Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.06LZL4 Arachis hypogaea HOM05D000590 ORTHO05D006825 1.5e-67 259.2 121 100.0
arahy.Tifrunner.gnm1.ann1.0G81PD Arachis hypogaea HOM05D000590 ORTHO05D006825 2.0e-30 136.0 64 98.4
VMungo0331G1406 Vigna mungo HOM05D000590 ORTHO05D000717 8.3e-29 130.6 85 74.1
Lalb_Chr10g0100491 Lupinus albus HOM05D000590 ORTHO05D006825 3.2e-28 128.6 63 93.7
Glyma.16G025000 Glycine max HOM05D000590 ORTHO05D006825 2.0e-27 125.9 64 90.6
Psat4g160760 Pisum sativum HOM05D000590 ORTHO05D006825 3.5e-27 125.2 64 90.6
Phvul.010G113800 Phaseolus vulgaris HOM05D000590 ORTHO05D006825 7.8e-27 124.0 64 89.1
TPR.G15352 Trifolium pratense HOM05D000590 ORTHO05D006825 1.7e-26 122.9 63 90.5
CANSAT56G2355 Cannabis sativa HOM05D000590 ORTHO05D006825 7.3e-25 117.5 64 82.8
PGR031G1800 Punica granatum HOM05D000590 ORTHO05D006825 7.3e-25 117.5 64 79.7
Actinidia28121 Actinidia chinensis HOM05D000590 ORTHO05D006825 2.1e-24 115.9 62 85.5
GSVIVG01027095001 Vitis vinifera HOM05D000590 ORTHO05D006825 2.1e-24 115.9 62 80.6
GSVIVG01027098001 Vitis vinifera HOM05D000590 ORTHO05D006825 2.1e-24 115.9 62 80.6
Lj7A501T47 Lonicera japonica HOM05D000590 ORTHO05D006825 2.8e-24 115.5 62 83.9
Lj3g0003332 Lotus japonicus HOM05D000590 ORTHO05D006825 3.6e-24 115.2 60 85.0
CSS0016052 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006825 4.7e-24 114.8 61 85.2
MSTRG.17339 Avicennia marina HOM05D000590 ORTHO05D006825 6.2e-24 114.4 62 82.3
MD01G1080100 Malus domestica HOM05D000590 ORTHO05D006825 1.0e-23 113.6 64 79.7
SalBow3G4091 Salvia bowleyana HOM05D000590 ORTHO05D006825 1.4e-23 113.2 62 80.6
Lsat_1_v5_gn_7_1240 Lactuca sativa HOM05D000590 ORTHO05D006825 1.8e-23 112.8 106 51.9
Gohir.A08G034400 Gossypium hirsutum HOM05D000590 ORTHO05D006825 3.1e-23 112.1 62 79.0
Gohir.D08G044900 Gossypium hirsutum HOM05D000590 ORTHO05D006825 3.1e-23 112.1 62 79.0
Gorai.004G043900 Gossypium raimondii HOM05D000590 ORTHO05D006825 3.1e-23 112.1 62 79.0
TAR375G0589 Trochodendron aralioides HOM05D000590 ORTHO05D006825 3.1e-23 112.1 62 82.3
vmacro12678 Vaccinium macrocarpon HOM05D000590 ORTHO05D001713 4.0e-23 111.7 84 63.1
SGA_v2.0_scaffold5G03015 Striga asiatica HOM05D000590 ORTHO05D006825 6.8e-23 110.9 64 71.9
RcHm_v2.0_Chr1g0359371 Rosa chinensis HOM05D000590 ORTHO05D006825 8.9e-23 110.5 64 78.1
Dinv35112 Davidia involucrata HOM05D000590 ORTHO05D006825 1.2e-22 110.2 58 86.2
Prupe.2G187500 Prunus persica HOM05D000590 ORTHO05D006825 2.0e-22 109.4 64 76.6
AUR62023466 Chenopodium quinoa HOM05D000590 ORTHO05D006825 2.6e-22 109.0 79 60.8
Duzib133G1228 Durio zibethinus HOM05D000590 ORTHO05D006825 2.6e-22 109.0 62 82.3
Rhsim01G0172200 Rhododendron simsii HOM05D000590 ORTHO05D006825 2.6e-22 109.0 62 77.4
FvH4_7g16360 Fragaria vesca HOM05D000590 ORTHO05D006825 3.4e-22 108.6 64 76.6
FAN01G2486 Fragaria x ananassa HOM05D000590 ORTHO05D006825 4.4e-22 108.2 64 76.6
FAN06G0495 Fragaria x ananassa HOM05D000590 ORTHO05D006825 4.4e-22 108.2 64 76.6
FAN10G1076 Fragaria x ananassa HOM05D000590 ORTHO05D006825 4.4e-22 108.2 64 76.6
FAN10G3131 Fragaria x ananassa HOM05D000590 ORTHO05D006825 4.4e-22 108.2 64 76.6
