Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.0E5R4V Arachis hypogaea HOM05D005739 ORTHO05D007740 1.9e-125 452.6 243 100.0
arahy.Tifrunner.gnm1.ann1.B9PES8 Arachis hypogaea HOM05D005739 ORTHO05D007740 1.0e-118 430.3 242 96.7
arahy.Tifrunner.gnm1.ann1.KZ0328 Arachis hypogaea HOM05D005739 ORTHO05D007740 2.7e-103 379.0 213 89.7
arahy.Tifrunner.gnm1.ann1.FSQL8E Arachis hypogaea HOM05D005739 ORTHO05D007740 3.3e-101 372.1 228 91.2
arahy.Tifrunner.gnm1.ann1.53BRPK Arachis hypogaea HOM05D005739 ORTHO05D007740 1.5e-85 320.1 218 85.8
arahy.Tifrunner.gnm1.ann1.GPHX1M Arachis hypogaea HOM05D005739 ORTHO05D007740 3.9e-70 268.9 180 80.6
arahy.Tifrunner.gnm1.ann1.HAY2RB Arachis hypogaea HOM05D005739 ORTHO05D007740 1.9e-69 266.5 180 80.6
arahy.Tifrunner.gnm1.ann1.AD56MI Arachis hypogaea HOM05D005739 ORTHO05D083983 1.0e-65 254.2 179 77.7
arahy.Tifrunner.gnm1.ann1.7V36PE Arachis hypogaea HOM05D005739 ORTHO05D007740 1.7e-65 253.4 161 85.1
Glyma.07G258900 Glycine max HOM05D005739 ORTHO05D007740 2.2e-60 236.5 184 69.0
VMungo1215G0361 Vigna mungo HOM05D005739 ORTHO05D007740 2.8e-60 236.1 184 70.1
Phvul.003G077000 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 6.9e-59 231.5 184 68.5
TPR.G37091 Trifolium pratense HOM05D005739 ORTHO05D007740 1.2e-58 230.7 184 67.9
Lj6g0027190 Lotus japonicus HOM05D005739 ORTHO05D007740 5.9e-58 228.4 180 69.4
Psat4g007680 Pisum sativum HOM05D005739 ORTHO05D007740 7.7e-58 228.0 185 65.9
Ca_21095_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 2.1e-55 219.9 182 65.9
Ca_30203_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 2.1e-55 219.9 182 65.9
Medtr4g131840 Medicago truncatula HOM05D005739 ORTHO05D007740 1.8e-54 216.9 186 64.5
Lalb_Chr20g0118561 Lupinus albus HOM05D005739 ORTHO05D007740 3.7e-52 209.1 185 63.8
Potri.011G000100 Populus trichocarpa HOM05D005739 ORTHO05D007740 4.8e-52 208.8 180 63.3
Sabra11G0000600 Salix brachista HOM05D005739 ORTHO05D007740 8.2e-52 208.0 180 63.9
Prupe.4G024100 Prunus persica HOM05D005739 ORTHO05D007740 1.1e-51 207.6 180 63.9
TPR.G7643 Trifolium pratense HOM05D005739 ORTHO05D007740 1.4e-51 207.2 182 63.7
Medtr2g022780 Medicago truncatula HOM05D005739 ORTHO05D007740 4.1e-51 205.7 182 63.7
Atru.chr10.2176 Acer truncatum HOM05D005739 ORTHO05D007740 1.5e-50 203.8 180 62.8
QL05p074082 Quercus lobata HOM05D005739 ORTHO05D007740 2.0e-50 203.4 184 63.0
Cfa000251 Carpinus fangiana HOM05D005739 ORTHO05D007740 3.5e-50 202.6 180 63.3
Psat1g181440 Pisum sativum HOM05D005739 ORTHO05D007740 5.9e-50 201.8 182 61.5
Haze_06773 Corylus avellana HOM05D005739 ORTHO05D007740 1.3e-49 200.7 180 62.8
Glyma.13G206500 Glycine max HOM05D005739 ORTHO05D007740 1.7e-49 200.3 180 61.1
MD10G1317700 Malus domestica HOM05D005739 ORTHO05D007740 2.9e-49 199.5 180 62.8
