Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.0C3ILY Arachis hypogaea HOM05D000036 ORTHO05D015422 3.6e-56 221.5 122 100.0
arahy.Tifrunner.gnm1.ann1.C94DXU Arachis hypogaea HOM05D000036 ORTHO05D015422 1.5e-30 136.3 79 89.9
arahy.Tifrunner.gnm1.ann1.UR38H5 Arachis hypogaea HOM05D000009 ORTHO05D000008 1.5e-30 136.3 79 89.9
arahy.Tifrunner.gnm1.ann1.81ICF1 Arachis hypogaea HOM05D000036 ORTHO05D000095 3.4e-30 135.2 70 98.6
arahy.Tifrunner.gnm1.ann1.DIU0LM Arachis hypogaea HOM05D000036 ORTHO05D000095 3.4e-30 135.2 70 98.6
arahy.Tifrunner.gnm1.ann1.151STP Arachis hypogaea HOM05D000036 ORTHO05D000095 8.4e-29 130.6 70 95.7
CiPaw.07G111200 Carya illinoinensis HOM05D000036 ORTHO05D000095 1.5e-14 83.2 63 65.1
Lj5g0006452 Lotus japonicus HOM05D000036 ORTHO05D000095 1.5e-14 83.2 65 66.2
Haze_04965 Corylus avellana HOM05D000036 ORTHO05D000095 2.6e-14 82.4 70 58.6
Lalb_Chr02g0146481 Lupinus albus HOM05D000036 ORTHO05D000095 2.6e-14 82.4 70 62.9
Haze_04968 Corylus avellana HOM05D000036 ORTHO05D000095 3.4e-14 82.0 64 67.2
Glyma.02G016500 Glycine max HOM05D000036 ORTHO05D000095 4.5e-14 81.6 70 61.4
Phvul.007G218500 Phaseolus vulgaris HOM05D000036 ORTHO05D000095 7.6e-14 80.9 70 60.0
Cfa005886 Carpinus fangiana HOM05D000036 ORTHO05D000095 2.2e-13 79.3 70 55.7
QL12p027985 Quercus lobata HOM05D000036 ORTHO05D000095 2.9e-13 79.0 70 58.6
Cfa005885 Carpinus fangiana HOM05D000036 ORTHO05D000095 4.9e-13 78.2 64 64.1
Glyma.10G017100 Glycine max HOM05D000036 ORTHO05D000095 8.4e-13 77.4 64 62.5
Aqoxy2G02892 Aquilegia oxysepala HOM05D000036 ORTHO05D000095 1.9e-12 76.3 70 57.1
Lalb_Chr18g0046911 Lupinus albus HOM05D000036 ORTHO05D000095 1.9e-12 76.3 66 59.1
VMungo0720G2223 Vigna mungo HOM05D000036 ORTHO05D000095 1.9e-12 76.3 64 60.9
VMungo1383G1040 Vigna mungo HOM05D000036 ORTHO05D000095 1.9e-12 76.3 65 58.5
Hma1.2p1_0494F.1_g165390 Hydrangea macrophylla HOM05D000036 ORTHO05D000095 2.4e-12 75.9 70 58.6
Phvul.001G209400 Phaseolus vulgaris HOM05D000036 ORTHO05D000095 2.4e-12 75.9 70 54.3
Dinv33069 Davidia involucrata HOM05D000036 ORTHO05D000095 3.2e-12 75.5 107 45.8
Glyma.19G212600 Glycine max HOM05D000036 ORTHO05D000095 5.4e-12 74.7 66 56.1
Prupe.8G264100 Prunus persica HOM05D000036 ORTHO05D000095 5.4e-12 74.7 70 57.1
arahy.Tifrunner.gnm1.ann1.LDSG15 Arachis hypogaea HOM05D000036 ORTHO05D000095 7.1e-12 74.3 65 61.5
FAN27G0998 Fragaria x ananassa HOM05D000036 ORTHO05D000095 1.6e-11 73.2 119 37.0
Lj1g0028038 Lotus japonicus HOM05D000036 ORTHO05D000095 1.6e-11 73.2 70 55.7
FvH4_2g25980 Fragaria vesca HOM05D000036 ORTHO05D000095 2.1e-11 72.8 119 37.0
