Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.0AYN0M Arachis hypogaea HOM05D008215 ORTHO05D004366 2.1e-49 198.7 104 100.0
arahy.Tifrunner.gnm1.ann1.1P551D Arachis hypogaea HOM05D008215 ORTHO05D004366 1.8e-48 195.7 104 97.1
arahy.Tifrunner.gnm1.ann1.U9CRBQ Arachis hypogaea HOM05D008215 ORTHO05D004366 1.1e-45 186.4 99 97.0
arahy.Tifrunner.gnm1.ann1.P1RV09 Arachis hypogaea HOM05D008215 ORTHO05D004366 3.2e-45 184.9 99 96.0
arahy.Tifrunner.gnm1.ann1.3DHQ20 Arachis hypogaea HOM05D008215 ORTHO05D004366 4.2e-45 184.5 101 94.1
arahy.Tifrunner.gnm1.ann1.01UHHT Arachis hypogaea HOM05D008215 ORTHO05D004366 2.7e-44 181.8 100 95.0
arahy.Tifrunner.gnm1.ann1.J3W7RL Arachis hypogaea HOM05D008215 ORTHO05D004366 4.6e-44 181.0 99 94.9
arahy.Tifrunner.gnm1.ann1.1NHG9F Arachis hypogaea HOM05D008215 ORTHO05D004366 6.0e-44 180.6 104 90.4
arahy.Tifrunner.gnm1.ann1.P21766 Arachis hypogaea HOM05D008215 ORTHO05D004366 1.7e-43 179.1 101 91.1
arahy.Tifrunner.gnm1.ann1.KE1U92 Arachis hypogaea HOM05D008215 ORTHO05D004366 3.9e-43 177.9 99 92.9
arahy.Tifrunner.gnm1.ann1.PJX35B Arachis hypogaea HOM05D008215 ORTHO05D004366 3.9e-43 177.9 100 92.0
arahy.Tifrunner.gnm1.ann1.N5TKCQ Arachis hypogaea HOM05D008215 ORTHO05D004366 8.7e-43 176.8 109 87.2
arahy.Tifrunner.gnm1.ann1.15M8G9 Arachis hypogaea HOM05D008215 ORTHO05D004366 1.5e-42 176.0 100 91.0
arahy.Tifrunner.gnm1.ann1.U6CLNF Arachis hypogaea HOM05D008215 ORTHO05D004366 3.3e-42 174.9 100 91.0
arahy.Tifrunner.gnm1.ann1.8PL5QC Arachis hypogaea HOM05D008215 ORTHO05D004366 9.6e-42 173.3 100 90.0
arahy.Tifrunner.gnm1.ann1.N3K4CS Arachis hypogaea HOM05D008215 ORTHO05D004366 2.4e-40 168.7 91 93.4
arahy.Tifrunner.gnm1.ann1.VK8Z6X Arachis hypogaea HOM05D008215 ORTHO05D004366 2.6e-39 165.2 100 87.0
arahy.Tifrunner.gnm1.ann1.TAU4F3 Arachis hypogaea HOM05D008215 ORTHO05D004366 1.3e-38 162.9 92 91.3
arahy.Tifrunner.gnm1.ann1.1L25KB Arachis hypogaea HOM05D008215 ORTHO05D012964 2.1e-33 145.6 91 84.6
arahy.Tifrunner.gnm1.ann1.XH4RCS Arachis hypogaea HOM05D008215 ORTHO05D004366 2.1e-33 145.6 77 97.4
arahy.Tifrunner.gnm1.ann1.281UCZ Arachis hypogaea HOM05D008215 ORTHO05D004366 2.8e-33 145.2 78 94.9
arahy.Tifrunner.gnm1.ann1.8QJJ59 Arachis hypogaea HOM05D008215 ORTHO05D004366 2.8e-33 145.2 78 94.9
arahy.Tifrunner.gnm1.ann1.UC8GQG Arachis hypogaea HOM05D008215 ORTHO05D004366 2.8e-33 145.2 78 94.9
arahy.Tifrunner.gnm1.ann1.8K6P1P Arachis hypogaea HOM05D008215 ORTHO05D004366 3.7e-33 144.8 78 93.6
arahy.Tifrunner.gnm1.ann1.N6DDSD Arachis hypogaea HOM05D008215 ORTHO05D004366 2.4e-32 142.1 77 94.8