Ca_00625_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 3.8e-49 199.1 182 63.2
Glyma.15G106200 Glycine max HOM05D005739 ORTHO05D007740 5.0e-49 198.7 180 61.1
Dinv13869 Davidia involucrata HOM05D005739 ORTHO05D007740 8.5e-49 198.0 180 62.2
Dinv17816 Davidia involucrata HOM05D005739 ORTHO05D007740 8.5e-49 198.0 180 62.2
Dinv20033 Davidia involucrata HOM05D005739 ORTHO05D007740 1.1e-48 197.6 184 61.4
Hma1.2p1_0813F.1_g222580 Hydrangea macrophylla HOM05D005739 ORTHO05D007740 3.2e-48 196.1 180 60.6
TAR627G1089 Trochodendron aralioides HOM05D005739 ORTHO05D007740 3.2e-48 196.1 180 60.0
Nitab4.5_0002155g0060 Nicotiana tabacum HOM05D005739 ORTHO05D007740 5.5e-48 195.3 183 60.1
TWI38G1065 Tripterygium wilfordii HOM05D005739 ORTHO05D007740 5.5e-48 195.3 180 60.6
MSTRG.15974 Avicennia marina HOM05D005739 ORTHO05D007740 7.2e-48 194.9 181 60.2
Ciclev10015698m.g Citrus clementina HOM05D005739 ORTHO05D007740 7.2e-48 194.9 180 60.6
CANSAT56G1696 Cannabis sativa HOM05D005739 ORTHO05D007740 9.4e-48 194.5 180 59.4
CiPaw.10G069300 Carya illinoinensis HOM05D005739 ORTHO05D007740 1.2e-47 194.1 184 59.2
VMungo0540G2038 Vigna mungo HOM05D005739 ORTHO05D007740 1.6e-47 193.7 180 58.9
BcaC04g21334 Brassica carinata HOM05D005739 ORTHO05D007740 3.6e-47 192.6 180 60.0
C09p33050 Brassica napus HOM05D005739 ORTHO05D007740 3.6e-47 192.6 180 60.0
BolC9t56140H Brassica oleracea HOM05D005739 ORTHO05D007740 3.6e-47 192.6 180 60.0
AL6G48370 Arabidopsis lyrata HOM05D005739 ORTHO05D007740 4.7e-47 192.2 180 61.1
A09p26050 Brassica napus HOM05D005739 ORTHO05D007740 4.7e-47 192.2 180 60.6
Carub.0006s3279 Capsella rubella HOM05D005739 ORTHO05D007740 4.7e-47 192.2 180 60.6
Nitab4.5_0007448g0040 Nicotiana tabacum HOM05D005739 ORTHO05D007740 6.1e-47 191.8 183 59.0
EL10Ac8g20019 Beta vulgaris HOM05D005739 ORTHO05D007740 8.0e-47 191.4 180 58.9
Cpa.g.sc198.24 Carica papaya HOM05D005739 ORTHO05D007740 1.0e-46 191.0 184 62.0
PGSC0003DMG400011257 Solanum tuberosum HOM05D005739 ORTHO05D007740 1.0e-46 191.0 183 58.5
Solyc10g005310.3 Solanum lycopersicum HOM05D005739 ORTHO05D007740 1.4e-46 190.7 183 58.5
BraA09t38171Z Brassica rapa HOM05D005739 ORTHO05D007740 1.8e-46 190.3 180 60.6
Nn1g03584 Nelumbo nucifera HOM05D005739 ORTHO05D007740 1.8e-46 190.3 180 59.4
Eucgr.D01304 Eucalyptus grandis HOM05D005739 ORTHO05D007740 2.3e-46 189.9 180 58.3
AUR62021982 Chenopodium quinoa HOM05D005739 ORTHO05D007740 3.0e-46 189.5 183 60.1
Lj1C1227G9 Lonicera japonica HOM05D005739 ORTHO05D007740 3.0e-46 189.5 181 61.9
CsaV3_6G049150 Cucumis sativus L. HOM05D005739 ORTHO05D007740 3.9e-46 189.1 180 56.7
GSVIVG01012654001 Vitis vinifera HOM05D005739 ORTHO05D007740 3.9e-46 189.1 180 59.4
MELO3C007380.2 Cucumis melo HOM05D005739 ORTHO05D007740 5.2e-46 188.7 180 57.2