FAN20G2349 Fragaria x ananassa HOM05D000036 ORTHO05D000095 2.1e-11 72.8 119 37.0
FAN24G0892 Fragaria x ananassa HOM05D000036 ORTHO05D000095 2.1e-11 72.8 119 37.0
Hma1.2p1_1482F.1_g286190 Hydrangea macrophylla HOM05D000036 ORTHO05D000095 2.1e-11 72.8 68 54.4
MBI18_g37155_MAGBIO Magnolia biondii HOM05D000036 ORTHO05D000095 2.1e-11 72.8 69 53.6
MD11G1307200 Malus domestica HOM05D000036 ORTHO05D000095 3.5e-11 72.0 66 56.1
Rhsim13G0008700 Rhododendron simsii HOM05D000120 ORTHO05D000068 3.5e-11 72.0 70 54.3
TPR.G9629 Trifolium pratense HOM05D000036 ORTHO05D000095 4.6e-11 71.6 69 49.3
Aqoxy2G02893 Aquilegia oxysepala HOM05D000036 ORTHO05D000095 6.0e-11 71.2 70 57.1
FAN15G0438 Fragaria x ananassa HOM05D000036 ORTHO05D000095 6.0e-11 71.2 119 36.1
Cc11_g04900 Coffea canephora HOM05D000036 ORTHO05D000095 7.9e-11 70.9 69 52.2
Nitab4.5_0001544g0040 Nicotiana tabacum HOM05D000036 ORTHO05D000095 7.9e-11 70.9 71 59.2
CSS0044745 Camellia sinensis var. sinensis HOM05D000036 ORTHO05D000095 1.0e-10 70.5 70 50.0
Psat3g021520 Pisum sativum HOM05D000036 ORTHO05D000095 1.3e-10 70.1 69 49.3
Cc11_g04910 Coffea canephora HOM05D000036 ORTHO05D000095 1.8e-10 69.7 69 52.2
Nn3g21542 Nelumbo nucifera HOM05D000036 ORTHO05D000095 1.8e-10 69.7 68 55.9
CiPaw.08G093200 Carya illinoinensis HOM05D000036 ORTHO05D000095 2.3e-10 69.3 68 54.4
TAR216G0003 Trochodendron aralioides HOM05D000036 ORTHO05D000095 2.3e-10 69.3 70 51.4
PGSC0003DMG402017934 Solanum tuberosum HOM05D000036 ORTHO05D000095 3.9e-10 68.6 80 50.0
GSVIVG01028041001 Vitis vinifera HOM05D000036 ORTHO05D000095 3.9e-10 68.6 68 52.9
Solyc06g009190.4 Solanum lycopersicum HOM05D000036 ORTHO05D000095 5.1e-10 68.2 80 50.0
Sopen06g003960 Solanum pennellii HOM05D000036 ORTHO05D000095 5.1e-10 68.2 80 50.0
Actinidia21436 Actinidia chinensis HOM05D000036 ORTHO05D000095 1.5e-09 66.6 70 48.6
Duzib138G0570 Durio zibethinus HOM05D000036 ORTHO05D000095 1.5e-09 66.6 83 43.4
Medtr7g108905 Medicago truncatula HOM05D000036 ORTHO05D000095 2.5e-09 65.9 69 47.8
Ciclev10023723m.g Citrus clementina HOM05D000036 ORTHO05D000095 4.3e-09 65.1 64 50.0
Nitab4.5_0000116g0370 Nicotiana tabacum HOM05D000036 ORTHO05D000095 5.6e-09 64.7 68 54.4
Nitab4.5_0008214g0010 Nicotiana tabacum HOM05D000036 ORTHO05D000095 5.6e-09 64.7 70 52.9
SGA_v2.0_scaffold1G00350 Striga asiatica HOM05D000036 ORTHO05D000095 5.6e-09 64.7 70 48.6
PSO407G0236 Papaver somniferum HOM05D000036 ORTHO05D000095 7.4e-09 64.3 68 48.5
unitig_26.g10177 Utricularia gibba HOM05D000120 ORTHO05D000068 7.4e-09 64.3 68 45.6
Nn4g25754 Nelumbo nucifera HOM05D000036 ORTHO05D000095 9.6e-09 63.9 70 45.7
Thecc.01G303800 Theobroma cacao HOM05D000036 ORTHO05D000095 9.6e-09 63.9 64 45.3