arahy.Tifrunner.gnm1.ann1.RJ0BEJ Arachis hypogaea HOM05D008215 ORTHO05D004366 4.0e-32 141.4 78 92.3
arahy.Tifrunner.gnm1.ann1.08U2RY Arachis hypogaea HOM05D008215 ORTHO05D004366 2.1e-28 129.0 78 85.9
arahy.Tifrunner.gnm1.ann1.IYQ4QW Arachis hypogaea HOM05D008215 ORTHO05D004366 4.6e-28 127.9 67 97.0
arahy.Tifrunner.gnm1.ann1.J7IPJF Arachis hypogaea HOM05D008215 ORTHO05D004366 4.6e-28 127.9 67 97.0
arahy.Tifrunner.gnm1.ann1.N8KI2G Arachis hypogaea HOM05D008215 ORTHO05D004366 4.6e-28 127.9 67 97.0
arahy.Tifrunner.gnm1.ann1.VI83PH Arachis hypogaea HOM05D008215 ORTHO05D004366 4.6e-28 127.9 67 97.0
arahy.Tifrunner.gnm1.ann1.AZ2039 Arachis hypogaea HOM05D008215 ORTHO05D004366 1.3e-27 126.3 67 95.5
arahy.Tifrunner.gnm1.ann1.PGWD8S Arachis hypogaea HOM05D008215 ORTHO05D004366 1.3e-27 126.3 67 95.5
arahy.Tifrunner.gnm1.ann1.R9U7QG Arachis hypogaea HOM05D008215 ORTHO05D004366 1.3e-27 126.3 67 95.5
arahy.Tifrunner.gnm1.ann1.X4FCWR Arachis hypogaea HOM05D008215 ORTHO05D004366 1.3e-27 126.3 67 94.0
arahy.Tifrunner.gnm1.ann1.53FFQK Arachis hypogaea HOM05D008215 ORTHO05D004366 2.3e-27 125.6 67 95.5
arahy.Tifrunner.gnm1.ann1.BH3K81 Arachis hypogaea HOM05D008215 ORTHO05D004366 2.3e-27 125.6 67 95.5
arahy.Tifrunner.gnm1.ann1.QL13TW Arachis hypogaea HOM05D008215 ORTHO05D004366 2.3e-27 125.6 67 97.0
arahy.Tifrunner.gnm1.ann1.KS76FR Arachis hypogaea HOM05D008215 ORTHO05D004366 3.0e-27 125.2 67 95.5
arahy.Tifrunner.gnm1.ann1.NAL5BM Arachis hypogaea HOM05D008215 ORTHO05D004366 3.0e-27 125.2 67 94.0
arahy.Tifrunner.gnm1.ann1.0NID34 Arachis hypogaea HOM05D008215 ORTHO05D004366 5.1e-27 124.4 67 95.5
arahy.Tifrunner.gnm1.ann1.C7S3TB Arachis hypogaea HOM05D008215 ORTHO05D004366 6.7e-27 124.0 67 94.0
arahy.Tifrunner.gnm1.ann1.WUU67S Arachis hypogaea HOM05D008215 ORTHO05D004366 6.7e-27 124.0 67 95.5
arahy.Tifrunner.gnm1.ann1.06KY74 Arachis hypogaea HOM05D008215 ORTHO05D004366 8.7e-27 123.6 67 94.0
arahy.Tifrunner.gnm1.ann1.0B2DCJ Arachis hypogaea HOM05D008215 ORTHO05D004366 8.7e-27 123.6 67 94.0
arahy.Tifrunner.gnm1.ann1.4R5VT1 Arachis hypogaea HOM05D008215 ORTHO05D004366 1.5e-26 122.9 67 92.5
arahy.Tifrunner.gnm1.ann1.TNWQ22 Arachis hypogaea HOM05D008215 ORTHO05D004366 1.5e-26 122.9 67 94.0
arahy.Tifrunner.gnm1.ann1.Q5FG1U Arachis hypogaea HOM05D008215 ORTHO05D004366 3.3e-26 121.7 67 94.0
arahy.Tifrunner.gnm1.ann1.65QQ6U Arachis hypogaea HOM05D008215 ORTHO05D004366 5.7e-26 120.9 67 92.5
arahy.Tifrunner.gnm1.ann1.72L17L Arachis hypogaea HOM05D008215 ORTHO05D004366 7.4e-26 120.6 67 91.0