Haze_15659 Corylus avellana HOM05D000590 ORTHO05D006825 7.5e-22 107.5 63 79.4
TWI59G0780 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 1.3e-21 106.7 63 74.6
EL10Ac1g00275 Beta vulgaris HOM05D000590 ORTHO05D006825 1.7e-21 106.3 63 73.0
Migut.B01870 Erythranthe guttata HOM05D000590 ORTHO05D006825 1.7e-21 106.3 62 74.2
FAN06G0513 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.7e-21 106.3 64 75.0
Solyc01g095870.3 Solanum lycopersicum HOM05D000590 ORTHO05D006825 2.2e-21 105.9 63 71.4
Sopen01g039610 Solanum pennellii HOM05D000590 ORTHO05D006825 2.2e-21 105.9 63 71.4
PGSC0003DMG400000222 Solanum tuberosum HOM05D000590 ORTHO05D006825 2.2e-21 105.9 63 71.4
Ciclev10023676m.g Citrus clementina HOM05D000590 ORTHO05D006825 3.7e-21 105.1 62 75.8
CAN.G986.8 Capsicum annuum HOM05D000590 ORTHO05D006825 4.9e-21 104.8 63 73.0
CiPaw.02G040500 Carya illinoinensis HOM05D000590 ORTHO05D006825 4.9e-21 104.8 58 81.0
Peaxi162Scf00786g00323 Petunia axillaris HOM05D000590 ORTHO05D006825 4.9e-21 104.8 64 68.8
Oeu015362.1 Olea europaea HOM05D000590 ORTHO05D006825 8.3e-21 104.0 62 74.2
QL04p061137 Quercus lobata HOM05D000590 ORTHO05D006825 8.3e-21 104.0 63 76.2
TWI14G0815 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 8.3e-21 104.0 63 68.3
Aqoxy5G04231 Aquilegia oxysepala HOM05D000590 ORTHO05D006825 1.4e-20 103.2 62 77.4
Cfa003800 Carpinus fangiana HOM05D000590 ORTHO05D001713 1.4e-20 103.2 63 76.2
AUR62004487 Chenopodium quinoa HOM05D000590 ORTHO05D006825 1.4e-20 103.2 62 71.0
Cc02_g39290 Coffea canephora HOM05D000590 ORTHO05D006825 1.4e-20 103.2 62 72.6
Manes.01G246600 Manihot esculenta HOM05D000590 ORTHO05D006825 2.4e-20 102.4 62 74.2
Nitab4.5_0000838g0230 Nicotiana tabacum HOM05D000590 ORTHO05D006825 4.1e-20 101.7 64 67.2
Nitab4.5_0004999g0020 Nicotiana tabacum HOM05D000590 ORTHO05D006825 4.1e-20 101.7 64 67.2
Duzib138G1692 Durio zibethinus HOM05D000590 ORTHO05D006825 5.4e-20 101.3 63 79.4
MBI06_g08454_MAGBIO Magnolia biondii HOM05D000590 ORTHO05D006825 7.0e-20 100.9 62 72.6
Cpa.g.sc96.9 Carica papaya HOM05D000590 ORTHO05D006825 9.2e-20 100.5 62 75.8
HanXRQChr04g0120221 Helianthus annuus HOM05D000590 ORTHO05D006825 9.2e-20 100.5 62 66.1
CDE02G3030 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 1.2e-19 100.1 62 69.4
Sabra14G0072100 Salix brachista HOM05D000590 ORTHO05D001713 2.0e-19 99.4 64 70.3
Sc26g0000670 Simmondsia chinensis HOM05D000590 ORTHO05D006825 2.0e-19 99.4 62 69.4
Potri.014G098300 Populus trichocarpa HOM05D000590 ORTHO05D006825 3.5e-19 98.6 65 70.8
Migut.N01547 Erythranthe guttata HOM05D000590 ORTHO05D006825 4.6e-19 98.2 62 67.7
Eucgr.D02371 Eucalyptus grandis HOM05D000590 ORTHO05D006825 6.0e-19 97.8 58 74.1
CsaV3_6G007130 Cucumis sativus L. HOM05D000590 ORTHO05D006825 1.0e-18 97.1 64 70.3
THA.LOC104817360 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 1.0e-18 97.1 64 73.4
Nn2g14772 Nelumbo nucifera HOM05D000590 ORTHO05D006825 1.3e-18 96.7 63 71.4
MELO3C022415.2 Cucumis melo HOM05D000590 ORTHO05D006825 1.7e-18 96.3 64 70.3
ATR0602G065 Amborella trichopoda HOM05D000590 ORTHO05D006825 3.0e-18 95.5 62 64.5
AT3G61730 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 6.6e-18 94.4 64 68.8