MSTRG.18137 Avicennia marina HOM05D000036 ORTHO05D000095 1.3e-08 63.5 69 44.9
Solyc09g075350.4 Solanum lycopersicum HOM05D000036 ORTHO05D000095 1.6e-08 63.2 68 51.5
PGSC0003DMG400031791 Solanum tuberosum HOM05D000036 ORTHO05D000095 1.6e-08 63.2 68 51.5
RcHm_v2.0_Chr6g0294341 Rosa chinensis HOM05D000036 ORTHO05D000095 3.7e-08 62.0 93 37.6
Cpa.g.sc151.19 Carica papaya HOM05D000036 ORTHO05D000095 4.8e-08 61.6 68 50.0
Sopen09g030120 Solanum pennellii HOM05D000036 ORTHO05D000095 6.2e-08 61.2 68 50.0
Atru.chr5.1106 Acer truncatum HOM05D000036 ORTHO05D000095 8.1e-08 60.8 68 48.5
Peaxi162Scf00399g00041 Petunia axillaris HOM05D000036 ORTHO05D000095 1.1e-07 60.5 94 41.5
Lj1E22G3 Lonicera japonica HOM05D000036 ORTHO05D015422 1.4e-07 60.1 70 47.1
Peaxi162Scf00001g00373 Petunia axillaris HOM05D000036 ORTHO05D000095 1.4e-07 60.1 68 52.9
CAN.G1280.10 Capsicum annuum HOM05D000036 ORTHO05D000095 1.8e-07 59.7 72 54.2
Gorai.001G140500 Gossypium raimondii HOM05D000036 ORTHO05D000095 1.8e-07 59.7 83 42.2
Gohir.A07G125900 Gossypium hirsutum HOM05D000036 ORTHO05D000095 2.4e-07 59.3 83 41.0
Peaxi162Scf00140g01335 Petunia axillaris HOM05D000036 ORTHO05D000095 5.3e-07 58.2 66 48.5
PGR119G0331 Punica granatum HOM05D000036 ORTHO05D000095 6.9e-07 57.8 70 41.4
Gohir.D07G130000 Gossypium hirsutum HOM05D000036 ORTHO05D000095 9.0e-07 57.4 83 41.0
Oeu011464.2 Olea europaea HOM05D000036 ORTHO05D000397 9.0e-07 57.4 68 44.1
HanXRQChr10g0284901 Helianthus annuus HOM05D000036 ORTHO05D000095 1.2e-06 57.0 68 45.6
Lsat_1_v5_gn_9_2560 Lactuca sativa HOM05D000036 ORTHO05D000095 1.2e-06 57.0 67 46.3
Migut.D00137 Erythranthe guttata HOM05D000036 ORTHO05D015422 2.0e-06 56.2 64 43.8
Nitab4.5_0002820g0010 Nicotiana tabacum HOM05D000036 ORTHO05D000095 2.0e-06 56.2 68 45.6
ECA236G0922 Erigeron canadensis HOM05D000036 ORTHO05D000095 2.6e-06 55.8 68 42.6
Gohir.D11G118500 Gossypium hirsutum HOM05D000036 ORTHO05D000095 4.5e-06 55.1 83 38.6
TWI14G0017 Tripterygium wilfordii HOM05D000036 ORTHO05D000095 4.5e-06 55.1 64 35.9
Gorai.007G127000 Gossypium raimondii HOM05D000036 ORTHO05D000095 5.8e-06 54.7 83 38.6
Lsat_1_v5_gn_8_164460 Lactuca sativa HOM05D000036 ORTHO05D000095 5.8e-06 54.7 68 44.1
TWI59G0986 Tripterygium wilfordii HOM05D000036 ORTHO05D000095 5.8e-06 54.7 68 33.8
MELO3C015963.2 Cucumis melo HOM05D000036 ORTHO05D000095 7.6e-06 54.3 68 41.2
Gohir.A11G113500 Gossypium hirsutum HOM05D000036 ORTHO05D000095 7.6e-06 54.3 63 42.9
CAN.G472.25 Capsicum annuum HOM05D000036 ORTHO05D000095 1.0e-05 53.9 70 42.9


User provided reference genes

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