Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.09DLU7 Arachis hypogaea HOM05D006591 ORTHO05D007861 1.5e-48 197.2 247 100.0
arahy.Tifrunner.gnm1.ann1.74ATFD Arachis hypogaea HOM05D006591 ORTHO05D007861 1.1e-38 164.5 236 90.3
TPR.G2283 Trifolium pratense HOM05D006591 ORTHO05D007861 1.2e-26 124.4 114 59.6
Glyma.02G113900 Glycine max HOM05D006591 ORTHO05D007861 1.6e-26 124.0 119 64.7
Ciclev10032613m.g Citrus clementina HOM05D006591 ORTHO05D007861 2.3e-25 120.2 115 73.0
Glyma.01G055500 Glycine max HOM05D006591 ORTHO05D007861 3.0e-25 119.8 121 72.7
Lj2g0025600 Lotus japonicus HOM05D006591 ORTHO05D007861 3.9e-25 119.4 123 70.7
Phvul.002G068900 Phaseolus vulgaris HOM05D006591 ORTHO05D007861 3.9e-25 119.4 118 58.5
Psat2g128080 Pisum sativum HOM05D006591 ORTHO05D007861 8.7e-25 118.2 121 68.6
QL03p070967 Quercus lobata HOM05D006591 ORTHO05D007861 8.7e-25 118.2 120 56.7
Lalb_Chr10g0098581 Lupinus albus HOM05D006591 ORTHO05D007861 3.3e-24 116.3 117 73.5
PGSC0003DMG400028326 Solanum tuberosum HOM05D006591 ORTHO05D007861 1.6e-23 114.0 106 75.5
PGR119G1238 Punica granatum HOM05D006591 ORTHO05D007861 2.8e-23 113.2 115 55.7
Dinv16706 Davidia involucrata HOM05D006591 ORTHO05D007861 4.8e-23 112.5 121 70.2
Sopen05g007420 Solanum pennellii HOM05D006591 ORTHO05D007861 6.2e-23 112.1 106 73.6
VMungo1215G0675 Vigna mungo HOM05D006591 ORTHO05D007861 6.2e-23 112.1 115 70.4
Peaxi162Scf00314g00027 Petunia axillaris HOM05D006591 ORTHO05D007861 8.1e-23 111.7 110 65.5
CANSAT64G0984 Cannabis sativa HOM05D006591 ORTHO05D007861 1.1e-22 111.3 121 67.8
Solyc05g012590.4 Solanum lycopersicum HOM05D006591 ORTHO05D007861 1.8e-22 110.5 106 58.5
Cpa.g.sc1.95 Carica papaya HOM05D006591 ORTHO05D007861 3.1e-22 109.8 117 53.0
COL.COLO4_05797 Corchorus olitorius HOM05D006591 ORTHO05D007861 3.1e-22 109.8 106 60.4
TPR.G24426 Trifolium pratense HOM05D006591 ORTHO05D007861 4.0e-22 109.4 114 71.1
GSVIVG01012181001 Vitis vinifera HOM05D006591 ORTHO05D007861 4.0e-22 109.4 118 66.1
MELO3C002930.2 Cucumis melo HOM05D006591 ORTHO05D007861 6.9e-22 108.6 120 53.3
Medtr5g043640 Medicago truncatula HOM05D006591 ORTHO05D007861 2.0e-21 107.1 113 72.6
TWI79G1606 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 2.0e-21 107.1 120 63.3
Gorai.009G326200 Gossypium raimondii HOM05D006591 ORTHO05D007861 5.8e-21 105.5 106 58.5
CiPaw.06G090100 Carya illinoinensis HOM05D006591 ORTHO05D007861 7.6e-21 105.1 120 68.3
CSS0032544 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.7e-20 104.0 124 51.6
Gohir.D05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 1.7e-20 104.0 106 57.5
vmacro16368 Vaccinium macrocarpon HOM05D006591 ORTHO05D007861 1.7e-20 104.0 114 53.5
Actinidia19919 Actinidia chinensis HOM05D006591 ORTHO05D007861 2.2e-20 103.6 122 50.8
Cfa008903 Carpinus fangiana HOM05D006591 ORTHO05D007861 2.2e-20 103.6 120 65.0
DCAR_027452 Daucus carota HOM05D006591 ORTHO05D007861 2.9e-20 103.2 117 62.4
Gohir.A05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 2.9e-20 103.2 106 56.6
Atru.chr11.1685 Acer truncatum HOM05D006591 ORTHO05D007861 4.9e-20 102.4 122 64.8
Prupe.1G282400 Prunus persica HOM05D006591 ORTHO05D007861 8.4e-20 101.7 121 66.1