Peaxi162Scf00203g01110 Petunia axillaris HOM05D005739 ORTHO05D007740 5.2e-46 188.7 180 60.0
Actinidia11847 Actinidia chinensis HOM05D005739 ORTHO05D007740 1.5e-45 187.2 183 60.1
Sed0020639 Sechium edule HOM05D005739 ORTHO05D007740 1.5e-45 187.2 180 60.0
AT4G04880 Arabidopsis thaliana HOM05D005739 ORTHO05D007740 2.6e-45 186.4 180 60.0
CARHR252690 Cardamine hirsuta HOM05D005739 ORTHO05D007740 2.6e-45 186.4 180 58.9
THA.LOC104812968 Tarenaya hassleriana HOM05D005739 ORTHO05D007740 2.6e-45 186.4 180 59.4
CSS0045804 Camellia sinensis var. sinensis HOM05D005739 ORTHO05D007740 3.3e-45 186.0 180 58.9
Ah.14g088100 Amaranthus hybridus HOM05D005739 ORTHO05D007740 4.4e-45 185.7 182 58.8
Sed0022137 Sechium edule HOM05D005739 ORTHO05D007740 4.4e-45 185.7 182 57.7
AUR62012674 Chenopodium quinoa HOM05D005739 ORTHO05D007740 5.7e-45 185.3 181 60.8
Migut.M01296 Erythranthe guttata HOM05D005739 ORTHO05D007740 5.7e-45 185.3 182 59.3
Phvul.006G151100 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 5.7e-45 185.3 180 57.8
COL.COLO4_31742 Corchorus olitorius HOM05D005739 ORTHO05D007740 7.4e-45 184.9 180 59.4
Manes.16G010200 Manihot esculenta HOM05D005739 ORTHO05D007740 7.4e-45 184.9 141 70.9
RcHm_v2.0_Chr5g0003721 Rosa chinensis HOM05D005739 ORTHO05D007740 7.4e-45 184.9 183 57.9
PSO832G4144 Papaver somniferum HOM05D005739 ORTHO05D007740 1.3e-44 184.1 181 58.0
Lsat_1_v5_gn_4_60101 Lactuca sativa HOM05D005739 ORTHO05D007740 2.2e-44 183.3 180 56.7
SGA_v2.0_scaffold4G01929 Striga asiatica HOM05D005739 ORTHO05D007740 2.8e-44 183.0 183 60.1
ClCG01G022090 Citrullus lanatus HOM05D005739 ORTHO05D007740 3.7e-44 182.6 166 60.2
Duzib235G0413 Durio zibethinus HOM05D005739 ORTHO05D007740 3.7e-44 182.6 180 57.2
FvH4_3g02490 Fragaria vesca HOM05D005739 ORTHO05D007740 3.7e-44 182.6 180 56.7
Gohir.A06G147200 Gossypium hirsutum HOM05D005739 ORTHO05D007740 4.8e-44 182.2 180 57.8
Gohir.D06G153000 Gossypium hirsutum HOM05D005739 ORTHO05D007740 4.8e-44 182.2 180 57.8
Sp6g04100 Schrenkiella parvula HOM05D005739 ORTHO05D007740 4.8e-44 182.2 180 58.9
Cc09_g01940 Coffea canephora HOM05D005739 ORTHO05D007740 8.2e-44 181.4 180 57.8
Gorai.010G179000 Gossypium raimondii HOM05D005739 ORTHO05D007740 8.2e-44 181.4 180 57.8
MBI18_g35070_MAGBIO Magnolia biondii HOM05D005739 ORTHO05D007740 1.1e-43 181.0 141 67.4
SalBow8G1417 Salvia bowleyana HOM05D005739 ORTHO05D007740 1.4e-43 180.6 181 56.9
PSO210G3635 Papaver somniferum HOM05D005739 ORTHO05D007740 1.8e-43 180.3 180 56.1
Rhsim02G0110500 Rhododendron simsii HOM05D005739 ORTHO05D007740 2.4e-43 179.9 181 58.0
Thecc.06G217300 Theobroma cacao HOM05D005739 ORTHO05D007740 3.1e-43 179.5 180 57.2
Thhalv10028765m.g Eutrema salsugineum HOM05D005739 ORTHO05D007740 4.1e-43 179.1 181 58.6
