2
Potri.019G092000 Populus trichocarpa HOM05D006743 ORTHO05D008518 1.8e-137 493.0 330 75.5
RcHm_v2.0_Chr4g0439961 Rosa chinensis HOM05D006743 ORTHO05D008518 1.8e-137 493.0 335 75.8
GSVIVG01020003001 Vitis vinifera HOM05D006743 ORTHO05D008518 2.3e-137 492.7 337 73.6
AUR62028791 Chenopodium quinoa HOM05D006743 ORTHO05D008518 5.1e-137 491.5 328 76.2
Sp1g12650 Schrenkiella parvula HOM05D006743 ORTHO05D008518 5.1e-137 491.5 336 74.1
Carub.0001s1398 Capsella rubella HOM05D006743 ORTHO05D008518 6.7e-137 491.1 336 73.8
AL1G26180 Arabidopsis lyrata HOM05D006743 ORTHO05D008518 5.7e-136 488.0 326 74.5
MBI02_g23683_MAGBIO Magnolia biondii HOM05D006743 ORTHO05D008518 5.7e-136 488.0 335 74.6
Aa31LG1G750 Aethionema arabicum HOM05D006743 ORTHO05D008518 2.8e-135 485.7 337 72.4
BcaC05g25323 Brassica carinata HOM05D006743 ORTHO05D008518 3.7e-135 485.3 337 73.6
CARHR014720 Cardamine hirsuta HOM05D006743 ORTHO05D008518 1.1e-134 483.8 336 73.2
COL.COLO4_22995 Corchorus olitorius HOM05D006743 ORTHO05D008518 1.1e-134 483.8 334 74.3
A06p10280 Brassica napus HOM05D006743 ORTHO05D008518 7.0e-134 481.1 337 72.7
AT1G14300 Arabidopsis thaliana HOM05D006743 ORTHO05D008518 9.1e-134 480.7 336 72.6
MSTRG.13418 Avicennia marina HOM05D006743 ORTHO05D008518 9.1e-134 480.7 326 74.2
BraA06t24210Z Brassica rapa HOM05D006743 ORTHO05D008518 1.2e-133 480.3 337 72.7
Lj3C1038T21 Lonicera japonica HOM05D006743 ORTHO05D008518 1.2e-133 480.3 335 74.0
Peaxi162Scf00541g00528 Petunia axillaris HOM05D006743 ORTHO05D008518 1.5e-133 479.9 335 74.3
C05p12050 Brassica napus HOM05D006743 ORTHO05D008518 2.6e-133 479.2 337 72.1
ECA233G3761 Erigeron canadensis HOM05D006743 ORTHO05D008518 5.9e-133 478.0 328 73.2
Sabra13G0103000 Salix brachista HOM05D006743 ORTHO05D008518 1.7e-132 476.5 355 70.1
AUR62005766 Chenopodium quinoa HOM05D006743 ORTHO05D008518 2.2e-132 476.1 346 71.7
Lsat_1_v5_gn_8_52820 Lactuca sativa HOM05D006743 ORTHO05D008518 3.8e-132 475.3 334 72.5
vmacro01252 Vaccinium macrocarpon HOM05D006743 ORTHO05D008518 3.8e-132 475.3 374 68.2
Thecc.02G350900 Theobroma cacao HOM05D006743 ORTHO05D008518 1.1e-131 473.8 334 74.0
BolC5t29959H Brassica oleracea HOM05D006743 ORTHO05D008518 3.2e-131 472.2 329 72.0
Cc11_g13110 Coffea canephora HOM05D006743 ORTHO05D008518 3.2e-131 472.2 325 74.5
CAN.G58.36 Capsicum annuum HOM05D006743 ORTHO05D008518 1.8e-129 466.5 337 72.1
Solyc05g007440.3 Solanum lycopersicum HOM05D006743 ORTHO05D008518 2.3e-129 466.1 326 73.6
Nitab4.5_0012364g0010 Nicotiana tabacum HOM05D006743 ORTHO05D008518 3.9e-129 465.3 337 70.6
DCAR_007148 Daucus carota HOM05D006743 ORTHO05D008518 1.5e-128 463.4 328 71.3
FAN12G0030 Fragaria x ananassa HOM05D006743 ORTHO05D008518 1.5e-128 463.4 398 65.1
PGSC0003DMG400003385 Solanum tuberosum HOM05D006743 ORTHO05D008518 1.5e-128 463.4 337 71.8
unitig_22.g5546 Utricularia gibba HOM05D006743 ORTHO05D008518 1.3e-127 460.3 332 70.8
SalBow8G2540 Salvia bowleyana HOM05D006743 ORTHO05D008518 7.0e-126 454.5 327 71.3
Aqoxy3G00673 Aquilegia oxysepala HOM05D006743 ORTHO05D008518 5.0e-124 448.4 337 67.4
ClCG09G009490 Citrullus lanatus HOM05D006743 ORTHO05D008518 6.5e-124 448.0 321 72.0
PSO478G0657 Papaver somniferum HOM05D006743 ORTHO05D008518 6.5e-124 448.0 336 68.8
CDE02G3655 Ceratophyllum demersum HOM05D006743 ORTHO05D008518 4.7e-122 441.8 329 68.7
ATR0564G062 Amborella trichopoda HOM05D006743 ORTHO05D008518 5.2e-121 438.3 329 68.1
SGA_v2.0_scaffold389G50576 Striga asiatica HOM05D006743 ORTHO05D008518 7.5e-120 434.5 344 65.4