Lj3C1032T3 Lonicera japonica HOM05D006591 ORTHO05D007861 1.1e-19 101.3 122 63.1
Hund25197 Selenicereus undatus HOM05D006591 ORTHO05D007861 2.5e-19 100.1 110 53.6
HanXRQChr17g0545461 Helianthus annuus HOM05D006591 ORTHO05D007861 4.2e-19 99.4 111 61.3
Haze_11932 Corylus avellana HOM05D006591 ORTHO05D007861 7.1e-19 98.6 145 44.8
CAN.G1340.9 Capsicum annuum HOM05D006591 ORTHO05D007861 2.7e-18 96.7 101 68.3
Nn4g23331 Nelumbo nucifera HOM05D006591 ORTHO05D007861 2.7e-18 96.7 121 60.3
Duzib268G0337 Durio zibethinus HOM05D006591 ORTHO05D007861 3.5e-18 96.3 102 56.9
MD16G1064400 Malus domestica HOM05D006591 ORTHO05D007861 3.5e-18 96.3 119 63.9
TWI75G0359 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 6.0e-18 95.5 120 60.8
Ca_04911_v3 Cicer arietinum L. HOM05D006591 ORTHO05D007861 7.9e-18 95.1 121 64.5
MD13G1065800 Malus domestica HOM05D006591 ORTHO05D007861 7.9e-18 95.1 119 62.2
BcaC04g21487 Brassica carinata HOM05D006591 ORTHO05D007861 1.0e-17 94.7 115 47.8
C09p31230 Brassica napus HOM05D006591 ORTHO05D007861 1.0e-17 94.7 115 47.8
BolC9t55979H Brassica oleracea HOM05D006591 ORTHO05D007861 1.0e-17 94.7 115 47.8
Manes.05G107800 Manihot esculenta HOM05D006591 ORTHO05D007861 1.3e-17 94.4 113 65.5
Cc11_g12350 Coffea canephora HOM05D006591 ORTHO05D007861 2.3e-17 93.6 99 54.5
Rhsim12G0134100 Rhododendron simsii HOM05D006591 ORTHO05D007861 2.3e-17 93.6 151 43.0
Sc11g0002290 Simmondsia chinensis HOM05D006591 ORTHO05D007861 2.3e-17 93.6 115 64.3
SGA_v2.0_scaffold287G47153 Striga asiatica HOM05D006591 ORTHO05D007861 2.3e-17 93.6 106 71.7
CSS0024373 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 3.0e-17 93.2 83 62.7
CsaV3_5G025480 Cucumis sativus L. HOM05D006591 ORTHO05D007861 5.1e-17 92.4 120 62.5
Oeu028261.1 Olea europaea HOM05D006591 ORTHO05D007861 5.1e-17 92.4 116 59.5
Thecc.02G335700 Theobroma cacao HOM05D006591 ORTHO05D007861 1.9e-16 90.5 120 64.2
Lsat_1_v5_gn_3_56260 Lactuca sativa HOM05D006591 ORTHO05D007861 2.5e-16 90.1 116 63.8
Potri.010G161300 Populus trichocarpa HOM05D006591 ORTHO05D007861 2.5e-16 90.1 109 66.1
ECA246G1963 Erigeron canadensis HOM05D006591 ORTHO05D007861 3.3e-16 89.7 114 62.3
RcHm_v2.0_Chr4g0438821 Rosa chinensis HOM05D006591 ORTHO05D007861 5.7e-16 89.0 109 66.1
CSS0002938 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 7.4e-16 88.6 92 57.6
CSS0020090 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 7.4e-16 88.6 92 57.6
Sabra10G0122800 Salix brachista HOM05D006591 ORTHO05D007861 7.4e-16 88.6 110 66.4
Thhalv10004832m.g Eutrema salsugineum HOM05D006591 ORTHO05D007861 9.6e-16 88.2 115 47.8
THA.LOC104801815 Tarenaya hassleriana HOM05D006591 ORTHO05D007861 9.6e-16 88.2 109 61.5
TAR374G1558 Trochodendron aralioides HOM05D006591 ORTHO05D007861 1.3e-15 87.8 119 57.1
Actinidia31944 Actinidia chinensis HOM05D006591 ORTHO05D007861 1.6e-15 87.4 116 48.3
MSTRG.2323 Avicennia marina HOM05D006591 ORTHO05D007861 1.6e-15 87.4 102 65.7
CSS0029304 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 2.1e-15 87.0 92 56.5
FAN22G1196 Fragaria x ananassa HOM05D006591 ORTHO05D007861 6.3e-15 85.5 110 64.5
BraA09t38037Z Brassica rapa HOM05D006591 ORTHO05D007861 1.1e-14 84.7 116 56.9