FAN25G0806 Fragaria x ananassa HOM05D005739 ORTHO05D007740 5.3e-43 178.7 180 55.6
vmacro15817 Vaccinium macrocarpon HOM05D005739 ORTHO05D007740 7.0e-43 178.3 181 56.4
Sc06g0010750 Simmondsia chinensis HOM05D005739 ORTHO05D007740 2.6e-42 176.4 181 56.9
Aa31LG9G9620 Aethionema arabicum HOM05D005739 ORTHO05D007740 7.7e-42 174.9 180 56.1
PGR004G1404 Punica granatum HOM05D005739 ORTHO05D007740 1.3e-41 174.1 180 55.6
Oeu063902.1 Olea europaea HOM05D005739 ORTHO05D007740 2.2e-41 173.3 180 56.7
DCAR_008137 Daucus carota HOM05D005739 ORTHO05D007740 8.5e-41 171.4 185 54.6
CDE11G0579 Ceratophyllum demersum HOM05D005739 ORTHO05D007740 1.1e-40 171.0 180 53.3
HanXRQChr16g0515931 Helianthus annuus HOM05D005739 ORTHO05D007740 3.2e-40 169.5 180 54.4
BcaB01g01842 Brassica carinata HOM05D005739 ORTHO05D007740 8.0e-39 164.9 180 54.4
HPP92_016297 Vanilla planifolia HOM05D005739 ORTHO05D007740 1.8e-38 163.7 181 53.0
HPP92_016316 Vanilla planifolia HOM05D005739 ORTHO05D007740 1.8e-38 163.7 181 53.0
ECA234G0122 Erigeron canadensis HOM05D005739 ORTHO05D007740 2.3e-38 163.3 180 53.3
ATR0752G010 Amborella trichopoda HOM05D005739 ORTHO05D007740 4.0e-38 162.5 180 52.2
Aqoxy1G03635 Aquilegia oxysepala HOM05D005739 ORTHO05D007740 1.5e-37 160.6 180 50.0
Hund23487 Selenicereus undatus HOM05D005739 ORTHO05D007740 2.6e-37 159.8 142 62.0
SEGI_12484 Sequoiadendron giganteum HOM05D005739 ORTHO05D007740 2.6e-37 159.8 183 51.4
Zm00001eb110820 Zea mays HOM05D005739 ORTHO05D007740 3.4e-37 159.5 181 50.3
Os07g0661000 Oryza sativa ssp. japonica HOM05D005739 ORTHO05D007740 2.8e-36 156.4 181 50.8
unitig_92.g28118 Utricularia gibba HOM05D005739 ORTHO05D007740 7.0e-35 151.8 142 57.0
SMO343G0036 Selaginella moellendorffii HOM05D005739 ORTHO05D007740 2.2e-28 130.2 143 55.2
CAN.G105.13 Capsicum annuum HOM05D005739 ORTHO05D007740 2.8e-28 129.8 110 61.8
arahy.Tifrunner.gnm1.ann1.H0U1UD Arachis hypogaea HOM05D005739 ORTHO05D007740 4.8e-28 129.0 125 57.6
Mapoly0023s0135 Marchantia polymorpha HOM05D005739 ORTHO05D007740 5.0e-25 119.0 156 46.8
Sopen10g001300 Solanum pennellii HOM05D005739 ORTHO05D007740 5.0e-25 119.0 101 61.4
arahy.Tifrunner.gnm1.ann1.39644B Arachis hypogaea HOM05D005739 ORTHO05D007740 1.5e-24 117.5 171 46.2
Pp3c11_7970 Physcomitrium patens HOM05D005739 ORTHO05D007740 3.6e-23 112.8 143 44.8
AagrBONN_evm.TU.Sc2ySwM_368.535 Anthoceros agrestis HOM05D005739 ORTHO05D007740 7.5e-21 105.1 145 47.6
arahy.Tifrunner.gnm1.ann1.Q9UH73 Arachis hypogaea HOM05D005739 ORTHO05D007740 7.5e-21 105.1 100 56.0
Cre03.g161000 Chlamydomonas reinhardtii HOM05D005739 ORTHO05D007740 4.4e-13 79.3 227 29.5
MCO11G903 Micromonas commoda HOM05D005739 ORTHO05D007740 9.8e-13 78.2 142 40.1


User provided reference genes

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