Sc14g0008270 Simmondsia chinensis HOM05D006743 ORTHO05D008518 2.7e-117 426.0 282 77.7
Duzib268G1478 Durio zibethinus HOM05D006743 ORTHO05D008518 1.0e-116 424.1 334 67.7
Nitab4.5_0000703g0080 Nicotiana tabacum HOM05D006743 ORTHO05D008518 1.2e-114 417.2 301 70.8
Nn3g17215 Nelumbo nucifera HOM05D006743 ORTHO05D008518 2.7e-114 416.0 337 67.4
Actinidia31893 Actinidia chinensis HOM05D006743 ORTHO05D008518 3.0e-113 412.5 337 64.4
Sed0013774 Sechium edule HOM05D006743 ORTHO05D008518 1.2e-112 410.6 330 65.2
BcaNung06708 Brassica carinata HOM05D006743 ORTHO05D008518 2.8e-111 406.0 337 64.4
Zm00001eb223220 Zea mays HOM05D006743 ORTHO05D008518 2.0e-109 399.8 335 63.9
Os10g0406800 Oryza sativa ssp. japonica HOM05D006743 ORTHO05D008518 8.6e-108 394.4 339 62.8
Mapoly0146s0011 Marchantia polymorpha HOM05D006743 ORTHO05D008518 1.6e-101 373.6 335 56.7
Sopen05g003320 Solanum pennellii HOM05D006743 ORTHO05D008518 3.9e-100 369.0 245 75.9
Pp3c6_14800 Physcomitrium patens HOM05D006743 ORTHO05D008518 1.0e-97 360.9 328 55.2
HPP92_011352 Vanilla planifolia HOM05D006743 ORTHO05D008518 3.3e-91 339.3 241 70.1
SMO307G0042 Selaginella moellendorffii HOM05D006743 ORTHO05D008518 8.0e-90 334.7 321 53.6
Hma1.2p1_0598F.1_g186620 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 6.8e-89 331.6 207 79.2
AagrBONN_evm.TU.Sc2ySwM_344.2267 Anthoceros agrestis HOM05D006743 ORTHO05D008518 1.4e-86 323.9 325 52.3
Migut.E00100 Erythranthe guttata HOM05D006743 ORTHO05D008518 1.7e-84 317.0 197 77.7
QL03p064380 Quercus lobata HOM05D006743 ORTHO05D008518 3.6e-82 309.3 201 80.6
AagrBONN_evm.TU.Sc2ySwM_27.11 Anthoceros agrestis HOM05D006743 ORTHO05D008518 4.0e-81 305.8 325 49.5
Oeu045403.1 Olea europaea HOM05D006743 ORTHO05D008518 1.4e-78 297.4 174 82.8
Lsat_1_v5_gn_7_2081 Lactuca sativa HOM05D006743 ORTHO05D008518 3.2e-70 269.6 238 62.6
Sabra19G0105400 Salix brachista HOM05D006743 ORTHO05D008518 1.2e-69 267.7 374 46.8
AagrBONN_evm.TU.Sc2ySwM_27.9 Anthoceros agrestis HOM05D006743 ORTHO05D008518 3.5e-69 266.2 325 44.9
DCAR_010724 Daucus carota HOM05D006743 ORTHO05D008518 1.3e-68 264.2 318 48.1
CBR_g41270 Chara braunii HOM05D006743 ORTHO05D008518 1.1e-65 254.6 363 40.8
Peaxi162Scf00541g00531 Petunia axillaris HOM05D006743 ORTHO05D008518 3.0e-60 236.5 175 68.0
AagrBONN_evm.TU.Sc2ySwM_117.3556 Anthoceros agrestis HOM05D006743 ORTHO05D008518 2.8e-50 203.4 175 54.3
Oeu045402.1 Olea europaea HOM05D006743 ORTHO05D008518 2.1e-45 187.2 153 66.0
Nn1g08820 Nelumbo nucifera HOM05D006743 ORTHO05D008518 1.9e-43 180.6 283 43.1
Nn4g22981 Nelumbo nucifera HOM05D006743 ORTHO05D008518 1.9e-43 180.6 283 43.1
Cre10.g437100 Chlamydomonas reinhardtii HOM05D006743 ORTHO05D008518 2.4e-41 173.7 327 33.3
QL03p064376 Quercus lobata HOM05D006743 ORTHO05D008518 2.0e-32 144.1 81 84.0
Migut.E00098 Erythranthe guttata HOM05D006743 ORTHO05D008518 1.0e-31 141.7 126 61.9
Actinidia28328 Actinidia chinensis HOM05D006743 ORTHO05D008518 1.0e-28 131.7 124 57.3
PRCOL_00003635 Prasinoderma coloniale HOM05D006743 ORTHO05D008518 5.9e-24 115.9 340 28.8
SEGI_09156 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 7.2e-22 109.0 74 66.2
Ca_23751_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 3.2e-14 83.6 154 39.6
Ca_27492_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 3.2e-14 83.6 154 39.6
SEGI_31629 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 8.8e-12 75.5 59 66.1
RcHm_v2.0_Chr5g0047461 Rosa chinensis HOM05D006743 ORTHO05D008518 1.9e-06 57.8 45 66.7


User provided reference genes

Program Settings