arahy.Tifrunner.gnm1.ann1.AKXA3Q Arachis hypogaea HOM05D008215 ORTHO05D004366 7.4e-26 120.6 67 91.0
arahy.Tifrunner.gnm1.ann1.0W0WAG Arachis hypogaea HOM05D006566 ORTHO05D004366 9.6e-26 120.2 101 69.3
arahy.Tifrunner.gnm1.ann1.06JWCS Arachis hypogaea HOM05D008215 ORTHO05D004366 1.3e-25 119.8 67 92.5
arahy.Tifrunner.gnm1.ann1.1VUR4R Arachis hypogaea HOM05D006566 ORTHO05D004366 1.6e-25 119.4 100 69.0
arahy.Tifrunner.gnm1.ann1.GGCI06 Arachis hypogaea HOM05D008215 ORTHO05D004366 1.6e-25 119.4 67 91.0
arahy.Tifrunner.gnm1.ann1.EFLB64 Arachis hypogaea HOM05D008215 ORTHO05D004366 2.8e-25 118.6 67 91.0
arahy.Tifrunner.gnm1.ann1.JH7UH9 Arachis hypogaea HOM05D006566 ORTHO05D004366 6.2e-25 117.5 101 67.3
arahy.Tifrunner.gnm1.ann1.696ALD Arachis hypogaea HOM05D008215 ORTHO05D004366 5.3e-24 114.4 101 65.3
arahy.Tifrunner.gnm1.ann1.ZA5TXM Arachis hypogaea HOM05D008215 ORTHO05D004366 1.5e-23 112.8 67 88.1
arahy.Tifrunner.gnm1.ann1.SD125V Arachis hypogaea HOM05D006566 ORTHO05D004366 2.0e-23 112.5 101 64.4
arahy.Tifrunner.gnm1.ann1.38ZYM9 Arachis hypogaea HOM05D008215 ORTHO05D004366 3.4e-23 111.7 100 66.0
arahy.Tifrunner.gnm1.ann1.V6LEH2 Arachis hypogaea HOM05D008215 ORTHO05D004366 3.8e-22 108.2 78 76.9
arahy.Tifrunner.gnm1.ann1.QN60Y2 Arachis hypogaea HOM05D008215 ORTHO05D087623 1.4e-21 106.3 56 96.4
arahy.Tifrunner.gnm1.ann1.Y6ARBS Arachis hypogaea HOM05D008215 ORTHO05D004366 3.2e-21 105.1 60 91.7
VMungo1215G1614 Vigna mungo HOM05D006566 ORTHO05D004366 4.2e-21 104.8 101 59.4
Glyma.17G093800 Glycine max HOM05D006566 ORTHO05D004366 5.5e-21 104.4 101 60.4
Glyma.05G033200 Glycine max HOM05D006566 ORTHO05D004366 9.3e-21 103.6 101 60.4
arahy.Tifrunner.gnm1.ann1.USZI6Q Arachis hypogaea HOM05D006566 ORTHO05D004366 2.1e-20 102.4 101 60.4
Phvul.003G196400 Phaseolus vulgaris HOM05D006566 ORTHO05D004366 3.0e-19 98.6 101 57.4
Psat4g055720 Pisum sativum HOM05D006566 ORTHO05D004366 1.1e-18 96.7 103 60.2
Lj4g0023975 Lotus japonicus HOM05D006566 ORTHO05D004366 5.7e-18 94.4 101 56.4
Lalb_Chr07g0182501 Lupinus albus HOM05D006566 ORTHO05D004366 5.7e-18 94.4 101 57.4
arahy.Tifrunner.gnm1.ann1.YEU6LJ Arachis hypogaea HOM05D006566 ORTHO05D004366 7.4e-18 94.0 91 61.5
TPR.G38369 Trifolium pratense HOM05D006566 ORTHO05D004366 9.7e-18 93.6 102 57.8
arahy.Tifrunner.gnm1.ann1.F39Z70 Arachis hypogaea HOM05D008215 ORTHO05D004366 2.8e-17 92.0 50 92.0
arahy.Tifrunner.gnm1.ann1.LIW0MX Arachis hypogaea HOM05D008215 ORTHO05D004366 3.7e-17 91.7 50 92.0