PSO782G3674 Papaver somniferum HOM05D000590 ORTHO05D006825 8.6e-18 94.0 66 68.2
Thhalv10006430m.g Eutrema salsugineum HOM05D000590 ORTHO05D006825 1.1e-17 93.6 64 67.2
BraA04t15812Z Brassica rapa HOM05D000590 ORTHO05D006825 1.5e-17 93.2 64 68.8
PSO478G0645 Papaver somniferum HOM05D000590 ORTHO05D006825 1.9e-17 92.8 66 68.2
SHI13291 Sapria himalayana HOM05D000590 ORTHO05D006825 1.9e-17 92.8 65 66.2
AL5G44280 Arabidopsis lyrata HOM05D000590 ORTHO05D006825 2.5e-17 92.4 64 67.2
Sed0003230 Sechium edule HOM05D000590 ORTHO05D006825 2.5e-17 92.4 64 65.6
THA.LOC104802069 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 2.5e-17 92.4 64 70.3
CARHR172060 Cardamine hirsuta HOM05D000590 ORTHO05D006825 3.3e-17 92.0 64 67.2
CDE02G2715 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 3.3e-17 92.0 62 62.9
Sp5g01640 Schrenkiella parvula HOM05D000590 ORTHO05D006825 3.3e-17 92.0 64 65.6
PSO063G6641 Papaver somniferum HOM05D000590 ORTHO05D006825 4.3e-17 91.7 64 68.8
AT5G36000 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 5.6e-17 91.3 64 65.6
SEGI_01413 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 5.6e-17 91.3 62 61.3
Aa31LG10G15730 Aethionema arabicum HOM05D000590 ORTHO05D001713 7.3e-17 90.9 64 67.2
FAN03G1068 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.2e-16 90.1 54 72.2
Oeu004946.1 Olea europaea HOM05D000590 ORTHO05D006825 1.2e-16 90.1 62 66.1
BcaB02g08143 Brassica carinata HOM05D000590 ORTHO05D006825 2.1e-16 89.4 62 67.7
SEGI_08329 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 3.6e-16 88.6 62 59.7
BolC6t37952H Brassica oleracea HOM05D000590 ORTHO05D006825 6.2e-16 87.8 64 62.5
Ca_23539_v3 Cicer arietinum L. HOM05D000590 ORTHO05D006825 8.9e-15 84.0 73 56.2
Medtr8g027735 Medicago truncatula HOM05D000590 ORTHO05D006825 2.6e-14 82.4 38 94.7
BcaC02g10247 Brassica carinata HOM05D000590 ORTHO05D006825 1.7e-13 79.7 64 65.6
C04p31120 Brassica napus HOM05D000590 ORTHO05D006825 1.7e-13 79.7 64 65.6
CBR_g71803 Chara braunii HOM05D000590 ORTHO05D006825 5.4e-12 74.7 61 55.7
CBR_g49078 Chara braunii HOM05D000590 ORTHO05D006825 2.1e-11 72.8 61 54.1
Ah.05g179600 Amaranthus hybridus HOM05D000590 ORTHO05D006825 3.5e-11 72.0 39 76.9
Pp3c6_8570 Physcomitrium patens HOM05D000590 ORTHO05D006825 6.0e-11 71.2 61 49.2
HPP92_002828 Vanilla planifolia HOM05D000590 ORTHO05D006825 6.0e-11 71.2 84 45.2
Atru.chr5.661 Acer truncatum HOM05D000590 ORTHO05D006825 1.5e-09 66.6 61 55.7
SMO164G0232 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 2.5e-09 65.9 63 44.4
DCAR_006973 Daucus carota HOM05D000590 ORTHO05D006825 3.3e-09 65.5 35 74.3
Thecc.01G343200 Theobroma cacao HOM05D000590 ORTHO05D006825 7.3e-09 64.3 35 77.1
COL.COLO4_06291 Corchorus olitorius HOM05D000590 ORTHO05D000717 1.2e-08 63.5 35 77.1
SMO200G0118 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 2.1e-08 62.8 63 42.9
ECA236G1053 Erigeron canadensis HOM05D000590 ORTHO05D001713 2.8e-08 62.4 35 65.7
TWI23G0685 Tripterygium wilfordii HOM05D000354 ORTHO05D000717 2.3e-07 59.3 31 77.4
A04p00950 Brassica napus HOM05D000590 ORTHO05D006825 3.4e-06 55.5 47 53.2


User provided reference genes

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