Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.045FSF Arachis hypogaea HOM05D033157 ORTHO05D086115 2.2e-52 208.8 110 100.0
arahy.Tifrunner.gnm1.ann1.VVI86N Arachis hypogaea HOM05D033157 ORTHO05D087449 2.1e-39 165.6 107 87.9
arahy.Tifrunner.gnm1.ann1.63T23V Arachis hypogaea HOM05D000501 ORTHO05D000376 9.6e-16 87.0 55 80.0
arahy.Tifrunner.gnm1.ann1.DT3E7E Arachis hypogaea HOM05D000106 ORTHO05D013005 1.4e-14 83.2 69 69.6
arahy.Tifrunner.gnm1.ann1.42G4ZR Arachis hypogaea HOM05D021356 ORTHO05D013005 1.8e-14 82.8 50 92.0
arahy.Tifrunner.gnm1.ann1.77EU82 Arachis hypogaea HOM05D000106 ORTHO05D013005 2.4e-14 82.4 50 92.0
arahy.Tifrunner.gnm1.ann1.XXY8CF Arachis hypogaea HOM05D033157 ORTHO05D082679 2.1e-10 69.3 51 78.4
arahy.Tifrunner.gnm1.ann1.CP0U6E Arachis hypogaea HOM05D000501 ORTHO05D000376 1.0e-09 67.0 37 89.2
arahy.Tifrunner.gnm1.ann1.ZJGI0U Arachis hypogaea HOM05D000501 ORTHO05D000376 1.0e-09 67.0 37 89.2
vmacro19095 Vaccinium macrocarpon HOM05D000501 ORTHO05D000376 3.6e-07 58.5 37 73.0
arahy.Tifrunner.gnm1.ann1.8PIL24 Arachis hypogaea HOM05D003988 ORTHO05D014448 4.8e-07 58.2 51 74.5
arahy.Tifrunner.gnm1.ann1.FSD85R Arachis hypogaea HOM05D003988 ORTHO05D014448 4.8e-07 58.2 50 76.0
arahy.Tifrunner.gnm1.ann1.JLHH9C Arachis hypogaea HOM05D000501 ORTHO05D000376 6.2e-07 57.8 43 65.1
arahy.Tifrunner.gnm1.ann1.SQ63RV Arachis hypogaea HOM05D003988 ORTHO05D014448 6.2e-07 57.8 68 57.4
Actinidia25501 Actinidia chinensis HOM05D000501 ORTHO05D000376 8.1e-07 57.4 37 67.6
arahy.Tifrunner.gnm1.ann1.P0P2QF Arachis hypogaea HOM05D000501 ORTHO05D000376 8.1e-07 57.4 43 62.8
Actinidia39282 Actinidia chinensis HOM05D000501 ORTHO05D000376 1.1e-06 57.0 37 64.9
arahy.Tifrunner.gnm1.ann1.W7NNEU Arachis hypogaea HOM05D003988 ORTHO05D014448 1.1e-06 57.0 50 74.0
Migut.D01166 Erythranthe guttata HOM05D000501 ORTHO05D000376 1.1e-06 57.0 37 70.3
TPR.G29195 Trifolium pratense HOM05D000501 ORTHO05D000376 1.1e-06 57.0 47 63.8
Actinidia18278 Actinidia chinensis HOM05D000501 ORTHO05D000376 1.4e-06 56.6 37 67.6
arahy.Tifrunner.gnm1.ann1.PAK5F5 Arachis hypogaea HOM05D003988 ORTHO05D014448 1.4e-06 56.6 50 74.0
arahy.Tifrunner.gnm1.ann1.WHR9G5 Arachis hypogaea HOM05D003988 ORTHO05D014448 1.4e-06 56.6 50 74.0
CSS0008067 Camellia sinensis var. sinensis HOM05D000501 ORTHO05D000376 1.4e-06 56.6 37 70.3
CSS0045221 Camellia sinensis var. sinensis HOM05D000501 ORTHO05D000376 1.4e-06 56.6 37 70.3
Cc04_g05580 Coffea canephora HOM05D000501 ORTHO05D000376 1.8e-06 56.2 43 67.4
Oeu012861.1 Olea europaea HOM05D000501 ORTHO05D000376 1.8e-06 56.2 37 70.3
CSS0039845 Camellia sinensis var. sinensis HOM05D000501 ORTHO05D000376 3.1e-06 55.5 37 64.9
COL.COLO4_37287 Corchorus olitorius HOM05D000501 ORTHO05D000376 3.1e-06 55.5 37 67.6
Medtr3g098320 Medicago truncatula HOM05D000501 ORTHO05D000376 3.1e-06 55.5 47 61.7
MSTRG.22824 Avicennia marina HOM05D000501 ORTHO05D000376 4.0e-06 55.1 37 70.3
Migut.D01163 Erythranthe guttata HOM05D000501 ORTHO05D000376 4.0e-06 55.1 43 62.8
Lalb_Chr07g0183931 Lupinus albus HOM05D000501 ORTHO05D000376 4.0e-06 55.1 36 72.2
VMungo0251G0472 Vigna mungo HOM05D000501 ORTHO05D000376 4.0e-06 55.1 36 69.4
Nitab4.5_0005215g0040 Nicotiana tabacum HOM05D000501 ORTHO05D000376 5.3e-06 54.7 37 62.2
CAN.G1089.8 Capsicum annuum HOM05D000501 ORTHO05D000376 6.9e-06 54.3 37 62.2
Lalb_Chr12g0202681 Lupinus albus HOM05D000501 ORTHO05D000376 6.9e-06 54.3 36 72.2
arahy.Tifrunner.gnm1.ann1.N2D0NW Arachis hypogaea HOM05D003988 ORTHO05D014448 9.0e-06 53.9 49 75.5
arahy.Tifrunner.gnm1.ann1.SX57NQ Arachis hypogaea HOM05D003988 ORTHO05D014448 9.0e-06 53.9 62 58.1
Lj4g0019193 Lotus japonicus HOM05D000501 ORTHO05D000376 9.0e-06 53.9 36 69.4
Medtr8g095520 Medicago truncatula HOM05D000501 ORTHO05D000376 9.0e-06 53.9 51 52.9
TPR.G7806 Trifolium pratense HOM05D000501 ORTHO05D000376 9.0e-06 53.9 47 57.4


User provided reference genes

Program Settings