arahy.Tifrunner.gnm1.ann1.Y4Q1DU Arachis hypogaea HOM05D008215 ORTHO05D012964 3.7e-17 91.7 73 75.3
Ca_21878_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 3.1e-16 88.6 103 55.3
Ca_21886_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 3.1e-16 88.6 103 55.3
CiPaw.12G022600 Carya illinoinensis HOM05D006566 ORTHO05D004366 4.5e-15 84.7 101 55.4
Haze_07429 Corylus avellana HOM05D006566 ORTHO05D004366 2.5e-13 79.0 100 50.0
Atru.chr9.2391 Acer truncatum HOM05D006566 ORTHO05D004366 9.4e-13 77.0 101 48.5
Ciclev10023573m.g Citrus clementina HOM05D006566 ORTHO05D004366 9.4e-13 77.0 100 50.0
Nn3g17040 Nelumbo nucifera HOM05D006566 ORTHO05D004366 1.2e-12 76.6 101 44.6
Cfa019059 Carpinus fangiana HOM05D006566 ORTHO05D004366 2.1e-12 75.9 100 49.0
Hma1.2p1_0572F.1_g181020 Hydrangea macrophylla HOM05D006566 ORTHO05D004366 6.1e-12 74.3 100 46.0
QL10p013685 Quercus lobata HOM05D006566 ORTHO05D004366 7.9e-12 73.9 99 49.5
GSVIVG01007834001 Vitis vinifera HOM05D006566 ORTHO05D004366 7.9e-12 73.9 100 45.0
Rhsim12G0161000 Rhododendron simsii HOM05D006566 ORTHO05D004366 3.0e-11 72.0 100 45.0
TAR374G0618 Trochodendron aralioides HOM05D006566 ORTHO05D004366 3.0e-11 72.0 100 45.0
Thecc.03G002700 Theobroma cacao HOM05D006566 ORTHO05D004366 1.5e-10 69.7 101 47.5
Gohir.D08G106700 Gossypium hirsutum HOM05D006566 ORTHO05D004366 2.0e-10 69.3 101 45.5
Gorai.004G113800 Gossypium raimondii HOM05D006566 ORTHO05D004366 2.0e-10 69.3 101 45.5
Actinidia34964 Actinidia chinensis HOM05D006566 ORTHO05D004366 3.3e-10 68.6 100 45.0
Manes.06G099800 Manihot esculenta HOM05D006566 ORTHO05D004366 4.3e-10 68.2 100 47.0
ECA246G4585 Erigeron canadensis HOM05D006566 ORTHO05D004366 7.4e-10 67.4 100 43.0
CSS0033214 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 9.7e-10 67.0 100 44.0
CSS0042495 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 9.7e-10 67.0 100 44.0
Prupe.5G180400 Prunus persica HOM05D006566 ORTHO05D004366 1.3e-09 66.6 100 44.0
vmacro16583 Vaccinium macrocarpon HOM05D006566 ORTHO05D004366 1.3e-09 66.6 101 43.6
HanXRQChr14g0438811 Helianthus annuus HOM05D006566 ORTHO05D004366 6.3e-09 64.3 100 42.0
MD14G1188300 Malus domestica HOM05D006566 ORTHO05D004366 6.3e-09 64.3 102 43.1
MSTRG.23070 Avicennia marina HOM05D006566 ORTHO05D004366 1.1e-08 63.5 100 42.0
Lsat_1_v5_gn_5_18061 Lactuca sativa HOM05D006566 ORTHO05D004366 1.1e-08 63.5 101 41.6
SGA_v2.0_scaffold56G20079 Striga asiatica HOM05D006566 ORTHO05D004366 1.1e-08 63.5 99 45.5
COL.COLO4_21450 Corchorus olitorius HOM05D006566 ORTHO05D004366 1.8e-08 62.8 101 42.6