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 1.8e-14 84.0 98 59.2
ATR0111G005 Amborella trichopoda HOM05D006591 ORTHO05D007861 3.1e-14 83.2 121 55.4
A09p24440 Brassica napus HOM05D006591 ORTHO05D007861 3.1e-14 83.2 99 61.6
PSO017G3262 Papaver somniferum HOM05D006591 ORTHO05D007861 5.3e-14 82.4 121 58.7
FAN07G2187 Fragaria x ananassa HOM05D006591 ORTHO05D007861 1.2e-13 81.3 100 66.0
Sp2g14340 Schrenkiella parvula HOM05D006591 ORTHO05D007861 1.2e-13 81.3 116 57.8
BcaB07g30669 Brassica carinata HOM05D006591 ORTHO05D007861 1.5e-13 80.9 116 55.2
Carub.0005s0239 Capsella rubella HOM05D006591 ORTHO05D007861 1.5e-13 80.9 117 56.4
Aqoxy3G00449 Aquilegia oxysepala HOM05D006591 ORTHO05D007861 2.6e-13 80.1 112 58.0
FAN17G0139 Fragaria x ananassa HOM05D006591 ORTHO05D007861 3.4e-13 79.7 108 62.0
Migut.E00061 Erythranthe guttata HOM05D006591 ORTHO05D007861 4.5e-13 79.3 102 64.7
CARHR145770 Cardamine hirsuta HOM05D006591 ORTHO05D007861 7.6e-13 78.6 81 56.8
FvH4_4g30470 Fragaria vesca HOM05D006591 ORTHO05D007861 7.6e-13 78.6 108 61.1
FAN12G1471 Fragaria x ananassa HOM05D006591 ORTHO05D007861 7.6e-13 78.6 108 61.1
PSO478G2874 Papaver somniferum HOM05D006591 ORTHO05D007861 2.2e-12 77.0 121 55.4
EL10Ac6g14958 Beta vulgaris HOM05D006591 ORTHO05D007861 2.9e-12 76.6 110 54.5
HPP92_018457 Vanilla planifolia HOM05D006591 ORTHO05D007861 6.5e-12 75.5 75 53.3
AL5G13180 Arabidopsis lyrata HOM05D006591 ORTHO05D007861 8.4e-12 75.1 81 51.9
Eucgr.G02461 Eucalyptus grandis HOM05D006591 ORTHO05D007861 1.4e-11 74.3 79 58.2
AagrBONN_evm.TU.Sc2ySwM_344.1136 Anthoceros agrestis HOM05D006591 ORTHO05D007861 3.2e-11 73.2 105 42.9
SEGI_35394 Sequoiadendron giganteum HOM05D006591 ORTHO05D007861 7.2e-11 72.0 77 49.4
AT2G03430 Arabidopsis thaliana HOM05D006591 ORTHO05D007861 1.6e-10 70.9 75 54.7
CSS0029980 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.6e-10 70.9 81 55.6
unitig_22.g5555 Utricularia gibba HOM05D006591 ORTHO05D007861 1.6e-10 70.9 82 52.4
Mapoly0001s0139 Marchantia polymorpha HOM05D006591 ORTHO05D007861 3.5e-10 69.7 100 42.0
Nitab4.5_0000334g0240 Nicotiana tabacum HOM05D006591 ORTHO05D007861 7.9e-10 68.6 97 46.4
Zm00001eb214530 Zea mays HOM05D006591 ORTHO05D007861 1.0e-09 68.2 109 58.7
Ah.02g126600 Amaranthus hybridus HOM05D006591 ORTHO05D007861 1.3e-09 67.8 114 41.2
EL10Ac6g14961 Beta vulgaris HOM05D027931 ORTHO05D007861 1.8e-09 67.4 102 39.2
Pp3c6_21850 Physcomitrium patens HOM05D006591 ORTHO05D007861 3.3e-08 63.2 101 40.6
Cre02.g117550 Chlamydomonas reinhardtii HOM05D006591 ORTHO05D007861 5.7e-08 62.4 98 36.7
CDE07G0054 Ceratophyllum demersum HOM05D006591 ORTHO05D007861 1.6e-07 60.8 111 50.5
BcaC02g07876 Brassica carinata HOM05D006591 ORTHO05D007861 2.2e-07 60.5 91 42.9
EL10Ac6g14960 Beta vulgaris HOM05D006591 ORTHO05D007861 1.8e-06 57.4 112 37.5
EL10Ac6g14964 Beta vulgaris HOM05D027931 ORTHO05D007861 3.1e-06 56.6 99 53.5
C06p01310 Brassica napus HOM05D006591 ORTHO05D007861 4.1e-06 56.2 123 36.6
Sed0000747 Sechium edule HOM05D006591 ORTHO05D007861 5.3e-06 55.8 85 42.4
Gohir.D10G139700 Gossypium hirsutum HOM05D006591 ORTHO05D007861 6.9e-06 55.5 63 55.6


User provided reference genes

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