Nitab4.5_0003577g0010 Nicotiana tabacum HOM05D006566 ORTHO05D004366 2.4e-08 62.4 102 42.2
Migut.I00099 Erythranthe guttata HOM05D006566 ORTHO05D004366 3.1e-08 62.0 102 40.2
Nitab4.5_0000026g0410 Nicotiana tabacum HOM05D006566 ORTHO05D004366 3.1e-08 62.0 102 42.2
PGR044G1407 Punica granatum HOM05D006566 ORTHO05D004366 3.1e-08 62.0 100 43.0
arahy.Tifrunner.gnm1.ann1.7E0SBW Arachis hypogaea HOM05D008215 ORTHO05D004366 4.1e-08 61.6 52 63.5
CANSAT80G0898 Cannabis sativa HOM05D006566 ORTHO05D004366 5.3e-08 61.2 92 44.6
Cpa.g.sc35.28 Carica papaya HOM05D006566 ORTHO05D004366 5.3e-08 61.2 100 43.0
RcHm_v2.0_Chr7g0179841 Rosa chinensis HOM05D006566 ORTHO05D004366 6.9e-08 60.8 100 42.0
Peaxi162Scf00496g00038 Petunia axillaris HOM05D006566 ORTHO05D004366 9.1e-08 60.5 103 41.7
Eucgr.K02884 Eucalyptus grandis HOM05D006566 ORTHO05D004366 1.2e-07 60.1 99 41.4
MD06G1182300 Malus domestica HOM05D006566 ORTHO05D004366 1.2e-07 60.1 102 41.2
Potri.015G070100 Populus trichocarpa HOM05D006566 ORTHO05D004366 1.2e-07 60.1 99 42.4
CsaV3_1G008150 Cucumis sativus L. HOM05D006566 ORTHO05D004366 2.6e-07 58.9 103 45.6
Sed0021978 Sechium edule HOM05D006566 ORTHO05D004366 2.6e-07 58.9 102 45.1
Actinidia19077 Actinidia chinensis HOM05D006566 ORTHO05D004366 3.4e-07 58.5 100 40.0
FvH4_5g16290 Fragaria vesca HOM05D006566 ORTHO05D004366 5.9e-07 57.8 100 41.0
FAN18G1223 Fragaria x ananassa HOM05D006566 ORTHO05D004366 5.9e-07 57.8 100 41.0
Oeu005686.3 Olea europaea HOM05D006566 ORTHO05D004366 5.9e-07 57.8 77 45.5
Lj5A120T53 Lonicera japonica HOM05D006566 ORTHO05D004366 7.7e-07 57.4 85 41.2
Medtr4g106550 Medicago truncatula HOM05D006566 ORTHO05D004366 1.0e-06 57.0 102 44.1
Sabra15G0094500 Salix brachista HOM05D006566 ORTHO05D004366 1.0e-06 57.0 99 41.4
SalBow5G4198 Salvia bowleyana HOM05D006566 ORTHO05D004366 1.0e-06 57.0 100 37.0
Sabra15G0095700 Salix brachista HOM05D006566 ORTHO05D004366 1.3e-06 56.6 99 41.4
THA.LOC104821469 Tarenaya hassleriana HOM05D006566 ORTHO05D004366 1.3e-06 56.6 101 39.6
DCAR_026101 Daucus carota HOM05D006566 ORTHO05D004366 2.9e-06 55.5 85 38.8
CAN.G1932.4 Capsicum annuum HOM05D006566 ORTHO05D004366 3.8e-06 55.1 101 38.6
FAN04G3214 Fragaria x ananassa HOM05D006566 ORTHO05D004366 8.5e-06 53.9 100 40.0
FAN13G1045 Fragaria x ananassa HOM05D006566 ORTHO05D004366 8.5e-06 53.9 100 40.0
Solyc12g027740.3 Solanum lycopersicum HOM05D006566 ORTHO05D004366 8.5e-06 53.9 101 37.6


User provided reference genes

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